Protein : Qrob_P0697610.2 Q. robur
Protein Identifier  ? Qrob_P0697610.2 Organism . Name  Quercus robur
Score  63.4 Score Type  egn
Protein Description  (M=1) K01807 - ribose 5-phosphate isomerase A [EC:5.3.1.6] Code Enzyme  EC:5.3.1.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 285  
Kegg Orthology  K01807
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0004751 ribose-5-phosphate isomerase activity Catalysis of the reaction: D-ribose 5-phosphate = D-ribulose 5-phosphate.
GO:0009052 pentose-phosphate shunt, non-oxidative branch The branch of the pentose-phosphate shunt which does not involve oxidation reactions. It comprises a series of sugar phosphate interconversions, starting with ribulose 5-P and producing fructose 6-P and glyceraldehyde 3-P.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103489339 1 283 + 283 Gaps:10 100.00 275 75.27 1e-136 probable ribose-5-phosphate isomerase 2
blastp_kegg lcl|csv:101211316 1 283 + 283 Gaps:10 100.00 275 74.91 1e-135 probable ribose-5-phosphate isomerase-like
blastp_kegg lcl|vvi:100247460 1 283 + 283 Gaps:14 100.00 269 75.09 9e-134 probable ribose-5-phosphate isomerase-like
blastp_kegg lcl|cit:102627714 26 283 + 258 Gaps:8 96.15 260 77.60 2e-130 probable ribose-5-phosphate isomerase-like
blastp_kegg lcl|tcc:TCM_010816 22 283 + 262 Gaps:4 99.23 260 74.81 1e-129 Ribose-5-phosphate isomerase 2
blastp_kegg lcl|vvi:100257096 1 283 + 283 Gaps:14 77.97 345 73.98 7e-129 probable ribose-5-phosphate isomerase-like
blastp_kegg lcl|pvu:PHAVU_007G036500g 1 283 + 283 Gaps:18 100.00 265 72.08 1e-128 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_002G234600g 1 283 + 283 Gaps:19 100.00 264 71.97 4e-128 hypothetical protein
blastp_kegg lcl|gmx:100795150 1 283 + 283 Gaps:18 100.00 265 71.70 1e-127 probable ribose-5-phosphate isomerase-like
blastp_kegg lcl|pmum:103341565 16 283 + 268 Gaps:9 100.00 259 74.90 2e-127 probable ribose-5-phosphate isomerase 2
blastp_pdb 2f8m_B 50 273 + 224 Gaps:6 90.98 244 47.30 8e-60 mol:protein length:244 ribose 5-phosphate isomerase
blastp_pdb 2f8m_A 50 273 + 224 Gaps:6 90.98 244 47.30 8e-60 mol:protein length:244 ribose 5-phosphate isomerase
blastp_pdb 1uj6_A 54 278 + 225 Gaps:11 94.27 227 50.00 1e-52 mol:protein length:227 ribose 5-phosphate isomerase
blastp_pdb 1uj5_A 54 278 + 225 Gaps:11 94.27 227 50.00 1e-52 mol:protein length:227 ribose 5-phosphate isomerase
blastp_pdb 1uj4_A 54 278 + 225 Gaps:11 94.27 227 50.00 1e-52 mol:protein length:227 ribose 5-phosphate isomerase
blastp_pdb 3l7o_B 51 280 + 230 Gaps:23 97.33 225 47.49 4e-49 mol:protein length:225 Ribose-5-phosphate isomerase A
blastp_pdb 3l7o_A 51 280 + 230 Gaps:23 97.33 225 47.49 4e-49 mol:protein length:225 Ribose-5-phosphate isomerase A
blastp_pdb 1lk7_D 48 279 + 232 Gaps:7 98.25 229 40.44 2e-47 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk7_C 48 279 + 232 Gaps:7 98.25 229 40.44 2e-47 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_pdb 1lk7_B 48 279 + 232 Gaps:7 98.25 229 40.44 2e-47 mol:protein length:229 D-Ribose-5-Phosphate Isomerase
blastp_uniprot_sprot sp|Q9ZU38|RPIA_ARATH 1 283 + 283 Gaps:21 99.62 265 70.45 5e-121 Probable ribose-5-phosphate isomerase OS Arabidopsis thaliana GN At2g01290 PE 2 SV 1
blastp_uniprot_sprot sp|B8FL28|RPIA_DESAA 49 279 + 231 Gaps:14 96.96 230 53.36 6e-60 Ribose-5-phosphate isomerase A OS Desulfatibacillum alkenivorans (strain AK-01) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|A7NNA4|RPIA_ROSCS 54 278 + 225 Gaps:10 92.74 234 47.47 8e-54 Ribose-5-phosphate isomerase A OS Roseiflexus castenholzii (strain DSM 13941 / HLO8) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q139E9|RPIA_RHOPS 48 284 + 237 Gaps:5 100.00 232 42.67 6e-53 Ribose-5-phosphate isomerase A OS Rhodopseudomonas palustris (strain BisB5) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q72J47|RPIA_THET2 54 278 + 225 Gaps:11 94.27 227 50.00 1e-52 Ribose-5-phosphate isomerase A OS Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN rpiA PE 1 SV 1
blastp_uniprot_sprot sp|A7HS32|RPIA_PARL1 48 280 + 233 Gaps:7 98.70 231 43.86 2e-52 Ribose-5-phosphate isomerase A OS Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|A5UXC5|RPIA_ROSS1 54 278 + 225 Gaps:8 93.13 233 48.39 3e-52 Ribose-5-phosphate isomerase A OS Roseiflexus sp. (strain RS-1) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q5SIR5|RPIA_THET8 54 278 + 225 Gaps:11 94.27 227 50.00 4e-52 Ribose-5-phosphate isomerase A OS Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q89NS9|RPIA_BRADU 48 283 + 236 Gaps:11 97.51 241 42.13 8e-52 Ribose-5-phosphate isomerase A OS Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) GN rpiA PE 3 SV 1
blastp_uniprot_sprot sp|Q2K7M6|RPIA_RHIEC 52 279 + 228 Gaps:6 95.69 232 44.59 1e-51 Ribose-5-phosphate isomerase A OS Rhizobium etli (strain CFN 42 / ATCC 51251) GN rpiA PE 3 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 182 264 83 SSF75445 none none none
PANTHER 18 283 266 PTHR11934 "KEGG:00030+5.3.1.6","KEGG:00051+5.3.1.6","KEGG:00710+5.3.1.6","MetaCyc:PWY-1861","MetaCyc:PWY-5723","UniPathway:UPA00115";signature_desc=RIBOSE-5-PHOSPHATE ISOMERASE none IPR004788
SUPERFAMILY 49 198 150 SSF100950 none none none
Pfam 98 278 181 PF06026 "KEGG:00030+5.3.1.6","KEGG:00051+5.3.1.6","KEGG:00710+5.3.1.6","MetaCyc:PWY-1861","MetaCyc:PWY-5723","UniPathway:UPA00115" Ribose 5-phosphate isomerase A (phosphoriboisomerase A) IPR004788
PANTHER 18 283 266 PTHR11934:SF7 none none none
Hamap 50 281 232 MF_00170 "KEGG:00030+5.3.1.6","KEGG:00051+5.3.1.6","KEGG:00710+5.3.1.6","MetaCyc:PWY-1861","MetaCyc:PWY-5723","UniPathway:UPA00115" Ribose-5-phosphate isomerase A [rpiA]. IPR020672
Gene3D 51 193 143 G3DSA:3.40.50.1360 none none none
Gene3D 194 261 68 G3DSA:3.30.70.260 none none none
TIGRFAM 53 278 226 TIGR00021 "KEGG:00030+5.3.1.6","KEGG:00051+5.3.1.6","KEGG:00710+5.3.1.6","MetaCyc:PWY-1861","MetaCyc:PWY-5723","UniPathway:UPA00115" rpiA: ribose 5-phosphate isomerase A IPR004788

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2002_QTL7_peak_Bud_burst_A4 Qrob_Chr01 1 s_1DFK66_275 s_1AMVCC_444 3,3 0 7,3 lod 9,4 14,8

0 Targeting