Protein : Qrob_P0700440.2 Q. robur
Protein Identifier  ? Qrob_P0700440.2 Organism . Name  Quercus robur
Score  95.0 Score Type  egn
Protein Description  (M=2) K00688 - starch phosphorylase [EC:2.4.1.1] Code Enzyme  EC:2.4.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 1001  
Kegg Orthology  K00688
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0008184 glycogen phosphorylase activity Catalysis of the reaction: glycogen + phosphate = maltodextrin + alpha-D-glucose 1-phosphate.
GO:0030170 pyridoxal phosphate binding Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.
GO:0004645 phosphorylase activity Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + phosphate = 1,4-alpha-D-glucosyl(n-1) + alpha-D-glucose 1-phosphate. The name should be qualified in each instance by adding the name of the natural substrate, e.g. maltodextrin phosphorylase, starch phosphorylase, glycogen phosphorylase.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102625638 1 999 + 999 Gaps:21 99.90 1001 81.30 0.0 alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|pmum:103330086 1 999 + 999 Gaps:26 99.90 980 84.58 0.0 alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic
blastp_kegg lcl|cic:CICLE_v10010975mg 1 999 + 999 Gaps:21 99.90 1001 81.10 0.0 hypothetical protein
blastp_kegg lcl|pxb:103951000 1 999 + 999 Gaps:44 99.90 960 83.84 0.0 alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|tcc:TCM_018712 37 999 + 963 Gaps:6 95.14 1008 83.32 0.0 Alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic isoform 1
blastp_kegg lcl|rcu:RCOM_0524530 27 999 + 973 Gaps:23 97.24 977 82.63 0.0 glycogen phosphorylase putative (EC:2.4.1.1)
blastp_kegg lcl|pop:POPTR_0004s12240g 46 999 + 954 Gaps:20 95.75 988 82.98 0.0 POPTRDRAFT_712800 alpha-1 family protein
blastp_kegg lcl|gmx:100800659 2 999 + 998 Gaps:37 99.49 978 83.25 0.0 alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|cam:101506144 49 999 + 951 Gaps:24 94.22 986 84.28 0.0 alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic-like
blastp_kegg lcl|vvi:100245621 27 999 + 973 Gaps:25 97.15 982 83.75 0.0 alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic-like
blastp_pdb 1z8d_A 87 998 + 912 Gaps:32 95.61 842 46.71 9e-114 mol:protein length:842 Glycogen phosphorylase muscle form
blastp_pdb 2ati_B 87 999 + 913 Gaps:30 95.74 846 47.78 9e-113 mol:protein length:846 Glycogen phosphorylase liver form
blastp_pdb 2ati_A 87 999 + 913 Gaps:30 95.74 846 47.78 9e-113 mol:protein length:846 Glycogen phosphorylase liver form
blastp_pdb 1fc0_B 87 999 + 913 Gaps:30 95.74 846 47.78 9e-113 mol:protein length:846 GLYCOGEN PHOSPHORYLASE LIVER FORM
blastp_pdb 1fc0_A 87 999 + 913 Gaps:30 95.74 846 47.78 9e-113 mol:protein length:846 GLYCOGEN PHOSPHORYLASE LIVER FORM
blastp_pdb 1fa9_A 87 999 + 913 Gaps:30 95.74 846 47.78 9e-113 mol:protein length:846 GLYCOGEN PHOSPHORYLASE LIVER FORM
blastp_pdb 2qll_A 87 999 + 913 Gaps:30 95.63 847 47.78 1e-112 mol:protein length:847 Glycogen phosphorylase liver form
blastp_pdb 1l7x_B 87 999 + 913 Gaps:30 95.63 847 47.78 1e-112 mol:protein length:847 Glycogen phosphorylase liver form
blastp_pdb 1l7x_A 87 999 + 913 Gaps:30 95.63 847 47.78 1e-112 mol:protein length:847 Glycogen phosphorylase liver form
blastp_pdb 1l5s_B 87 999 + 913 Gaps:30 95.63 847 47.78 1e-112 mol:protein length:847 Glycogen phosphorylase liver form
blastp_uniprot_sprot sp|P53536|PHSL_VICFA 10 999 + 990 Gaps:16 98.90 1003 79.13 0.0 Alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic OS Vicia faba GN PHO1 PE 1 SV 2
blastp_uniprot_sprot sp|P27598|PHSL_IPOBA 51 997 + 947 Gaps:31 95.92 955 83.19 0.0 Alpha-1 4 glucan phosphorylase L isozyme chloroplastic/amyloplastic OS Ipomoea batatas PE 2 SV 1
blastp_uniprot_sprot sp|P04045|PHSL1_SOLTU 31 999 + 969 Gaps:29 97.52 966 80.79 0.0 Alpha-1 4 glucan phosphorylase L-1 isozyme chloroplastic/amyloplastic OS Solanum tuberosum PE 1 SV 2
blastp_uniprot_sprot sp|Q9LIB2|PHS1_ARATH 35 999 + 965 Gaps:47 96.26 962 79.81 0.0 Alpha-glucan phosphorylase 1 OS Arabidopsis thaliana GN PHS1 PE 1 SV 1
blastp_uniprot_sprot sp|P53535|PHSL2_SOLTU 61 999 + 939 Gaps:29 94.46 974 77.07 0.0 Alpha-1 4 glucan phosphorylase L-2 isozyme chloroplastic/amyloplastic OS Solanum tuberosum GN STP-1 PE 1 SV 1
blastp_uniprot_sprot sp|P53537|PHSH_VICFA 91 999 + 909 Gaps:6 95.37 842 66.13 0.0 Alpha-glucan phosphorylase H isozyme OS Vicia faba PE 1 SV 1
blastp_uniprot_sprot sp|Q9SD76|PHS2_ARATH 87 995 + 909 Gaps:20 96.43 841 65.10 0.0 Alpha-glucan phosphorylase 2 cytosolic OS Arabidopsis thaliana GN PHS2 PE 2 SV 1
blastp_uniprot_sprot sp|P32811|PHSH_SOLTU 62 999 + 938 Gaps:19 99.40 838 64.47 0.0 Alpha-glucan phosphorylase H isozyme OS Solanum tuberosum PE 1 SV 1
blastp_uniprot_sprot sp|Q9LKJ3|PHSH_WHEAT 80 994 + 915 Gaps:13 98.20 832 64.38 0.0 Alpha-glucan phosphorylase H isozyme OS Triticum aestivum PE 2 SV 1
blastp_uniprot_sprot sp|Q00766|PHS1_DICDI 87 999 + 913 Gaps:15 92.38 853 51.27 2e-129 Glycogen phosphorylase 1 OS Dictyostelium discoideum GN glpV PE 1 SV 3

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 30 502 473 PTHR11468 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474";signature_desc=GLYCOGEN PHOSPHORYLASE none IPR000811
PANTHER 30 502 473 PTHR11468:SF8 none none none
ProSitePatterns 838 850 13 PS00102 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474" Phosphorylase pyridoxal-phosphate attachment site. IPR000811
TIGRFAM 581 994 414 TIGR02093 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474" P_ylase: glycogen/starch/alpha-glucan phosphorylases IPR011833
PANTHER 598 999 402 PTHR11468:SF8 none none none
Gene3D 595 658 64 G3DSA:3.40.50.2000 none none none
Gene3D 81 499 419 G3DSA:3.40.50.2000 none none none
SUPERFAMILY 595 998 404 SSF53756 none none none
PANTHER 598 999 402 PTHR11468 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474";signature_desc=GLYCOGEN PHOSPHORYLASE none IPR000811
SUPERFAMILY 75 486 412 SSF53756 none none none
Pfam 596 996 401 PF00343 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474" Carbohydrate phosphorylase IPR000811
Pfam 175 499 325 PF00343 "KEGG:00500+2.4.1.1","MetaCyc:PWY-5941","MetaCyc:PWY-6731","MetaCyc:PWY-6737","MetaCyc:PWY-7238","Reactome:REACT_474" Carbohydrate phosphorylase IPR000811
Gene3D 659 979 321 G3DSA:3.40.50.2000 none none none

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting