Protein : Qrob_P0705420.2 Q. robur
Protein Identifier  ? Qrob_P0705420.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) 2.7.4.6 - Nucleoside-diphosphate kinase. Code Enzyme  EC:2.7.4.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 149  
Kegg Orthology  K00940
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0004550 nucleoside diphosphate kinase activity Catalysis of the reaction: ATP + nucleoside diphosphate = ADP + nucleoside triphosphate.
GO:0006165 nucleoside diphosphate phosphorylation The process of introducing a phosphate group into a nucleoside diphosphate to produce a nucleoside triphosphate.
GO:0006183 GTP biosynthetic process The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate.
GO:0006228 UTP biosynthetic process The chemical reactions and pathways resulting in the formation of UTP, uridine (5'-)triphosphate.
GO:0006241 CTP biosynthetic process The chemical reactions and pathways resulting in the formation of CTP, cytidine 5'-triphosphate.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0658170 1 148 + 148 none 100.00 148 90.54 4e-95 nucleoside diphosphate kinase putative (EC:2.7.4.6)
blastp_kegg lcl|pper:PRUPE_ppa012936mg 1 148 + 148 none 100.00 148 89.19 5e-95 hypothetical protein
blastp_kegg lcl|fve:101312573 1 148 + 148 none 100.00 148 90.54 1e-94 nucleoside diphosphate kinase 1-like
blastp_kegg lcl|pvu:PHAVU_010G045400g 2 148 + 147 none 98.66 149 89.80 5e-94 hypothetical protein
blastp_kegg lcl|brp:103832567 1 148 + 148 none 100.00 148 87.84 1e-93 nucleoside diphosphate kinase 1
blastp_kegg lcl|pmum:103331674 1 148 + 148 none 100.00 148 87.84 1e-93 nucleoside diphosphate kinase 1
blastp_kegg lcl|eus:EUTSA_v10029044mg 1 148 + 148 none 100.00 148 89.86 1e-93 hypothetical protein
blastp_kegg lcl|pxb:103962247 1 148 + 148 none 100.00 148 87.16 1e-93 nucleoside diphosphate kinase 1
blastp_kegg lcl|mdm:103439015 1 148 + 148 none 100.00 148 87.16 1e-93 nucleoside diphosphate kinase 1
blastp_kegg lcl|brp:103839150 1 148 + 148 none 100.00 148 88.51 4e-93 nucleoside diphosphate kinase 1-like
blastp_pdb 1u8w_F 1 148 + 148 none 99.33 149 85.81 1e-92 mol:protein length:149 Nucleoside diphosphate kinase I
blastp_pdb 1u8w_E 1 148 + 148 none 99.33 149 85.81 1e-92 mol:protein length:149 Nucleoside diphosphate kinase I
blastp_pdb 1u8w_D 1 148 + 148 none 99.33 149 85.81 1e-92 mol:protein length:149 Nucleoside diphosphate kinase I
blastp_pdb 1u8w_C 1 148 + 148 none 99.33 149 85.81 1e-92 mol:protein length:149 Nucleoside diphosphate kinase I
blastp_pdb 1u8w_B 1 148 + 148 none 99.33 149 85.81 1e-92 mol:protein length:149 Nucleoside diphosphate kinase I
blastp_pdb 1u8w_A 1 148 + 148 none 99.33 149 85.81 1e-92 mol:protein length:149 Nucleoside diphosphate kinase I
blastp_pdb 1pku_L 1 148 + 148 none 98.67 150 73.65 3e-80 mol:protein length:150 Nucleoside Diphosphate Kinase I
blastp_pdb 1pku_K 1 148 + 148 none 98.67 150 73.65 3e-80 mol:protein length:150 Nucleoside Diphosphate Kinase I
blastp_pdb 1pku_J 1 148 + 148 none 98.67 150 73.65 3e-80 mol:protein length:150 Nucleoside Diphosphate Kinase I
blastp_pdb 1pku_I 1 148 + 148 none 98.67 150 73.65 3e-80 mol:protein length:150 Nucleoside Diphosphate Kinase I
blastp_uniprot_sprot sp|Q39839|NDK1_SOYBN 2 148 + 147 none 98.66 149 87.07 2e-92 Nucleoside diphosphate kinase 1 OS Glycine max PE 1 SV 1
blastp_uniprot_sprot sp|P39207|NDK1_ARATH 1 148 + 148 none 99.33 149 85.81 4e-92 Nucleoside diphosphate kinase 1 OS Arabidopsis thaliana GN NDPK1 PE 1 SV 1
blastp_uniprot_sprot sp|Q56E62|NDK1_TOBAC 1 148 + 148 none 100.00 148 86.49 1e-91 Nucleoside diphosphate kinase 1 OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|P47922|NDK1_PEA 2 148 + 147 none 98.66 149 86.39 2e-91 Nucleoside diphosphate kinase 1 OS Pisum sativum GN NDPK1 PE 1 SV 1
blastp_uniprot_sprot sp|P47920|NDKB_FLABI 1 148 + 148 none 100.00 148 85.81 3e-91 Nucleoside diphosphate kinase B OS Flaveria bidentis PE 2 SV 1
blastp_uniprot_sprot sp|Q9M7P6|NDK_CAPAN 1 148 + 148 none 100.00 148 84.46 3e-90 Nucleoside diphosphate kinase OS Capsicum annuum PE 2 SV 1
blastp_uniprot_sprot sp|O81372|NDK1_MESCR 1 148 + 148 none 100.00 148 85.14 3e-90 Nucleoside diphosphate kinase 1 OS Mesembryanthemum crystallinum GN NDKP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q96559|NDK_HELAN 1 148 + 148 none 100.00 148 84.46 5e-90 Nucleoside diphosphate kinase OS Helianthus annuus PE 2 SV 1
blastp_uniprot_sprot sp|P47919|NDKA_FLABI 1 148 + 148 none 100.00 148 83.78 4e-89 Nucleoside diphosphate kinase A OS Flaveria bidentis PE 2 SV 1
blastp_uniprot_sprot sp|Q02254|NDK1_SPIOL 1 148 + 148 none 100.00 148 83.11 7e-89 Nucleoside diphosphate kinase 1 OS Spinacia oleracea GN NDPK1 PE 2 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 148 148 PTHR11349 none none none
PANTHER 1 148 148 PTHR11349:SF46 none none none
SMART 1 138 138 SM00562 "KEGG:00230+2.7.4.6","KEGG:00240+2.7.4.6","MetaCyc:PWY-6545","MetaCyc:PWY-7176","MetaCyc:PWY-7184","MetaCyc:PWY-7187","MetaCyc:PWY-7197","MetaCyc:PWY-7198","MetaCyc:PWY-7205","MetaCyc:PWY-7210","MetaCyc:PWY-7220","MetaCyc:PWY-7221","MetaCyc:PWY-7222","MetaCyc:PWY-7224","MetaCyc:PWY-7226","MetaCyc:PWY-7227" none IPR001564
Gene3D 1 148 148 G3DSA:3.30.70.141 "KEGG:00230+2.7.4.6","KEGG:00240+2.7.4.6","MetaCyc:PWY-6545","MetaCyc:PWY-7176","MetaCyc:PWY-7184","MetaCyc:PWY-7187","MetaCyc:PWY-7197","MetaCyc:PWY-7198","MetaCyc:PWY-7205","MetaCyc:PWY-7210","MetaCyc:PWY-7220","MetaCyc:PWY-7221","MetaCyc:PWY-7222","MetaCyc:PWY-7224","MetaCyc:PWY-7226","MetaCyc:PWY-7227" none IPR001564
Pfam 2 133 132 PF00334 "KEGG:00230+2.7.4.6","KEGG:00240+2.7.4.6","MetaCyc:PWY-6545","MetaCyc:PWY-7176","MetaCyc:PWY-7184","MetaCyc:PWY-7187","MetaCyc:PWY-7197","MetaCyc:PWY-7198","MetaCyc:PWY-7205","MetaCyc:PWY-7210","MetaCyc:PWY-7220","MetaCyc:PWY-7221","MetaCyc:PWY-7222","MetaCyc:PWY-7224","MetaCyc:PWY-7226","MetaCyc:PWY-7227" Nucleoside diphosphate kinase IPR001564
PRINTS 4 26 23 PR01243 "KEGG:00230+2.7.4.6","KEGG:00240+2.7.4.6","MetaCyc:PWY-6545","MetaCyc:PWY-7176","MetaCyc:PWY-7184","MetaCyc:PWY-7187","MetaCyc:PWY-7197","MetaCyc:PWY-7198","MetaCyc:PWY-7205","MetaCyc:PWY-7210","MetaCyc:PWY-7220","MetaCyc:PWY-7221","MetaCyc:PWY-7222","MetaCyc:PWY-7224","MetaCyc:PWY-7226","MetaCyc:PWY-7227" Nucleoside diphosphate kinase signature IPR001564
PRINTS 112 131 20 PR01243 "KEGG:00230+2.7.4.6","KEGG:00240+2.7.4.6","MetaCyc:PWY-6545","MetaCyc:PWY-7176","MetaCyc:PWY-7184","MetaCyc:PWY-7187","MetaCyc:PWY-7197","MetaCyc:PWY-7198","MetaCyc:PWY-7205","MetaCyc:PWY-7210","MetaCyc:PWY-7220","MetaCyc:PWY-7221","MetaCyc:PWY-7222","MetaCyc:PWY-7224","MetaCyc:PWY-7226","MetaCyc:PWY-7227" Nucleoside diphosphate kinase signature IPR001564
PRINTS 89 105 17 PR01243 "KEGG:00230+2.7.4.6","KEGG:00240+2.7.4.6","MetaCyc:PWY-6545","MetaCyc:PWY-7176","MetaCyc:PWY-7184","MetaCyc:PWY-7187","MetaCyc:PWY-7197","MetaCyc:PWY-7198","MetaCyc:PWY-7205","MetaCyc:PWY-7210","MetaCyc:PWY-7220","MetaCyc:PWY-7221","MetaCyc:PWY-7222","MetaCyc:PWY-7224","MetaCyc:PWY-7226","MetaCyc:PWY-7227" Nucleoside diphosphate kinase signature IPR001564
PRINTS 68 85 18 PR01243 "KEGG:00230+2.7.4.6","KEGG:00240+2.7.4.6","MetaCyc:PWY-6545","MetaCyc:PWY-7176","MetaCyc:PWY-7184","MetaCyc:PWY-7187","MetaCyc:PWY-7197","MetaCyc:PWY-7198","MetaCyc:PWY-7205","MetaCyc:PWY-7210","MetaCyc:PWY-7220","MetaCyc:PWY-7221","MetaCyc:PWY-7222","MetaCyc:PWY-7224","MetaCyc:PWY-7226","MetaCyc:PWY-7227" Nucleoside diphosphate kinase signature IPR001564
PRINTS 48 67 20 PR01243 "KEGG:00230+2.7.4.6","KEGG:00240+2.7.4.6","MetaCyc:PWY-6545","MetaCyc:PWY-7176","MetaCyc:PWY-7184","MetaCyc:PWY-7187","MetaCyc:PWY-7197","MetaCyc:PWY-7198","MetaCyc:PWY-7205","MetaCyc:PWY-7210","MetaCyc:PWY-7220","MetaCyc:PWY-7221","MetaCyc:PWY-7222","MetaCyc:PWY-7224","MetaCyc:PWY-7226","MetaCyc:PWY-7227" Nucleoside diphosphate kinase signature IPR001564
SUPERFAMILY 1 148 148 SSF54919 "KEGG:00230+2.7.4.6","KEGG:00240+2.7.4.6","MetaCyc:PWY-6545","MetaCyc:PWY-7176","MetaCyc:PWY-7184","MetaCyc:PWY-7187","MetaCyc:PWY-7197","MetaCyc:PWY-7198","MetaCyc:PWY-7205","MetaCyc:PWY-7210","MetaCyc:PWY-7220","MetaCyc:PWY-7221","MetaCyc:PWY-7222","MetaCyc:PWY-7224","MetaCyc:PWY-7226","MetaCyc:PWY-7227" none IPR001564
ProSitePatterns 112 120 9 PS00469 "KEGG:00230+2.7.4.6","KEGG:00240+2.7.4.6","MetaCyc:PWY-6545","MetaCyc:PWY-7176","MetaCyc:PWY-7184","MetaCyc:PWY-7187","MetaCyc:PWY-7197","MetaCyc:PWY-7198","MetaCyc:PWY-7205","MetaCyc:PWY-7210","MetaCyc:PWY-7220","MetaCyc:PWY-7221","MetaCyc:PWY-7222","MetaCyc:PWY-7224","MetaCyc:PWY-7226","MetaCyc:PWY-7227" Nucleoside diphosphate kinases active site. IPR023005

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting