Protein : Qrob_P0714440.2 Q. robur
Protein Identifier  ? Qrob_P0714440.2 Organism . Name  Quercus robur
Score  98.2 Score Type  egn
Protein Description  (M=1) PTHR11946//PTHR11946:SF65 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 328  
Kegg Orthology  K01874
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004812 aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO:0006418 tRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO:0004825 methionine-tRNA ligase activity Catalysis of the reaction: ATP + L-methionine + tRNA(Met) = AMP + diphosphate + L-methionyl-tRNA(Met).
GO:0006431 methionyl-tRNA aminoacylation The process of coupling methionine to methionyl-tRNA, catalyzed by methionyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|csv:101210109 1 271 + 271 Gaps:9 39.44 611 78.84 3e-100 methionine--tRNA ligase-like
blastp_kegg lcl|cmo:103501636 1 327 + 327 Gaps:8 48.12 611 73.81 3e-97 probable methionine--tRNA ligase mitochondrial
blastp_kegg lcl|crb:CARUB_v10016854mg 1 273 + 273 Gaps:3 38.99 613 75.73 1e-93 hypothetical protein
blastp_kegg lcl|gmx:100814644 1 327 + 327 Gaps:20 47.77 605 76.82 2e-92 methionine--tRNA ligase mitochondrial-like
blastp_kegg lcl|ath:AT3G55400 1 273 + 273 Gaps:9 45.22 533 76.76 2e-92 OVA1 methionyl-tRNA synthetase
blastp_kegg lcl|cic:CICLE_v10030995mg 1 306 + 306 Gaps:8 44.98 607 79.12 3e-92 hypothetical protein
blastp_kegg lcl|cit:102613489 1 306 + 306 Gaps:8 44.98 607 79.12 3e-92 methionine--tRNA ligase mitochondrial-like
blastp_kegg lcl|gmx:100818412 1 327 + 327 Gaps:20 47.77 605 76.82 7e-92 methionine--tRNA ligase mitochondrial-like
blastp_kegg lcl|cam:101490711 1 327 + 327 Gaps:17 47.69 606 77.51 6e-91 methionine--tRNA ligase-like
blastp_kegg lcl|pop:POPTR_0010s21430g 1 327 + 327 Gaps:10 50.16 610 72.88 9e-91 POPTRDRAFT_1092152 methionyl-tRNA synthetase family protein
blastp_pdb 2d54_A 72 223 + 152 Gaps:7 31.67 502 45.28 2e-39 mol:protein length:502 Methionyl-tRNA synthetase
blastp_pdb 1a8h_A 72 223 + 152 Gaps:7 31.80 500 45.28 2e-39 mol:protein length:500 METHIONYL-TRNA SYNTHETASE
blastp_pdb 2d5b_A 72 223 + 152 Gaps:7 31.80 500 45.28 2e-39 mol:protein length:500 Methionyl-tRNA Synthetase
blastp_pdb 1woy_A 72 223 + 152 Gaps:7 31.80 500 45.28 2e-39 mol:protein length:500 Methionyl-tRNA synthetase
blastp_pdb 2ct8_B 72 201 + 130 none 26.16 497 53.08 1e-38 mol:protein length:497 Methionyl-tRNA synthetase
blastp_pdb 2ct8_A 72 201 + 130 none 26.16 497 53.08 1e-38 mol:protein length:497 Methionyl-tRNA synthetase
blastp_pdb 2csx_B 72 201 + 130 none 26.16 497 53.08 1e-38 mol:protein length:497 Methionyl-tRNA synthetase
blastp_pdb 2csx_A 72 201 + 130 none 26.16 497 53.08 1e-38 mol:protein length:497 Methionyl-tRNA synthetase
blastp_pdb 3kfl_A 72 200 + 129 none 22.87 564 44.19 2e-33 mol:protein length:564 Methionyl-tRNA synthetase
blastp_pdb 2x1m_A 68 227 + 160 Gaps:12 32.82 524 39.53 7e-29 mol:protein length:524 METHIONYL-TRNA SYNTHETASE
blastp_uniprot_sprot sp|Q8Z068|SYM_NOSS1 72 228 + 157 Gaps:9 31.32 530 50.00 6e-47 Methionine--tRNA ligase OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN metG PE 3 SV 1
blastp_uniprot_sprot sp|Q55729|SYM_SYNY3 72 201 + 130 none 24.44 532 59.23 3e-46 Methionine--tRNA ligase OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN metG PE 3 SV 1
blastp_uniprot_sprot sp|P59081|SYM_THEEB 72 224 + 153 Gaps:9 30.62 529 53.09 5e-46 Methionine--tRNA ligase OS Thermosynechococcus elongatus (strain BP-1) GN metG PE 3 SV 1
blastp_uniprot_sprot sp|O33925|SYM_THEMA 72 200 + 129 none 20.51 629 53.49 4e-43 Methionine--tRNA ligase OS Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN metG PE 3 SV 1
blastp_uniprot_sprot sp|Q8XHG1|SYM_CLOPE 70 200 + 131 none 20.31 645 52.67 2e-40 Methionine--tRNA ligase OS Clostridium perfringens (strain 13 / Type A) GN metG PE 3 SV 1
blastp_uniprot_sprot sp|Q8RDD1|SYM_THETN 72 225 + 154 Gaps:11 25.24 638 45.96 2e-40 Methionine--tRNA ligase OS Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN metG PE 3 SV 1
blastp_uniprot_sprot sp|P23395|SYM_THET8 72 223 + 152 Gaps:7 25.73 618 45.28 9e-39 Methionine--tRNA ligase OS Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN metG PE 1 SV 2
blastp_uniprot_sprot sp|Q899D9|SYM_CLOTE 72 200 + 129 none 20.12 641 50.39 1e-38 Methionine--tRNA ligase OS Clostridium tetani (strain Massachusetts / E88) GN metG PE 3 SV 1
blastp_uniprot_sprot sp|Q9F2I9|SYM_STRCO 66 219 + 154 Gaps:1 28.81 538 43.23 2e-38 Methionine--tRNA ligase OS Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN metG PE 3 SV 1
blastp_uniprot_sprot sp|Q9PP85|SYM_CAMJE 74 200 + 127 none 20.22 628 49.61 5e-38 Methionine--tRNA ligase OS Campylobacter jejuni subsp. jejuni serotype O:2 (strain NCTC 11168) GN metG PE 3 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 154 165 12 PR01041 "KEGG:00450+6.1.1.10","KEGG:00970+6.1.1.10","Reactome:REACT_71" Methionyl-tRNA synthetase signature IPR014758
PRINTS 106 120 15 PR01041 "KEGG:00450+6.1.1.10","KEGG:00970+6.1.1.10","Reactome:REACT_71" Methionyl-tRNA synthetase signature IPR014758
PRINTS 74 87 14 PR01041 "KEGG:00450+6.1.1.10","KEGG:00970+6.1.1.10","Reactome:REACT_71" Methionyl-tRNA synthetase signature IPR014758
Gene3D 70 199 130 G3DSA:3.40.50.620 none none IPR014729
SUPERFAMILY 69 242 174 SSF52374 none none none
PANTHER 64 204 141 PTHR11946:SF65 none none none
Pfam 73 201 129 PF09334 "Reactome:REACT_71" tRNA synthetases class I (M) IPR015413
PANTHER 64 204 141 PTHR11946 none none none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9

0 Targeting