Protein : Qrob_P0710040.2 Q. robur
Protein Identifier  ? Qrob_P0710040.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) K03265 - peptide chain release factor eRF subunit 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 458  
Kegg Orthology  K03265
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0006415 translational termination The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).
GO:0016149 translation release factor activity, codon specific A translation release factor that is specific for one or more particular termination codons; acts at the ribosomal A-site and require polypeptidyl-tRNA at the P-site.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_047036 1 414 + 414 Gaps:23 100.00 437 83.30 0.0 Eukaryotic release factor 1-3
blastp_kegg lcl|csv:101224002 1 414 + 414 Gaps:24 100.00 436 83.94 0.0 eukaryotic peptide chain release factor subunit 1-3-like
blastp_kegg lcl|csv:101203556 1 414 + 414 Gaps:24 100.00 436 83.94 0.0 eukaryotic peptide chain release factor subunit 1-3-like
blastp_kegg lcl|vvi:100248954 1 414 + 414 Gaps:23 100.00 437 82.84 0.0 eukaryotic peptide chain release factor subunit 1-3-like
blastp_kegg lcl|pper:PRUPE_ppa005931mg 1 414 + 414 Gaps:23 100.00 437 82.84 0.0 hypothetical protein
blastp_kegg lcl|cmo:103498902 1 414 + 414 Gaps:24 100.00 436 83.72 0.0 eukaryotic peptide chain release factor subunit 1-3-like
blastp_kegg lcl|csv:101218139 1 414 + 414 Gaps:24 100.00 436 83.94 0.0 eukaryotic peptide chain release factor subunit 1-3-like
blastp_kegg lcl|cmo:103489959 1 414 + 414 Gaps:24 100.00 436 83.72 0.0 eukaryotic peptide chain release factor subunit 1-3
blastp_kegg lcl|pmum:103330410 1 414 + 414 Gaps:23 100.00 437 82.61 0.0 eukaryotic peptide chain release factor subunit 1-3
blastp_kegg lcl|pvu:PHAVU_001G097700g 1 414 + 414 Gaps:23 100.00 437 82.61 0.0 hypothetical protein
blastp_pdb 1dt9_A 3 411 + 409 Gaps:25 98.40 437 67.91 0.0 mol:protein length:437 PROTEIN (EUKARYOTIC PEPTIDE CHAIN RELEASE FAC
blastp_pdb 3e1y_D 3 411 + 409 Gaps:25 95.34 451 67.91 0.0 mol:protein length:451 Eukaryotic peptide chain release factor subun
blastp_pdb 3e1y_C 3 411 + 409 Gaps:25 95.34 451 67.91 0.0 mol:protein length:451 Eukaryotic peptide chain release factor subun
blastp_pdb 3e1y_B 3 411 + 409 Gaps:25 95.34 451 67.91 0.0 mol:protein length:451 Eukaryotic peptide chain release factor subun
blastp_pdb 3e1y_A 3 411 + 409 Gaps:25 95.34 451 67.91 0.0 mol:protein length:451 Eukaryotic peptide chain release factor subun
blastp_pdb 3e20_K 7 414 + 408 Gaps:29 97.28 441 54.31 5e-160 mol:protein length:441 Eukaryotic peptide chain release factor subun
blastp_pdb 3e20_H 7 414 + 408 Gaps:29 97.28 441 54.31 5e-160 mol:protein length:441 Eukaryotic peptide chain release factor subun
blastp_pdb 3e20_B 7 414 + 408 Gaps:29 97.28 441 54.31 5e-160 mol:protein length:441 Eukaryotic peptide chain release factor subun
blastp_pdb 3e20_C 7 414 + 408 Gaps:29 97.28 441 54.31 5e-160 mol:protein length:441 Eukaryotic peptide chain release factor subun
blastp_pdb 2lgt_A 3 139 + 137 none 95.14 144 76.64 4e-71 mol:protein length:144 Eukaryotic peptide chain release factor subun
blastp_uniprot_sprot sp|P35614|ERF1Z_ARATH 1 414 + 414 Gaps:25 100.00 435 78.85 0.0 Eukaryotic peptide chain release factor subunit 1-3 OS Arabidopsis thaliana GN ERF1-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LPV8|ERF1Y_ARATH 4 414 + 411 Gaps:24 99.77 434 77.37 0.0 Eukaryotic peptide chain release factor subunit 1-2 OS Arabidopsis thaliana GN ERF1-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q39097|ERF1X_ARATH 1 412 + 412 Gaps:25 99.31 436 76.21 0.0 Eukaryotic peptide chain release factor subunit 1-1 OS Arabidopsis thaliana GN ERF1-1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9GR88|ERF1_POLMI 7 401 + 395 Gaps:25 95.63 435 68.99 0.0 Eukaryotic peptide chain release factor subunit 1 OS Polyandrocarpa misakiensis GN ERF1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5U2Q7|ERF1_RAT 3 411 + 409 Gaps:25 98.40 437 67.91 0.0 Eukaryotic peptide chain release factor subunit 1 OS Rattus norvegicus GN Etf1 PE 2 SV 3
blastp_uniprot_sprot sp|P62497|ERF1_RABIT 3 411 + 409 Gaps:25 98.40 437 67.91 0.0 Eukaryotic peptide chain release factor subunit 1 OS Oryctolagus cuniculus GN ETF1 PE 1 SV 3
blastp_uniprot_sprot sp|Q8BWY3|ERF1_MOUSE 3 411 + 409 Gaps:25 98.40 437 67.91 0.0 Eukaryotic peptide chain release factor subunit 1 OS Mus musculus GN Etf1 PE 1 SV 4
blastp_uniprot_sprot sp|P62496|ERF1_MESAU 3 411 + 409 Gaps:25 98.40 437 67.91 0.0 Eukaryotic peptide chain release factor subunit 1 OS Mesocricetus auratus GN ETF1 PE 1 SV 3
blastp_uniprot_sprot sp|P62495|ERF1_HUMAN 3 411 + 409 Gaps:25 98.40 437 67.91 0.0 Eukaryotic peptide chain release factor subunit 1 OS Homo sapiens GN ETF1 PE 1 SV 3
blastp_uniprot_sprot sp|Q0VCX5|ERF1_BOVIN 3 411 + 409 Gaps:25 98.40 437 67.91 0.0 Eukaryotic peptide chain release factor subunit 1 OS Bos taurus GN ETF1 PE 2 SV 3

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 256 412 157 G3DSA:3.30.1330.30 none none IPR029064
SUPERFAMILY 142 253 112 SSF53137 none none none
Gene3D 142 255 114 G3DSA:3.30.420.60 none none none
SUPERFAMILY 6 140 135 SSF55481 none none IPR024049
Pfam 144 255 112 PF03464 none eRF1 domain 2 IPR005141
PANTHER 1 416 416 PTHR10113:SF7 none none none
Pfam 8 139 132 PF03463 none eRF1 domain 1 IPR005140
Gene3D 27 131 105 G3DSA:3.30.960.10 none none IPR024049
SUPERFAMILY 255 397 143 SSF55315 none none IPR029064
Pfam 258 395 138 PF03465 none eRF1 domain 3 IPR005142
PANTHER 1 416 416 PTHR10113 none none IPR004403

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5

0 Targeting