4 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0006508 | proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
GO:0008236 | serine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). |
GO:0004252 | serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). |
GO:0070008 | serine-type exopeptidase activity | Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). |
37 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|pmum:103321112 | 55 | 767 | + | 713 | Gaps:5 | 92.29 | 778 | 81.75 | 0.0 | prolyl endopeptidase-like |
blastp_kegg | lcl|pper:PRUPE_ppa001738mg | 27 | 767 | + | 741 | Gaps:10 | 97.28 | 772 | 79.36 | 0.0 | hypothetical protein |
blastp_kegg | lcl|tcc:TCM_007652 | 51 | 767 | + | 717 | Gaps:6 | 100.00 | 717 | 81.31 | 0.0 | Prolyl oligopeptidase family protein isoform 1 |
blastp_kegg | lcl|mdm:103403381 | 62 | 767 | + | 706 | Gaps:9 | 91.78 | 779 | 81.82 | 0.0 | prolyl endopeptidase-like |
blastp_kegg | lcl|cmo:103488786 | 18 | 764 | + | 747 | Gaps:11 | 98.28 | 757 | 79.44 | 0.0 | prolyl endopeptidase-like |
blastp_kegg | lcl|pxb:103943243 | 62 | 763 | + | 702 | Gaps:10 | 91.05 | 782 | 81.74 | 0.0 | prolyl endopeptidase-like |
blastp_kegg | lcl|pmum:103321115 | 55 | 767 | + | 713 | Gaps:5 | 92.29 | 778 | 80.22 | 0.0 | prolyl endopeptidase-like |
blastp_kegg | lcl|csv:101224121 | 63 | 764 | + | 702 | Gaps:4 | 93.26 | 757 | 81.16 | 0.0 | protease 2-like |
blastp_kegg | lcl|csv:101213609 | 63 | 764 | + | 702 | Gaps:4 | 93.26 | 757 | 81.16 | 0.0 | protease 2-like |
blastp_kegg | lcl|cam:101496531 | 65 | 758 | + | 694 | Gaps:3 | 91.59 | 761 | 80.92 | 0.0 | protease 2-like |
blastp_pdb | 2xe4_A | 43 | 756 | + | 714 | Gaps:39 | 97.07 | 751 | 40.19 | 3e-171 | mol:protein length:751 OLIGOPEPTIDASE B |
blastp_pdb | 3ivm_A | 64 | 757 | + | 694 | Gaps:75 | 97.11 | 693 | 28.23 | 1e-62 | mol:protein length:693 prolyl endopeptidase |
blastp_pdb | 3ium_A | 64 | 757 | + | 694 | Gaps:75 | 97.11 | 693 | 28.23 | 1e-62 | mol:protein length:693 Prolyl Endopeptidase |
blastp_pdb | 3iul_A | 64 | 757 | + | 694 | Gaps:75 | 97.11 | 693 | 28.23 | 1e-62 | mol:protein length:693 Prolyl endopeptidase |
blastp_pdb | 3iuj_A | 64 | 757 | + | 694 | Gaps:75 | 97.11 | 693 | 28.23 | 1e-62 | mol:protein length:693 Prolyl endopeptidase |
blastp_pdb | 2bkl_B | 75 | 764 | + | 690 | Gaps:61 | 96.26 | 695 | 29.30 | 4e-62 | mol:protein length:695 PROLYL ENDOPEPTIDASE |
blastp_pdb | 2bkl_A | 75 | 764 | + | 690 | Gaps:61 | 96.26 | 695 | 29.30 | 4e-62 | mol:protein length:695 PROLYL ENDOPEPTIDASE |
blastp_pdb | 3iur_A | 64 | 757 | + | 694 | Gaps:75 | 97.11 | 693 | 28.08 | 5e-62 | mol:protein length:693 Prolyl Endopeptidase |
blastp_pdb | 3iuq_A | 64 | 757 | + | 694 | Gaps:75 | 97.11 | 693 | 28.08 | 5e-62 | mol:protein length:693 Prolyl Endopeptidase |
blastp_pdb | 3iun_A | 64 | 757 | + | 694 | Gaps:75 | 97.11 | 693 | 28.08 | 5e-62 | mol:protein length:693 Prolyl Endopeptidase |
blastp_uniprot_sprot | sp|Q59536|PTRB_MORLA | 64 | 758 | + | 695 | Gaps:30 | 98.12 | 690 | 40.92 | 4e-177 | Protease 2 OS Moraxella lacunata GN ptrB PE 3 SV 1 |
blastp_uniprot_sprot | sp|P24555|PTRB_ECOLI | 64 | 753 | + | 690 | Gaps:33 | 97.81 | 686 | 42.47 | 3e-165 | Protease 2 OS Escherichia coli (strain K12) GN ptrB PE 1 SV 2 |
blastp_uniprot_sprot | sp|P55656|Y4SO_RHISN | 62 | 757 | + | 696 | Gaps:47 | 98.58 | 705 | 31.80 | 5e-95 | Uncharacterized peptidase y4sO OS Rhizobium sp. (strain NGR234) GN NGR_a01580 PE 3 SV 1 |
blastp_uniprot_sprot | sp|P55627|Y4QF_RHISN | 62 | 757 | + | 696 | Gaps:57 | 92.18 | 754 | 31.37 | 6e-88 | Uncharacterized peptidase y4qF OS Rhizobium sp. (strain NGR234) GN NGR_a01920 PE 3 SV 1 |
blastp_uniprot_sprot | sp|P27028|PPCE_ELIME | 64 | 758 | + | 695 | Gaps:66 | 95.46 | 705 | 30.76 | 4e-72 | Prolyl endopeptidase OS Elizabethkingia meningoseptica GN f1pep1 PE 1 SV 1 |
blastp_uniprot_sprot | sp|P27195|PPCF_ELIMR | 64 | 758 | + | 695 | Gaps:82 | 95.46 | 705 | 30.01 | 1e-65 | Prolyl endopeptidase OS Elizabethkingia miricola PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q06903|PPCE_AERHY | 64 | 753 | + | 690 | Gaps:79 | 96.96 | 690 | 28.55 | 5e-63 | Prolyl endopeptidase OS Aeromonas hydrophila PE 1 SV 2 |
blastp_uniprot_sprot | sp|Q32N48|PPCEL_XENLA | 199 | 718 | + | 520 | Gaps:20 | 72.14 | 707 | 29.61 | 1e-58 | Prolyl endopeptidase-like OS Xenopus laevis GN prepl PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q5ZKL5|PPCEL_CHICK | 201 | 718 | + | 518 | Gaps:23 | 69.26 | 732 | 28.40 | 8e-56 | Prolyl endopeptidase-like OS Gallus gallus GN PREPL PE 2 SV 1 |
blastp_uniprot_sprot | sp|Q8C167|PPCEL_MOUSE | 135 | 714 | + | 580 | Gaps:44 | 76.14 | 725 | 29.71 | 4e-54 | Prolyl endopeptidase-like OS Mus musculus GN Prepl PE 2 SV 1 |
19 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
Pfam | 541 | 757 | 217 | PF00326 | none | Prolyl oligopeptidase family | IPR001375 |
Phobius | 1 | 23 | 23 | SIGNAL_PEPTIDE_N_REGION | none | N-terminal region of a signal peptide. | none |
PANTHER | 10 | 767 | 758 | PTHR11757 | none | none | IPR002470 |
Gene3D | 442 | 756 | 315 | G3DSA:3.40.50.1820 | none | none | IPR029058 |
Phobius | 48 | 767 | 720 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
SUPERFAMILY | 59 | 489 | 431 | SSF50993 | none | none | none |
Phobius | 1 | 47 | 47 | SIGNAL_PEPTIDE | none | Signal peptide region | none |
Phobius | 36 | 47 | 12 | SIGNAL_PEPTIDE_C_REGION | none | C-terminal region of a signal peptide. | none |
PRINTS | 668 | 683 | 16 | PR00862 | none | Prolyl oligopeptidase serine protease (S9A) signature | IPR002470 |
PRINTS | 580 | 599 | 20 | PR00862 | none | Prolyl oligopeptidase serine protease (S9A) signature | IPR002470 |
PRINTS | 686 | 708 | 23 | PR00862 | none | Prolyl oligopeptidase serine protease (S9A) signature | IPR002470 |
PRINTS | 526 | 544 | 19 | PR00862 | none | Prolyl oligopeptidase serine protease (S9A) signature | IPR002470 |
PRINTS | 610 | 630 | 21 | PR00862 | none | Prolyl oligopeptidase serine protease (S9A) signature | IPR002470 |
PRINTS | 552 | 576 | 25 | PR00862 | none | Prolyl oligopeptidase serine protease (S9A) signature | IPR002470 |
PANTHER | 10 | 767 | 758 | PTHR11757:SF3 | none | none | none |
Gene3D | 199 | 384 | 186 | G3DSA:2.120.10.30 | none | none | IPR011042 |
Pfam | 63 | 480 | 418 | PF02897 | none | Prolyl oligopeptidase, N-terminal beta-propeller domain | IPR023302 |
Phobius | 24 | 35 | 12 | SIGNAL_PEPTIDE_H_REGION | none | Hydrophobic region of a signal peptide. | none |
SUPERFAMILY | 496 | 737 | 242 | SSF53474 | none | none | IPR029058 |
2 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran2_2014_nSecLBD_3P | Qrob_Chr08 | 8 | s_1BN2OD_551 | s_1B5AYF_599 | 17,17 | 0 | 43,51 | lod | 1,9229 | 4,4 |
Bourran2_2014_rEpiBC_3P | Qrob_Chr05 | 5 | s_2GDU0O_517 | s_1BT8O3_239 | 25,81 | 0 | 55,45 | lod | 2,2101 | 5,5 |