Protein : Qrob_P0705310.2 Q. robur
Protein Identifier  ? Qrob_P0705310.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR12683:SF10 - PREDICTED PROTEIN Gene Prediction Quality  validated
Protein length 

Sequence

Length: 898  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0007049 cell cycle The progression of biochemical and morphological phases and events that occur in a cell during successive cell replication or nuclear replication events. Canonically, the cell cycle comprises the replication and segregation of genetic material followed by the division of the cell, but in endocycles or syncytial cells nuclear replication or nuclear division may not be followed by cell division.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103341304 1 897 + 897 Gaps:29 100.00 908 73.46 0.0 pentatricopeptide repeat-containing protein At4g30825 chloroplastic
blastp_kegg lcl|rcu:RCOM_1406220 1 897 + 897 Gaps:22 96.23 955 71.49 0.0 pentatricopeptide repeat-containing protein putative
blastp_kegg lcl|tcc:TCM_038425 1 897 + 897 Gaps:19 100.00 916 73.47 0.0 Tetratricopeptide repeat (TPR)-like superfamily protein
blastp_kegg lcl|pxb:103949039 1 897 + 897 Gaps:23 99.89 901 72.11 0.0 pentatricopeptide repeat-containing protein At4g30825 chloroplastic
blastp_kegg lcl|mdm:103456354 1 897 + 897 Gaps:25 99.89 901 71.78 0.0 pentatricopeptide repeat-containing protein At4g30825 chloroplastic
blastp_kegg lcl|cit:102620440 1 897 + 897 Gaps:28 99.78 915 71.19 0.0 pentatricopeptide repeat-containing protein At4g30825 chloroplastic-like
blastp_kegg lcl|fve:101295158 1 897 + 897 Gaps:22 100.00 885 71.64 0.0 pentatricopeptide repeat-containing protein At4g30825 chloroplastic-like
blastp_kegg lcl|cmo:103487334 1 895 + 895 Gaps:50 100.00 898 70.94 0.0 pentatricopeptide repeat-containing protein At4g30825 chloroplastic
blastp_kegg lcl|vvi:100267412 1 897 + 897 Gaps:49 100.00 900 71.00 0.0 pentatricopeptide repeat-containing protein At4g30825 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10007430mg 79 897 + 819 none 96.24 851 74.85 0.0 hypothetical protein
blastp_uniprot_sprot sp|O65567|PP342_ARATH 1 897 + 897 Gaps:7 100.00 904 63.16 0.0 Pentatricopeptide repeat-containing protein At4g30825 chloroplastic OS Arabidopsis thaliana GN At4g30825 PE 2 SV 2
blastp_uniprot_sprot sp|Q9M907|PP217_ARATH 137 897 + 761 Gaps:99 91.04 871 33.92 6e-49 Pentatricopeptide repeat-containing protein At3g06920 OS Arabidopsis thaliana GN At3g06920 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SZ52|PP344_ARATH 142 897 + 756 Gaps:492 88.67 1112 59.74 1e-47 Pentatricopeptide repeat-containing protein At4g31850 chloroplastic OS Arabidopsis thaliana GN PGR3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LYZ9|PP362_ARATH 133 897 + 765 Gaps:137 86.69 819 59.86 1e-46 Pentatricopeptide repeat-containing protein At5g02860 OS Arabidopsis thaliana GN At5g02860 PE 2 SV 1
blastp_uniprot_sprot sp|Q940A6|PP325_ARATH 149 897 + 749 Gaps:149 72.79 838 51.31 2e-43 Pentatricopeptide repeat-containing protein At4g19440 chloroplastic OS Arabidopsis thaliana GN At4g19440 PE 2 SV 2
blastp_uniprot_sprot sp|Q8L844|PP413_ARATH 152 885 + 734 Gaps:172 76.45 709 55.54 5e-43 Pentatricopeptide repeat-containing protein At5g42310 mitochondrial OS Arabidopsis thaliana GN At5g42310 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LFC5|PP360_ARATH 154 897 + 744 Gaps:187 86.15 729 46.18 2e-39 Pentatricopeptide repeat-containing protein At5g01110 OS Arabidopsis thaliana GN At5g01110 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CAN0|PPR99_ARATH 67 887 + 821 Gaps:203 98.73 630 60.77 4e-39 Pentatricopeptide repeat-containing protein At1g63130 mitochondrial OS Arabidopsis thaliana GN At1g63130 PE 2 SV 1
blastp_uniprot_sprot sp|Q3EDF8|PPR28_ARATH 145 897 + 753 Gaps:166 79.77 598 70.44 5e-39 Pentatricopeptide repeat-containing protein At1g09900 OS Arabidopsis thaliana GN At1g09900 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LQ16|PPR94_ARATH 150 896 + 747 Gaps:205 91.61 632 67.36 7e-38 Pentatricopeptide repeat-containing protein At1g62910 OS Arabidopsis thaliana GN At1g62910 PE 2 SV 1
rpsblast_cdd gnl|CDD|178757 168 885 + 718 Gaps:134 39.81 1060 48.10 4e-16 PLN03218 PLN03218 maturation of RBCL 1 Provisional.
rpsblast_cdd gnl|CDD|178626 530 875 + 346 Gaps:75 62.31 857 27.72 6e-15 PLN03077 PLN03077 Protein ECB2 Provisional.
rpsblast_cdd gnl|CDD|178630 164 897 + 734 Gaps:96 67.29 697 36.67 3e-13 PLN03081 PLN03081 pentatricopeptide (PPR) repeat-containing protein Provisional.
rpsblast_cdd gnl|CDD|205222 340 878 + 539 none 100.00 50 56.00 1e-10 pfam13041 PPR_2 PPR repeat family. This repeat has no known function. It is about 35 amino acids long and is found in up to 18 copies in some proteins. The family appears to be greatly expanded in plants and fungi. The repeat has been called PPR.

48 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 341 375 35 PS51375 none Pentatricopeptide (PPR) repeat profile. IPR002885
ProSiteProfiles 202 236 35 PS51375 none Pentatricopeptide (PPR) repeat profile. IPR002885
ProSiteProfiles 272 305 34 PS51375 none Pentatricopeptide (PPR) repeat profile. IPR002885
Gene3D 168 449 282 G3DSA:1.25.40.10 none none IPR011990
ProSiteProfiles 376 410 35 PS51375 none Pentatricopeptide (PPR) repeat profile. IPR002885
Pfam 556 582 27 PF01535 none PPR repeat IPR002885
Pfam 310 338 29 PF01535 none PPR repeat IPR002885
Pfam 274 301 28 PF01535 none PPR repeat IPR002885
Pfam 727 757 31 PF01535 none PPR repeat IPR002885
TIGRFAM 659 692 34 TIGR00756 none PPR: pentatricopeptide repeat domain IPR002885
TIGRFAM 727 760 34 TIGR00756 none PPR: pentatricopeptide repeat domain IPR002885
TIGRFAM 833 865 33 TIGR00756 none PPR: pentatricopeptide repeat domain IPR002885
TIGRFAM 343 377 35 TIGR00756 none PPR: pentatricopeptide repeat domain IPR002885
TIGRFAM 205 238 34 TIGR00756 none PPR: pentatricopeptide repeat domain IPR002885
TIGRFAM 588 622 35 TIGR00756 none PPR: pentatricopeptide repeat domain IPR002885
TIGRFAM 797 830 34 TIGR00756 none PPR: pentatricopeptide repeat domain IPR002885
TIGRFAM 311 342 32 TIGR00756 none PPR: pentatricopeptide repeat domain IPR002885
TIGRFAM 763 793 31 TIGR00756 none PPR: pentatricopeptide repeat domain IPR002885
Gene3D 484 581 98 G3DSA:1.25.40.10 none none IPR011990
Gene3D 639 653 15 G3DSA:1.25.40.10 none none IPR011990
Gene3D 794 887 94 G3DSA:1.25.40.10 none none IPR011990
ProSiteProfiles 830 864 35 PS51375 none Pentatricopeptide (PPR) repeat profile. IPR002885
ProSiteProfiles 237 271 35 PS51375 none Pentatricopeptide (PPR) repeat profile. IPR002885
ProSiteProfiles 725 759 35 PS51375 none Pentatricopeptide (PPR) repeat profile. IPR002885
ProSiteProfiles 795 829 35 PS51375 none Pentatricopeptide (PPR) repeat profile. IPR002885
SUPERFAMILY 209 408 200 SSF81901 none none none
ProSiteProfiles 550 584 35 PS51375 none Pentatricopeptide (PPR) repeat profile. IPR002885
SUPERFAMILY 341 574 234 SSF48452 none none none
ProSiteProfiles 306 340 35 PS51375 none Pentatricopeptide (PPR) repeat profile. IPR002885
ProSiteProfiles 585 615 31 PS51375 none Pentatricopeptide (PPR) repeat profile. IPR002885

0 Localization

0 Qtllist

0 Targeting