Protein : Qrob_P0687010.2 Q. robur
Protein Identifier  ? Qrob_P0687010.2 Organism . Name  Quercus robur
Score  95.1 Score Type  egn
Protein Description  (M=3) PTHR12741:SF8 - gb def: CG7967-PA (GH19706p) (RH70193p) Code Enzyme  EC:2.4.1.34
Gene Prediction Quality  validated Protein length 

Sequence

Length: 406  
Kegg Orthology  K11000
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0003843 1,3-beta-D-glucan synthase activity Catalysis of the reaction: UDP-glucose + [(1->3)-beta-D-glucosyl](n) = UDP + [(1->3)-beta-D-glucosyl](n+1).
GO:0000148 1,3-beta-D-glucan synthase complex A protein complex that catalyzes the transfer of a glucose group from UDP-glucose to a (1->3)-beta-D-glucan chain.
GO:0006075 (1->3)-beta-D-glucan biosynthetic process The chemical reactions and pathways resulting in the formation of (1->3)-beta-D-glucans, compounds composed of glucose residues linked by (1->3)-beta-D-glucosidic bonds.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10014066mg 6 405 + 400 Gaps:4 32.66 1237 85.40 0.0 hypothetical protein
blastp_kegg lcl|cit:102612131 6 405 + 400 Gaps:4 21.22 1904 85.40 0.0 callose synthase 9-like
blastp_kegg lcl|cmo:103492488 6 405 + 400 Gaps:4 21.23 1903 83.42 0.0 callose synthase 9
blastp_kegg lcl|csv:101216435 6 405 + 400 Gaps:4 21.21 1905 83.17 0.0 callose synthase 9-like
blastp_kegg lcl|vvi:100232893 6 403 + 398 Gaps:5 20.17 1988 84.29 0.0 CS callose synthase-like
blastp_kegg lcl|tcc:TCM_040336 6 405 + 400 Gaps:4 21.21 1905 85.64 0.0 Glucan synthase-like 10 isoform 1
blastp_kegg lcl|cam:101492868 6 403 + 398 Gaps:4 21.15 1901 86.57 0.0 callose synthase 9-like
blastp_kegg lcl|pop:POPTR_0001s04940g 6 402 + 397 Gaps:4 26.12 1535 83.29 0.0 hypothetical protein
blastp_kegg lcl|mtr:MTR_1g116470 6 403 + 398 Gaps:4 35.70 1126 86.57 0.0 Callose synthase
blastp_kegg lcl|gmx:100787540 6 403 + 398 Gaps:4 21.09 1906 87.06 0.0 callose synthase 9-like
blastp_uniprot_sprot sp|Q9SFU6|CALS9_ARATH 6 405 + 400 Gaps:4 21.38 1890 80.45 0.0 Callose synthase 9 OS Arabidopsis thaliana GN CALS9 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SJM0|CALSA_ARATH 6 404 + 399 Gaps:4 21.17 1904 67.00 0.0 Callose synthase 10 OS Arabidopsis thaliana GN CALS10 PE 2 SV 5
blastp_uniprot_sprot sp|Q9AUE0|CALS1_ARATH 7 402 + 396 Gaps:8 20.72 1950 53.47 2e-137 Callose synthase 1 OS Arabidopsis thaliana GN CALS1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SL03|CALS2_ARATH 7 402 + 396 Gaps:8 20.72 1950 53.22 7e-137 Callose synthase 2 OS Arabidopsis thaliana GN CALS2 PE 2 SV 3
blastp_uniprot_sprot sp|Q9SHJ3|CALS7_ARATH 7 400 + 394 Gaps:7 20.48 1958 51.12 6e-129 Callose synthase 7 OS Arabidopsis thaliana GN CALS7 PE 3 SV 3
blastp_uniprot_sprot sp|Q9LXT9|CALS3_ARATH 7 402 + 396 Gaps:7 20.61 1955 52.61 2e-127 Callose synthase 3 OS Arabidopsis thaliana GN CALS3 PE 2 SV 3
blastp_uniprot_sprot sp|Q9LYS6|CALS6_ARATH 7 400 + 394 Gaps:7 20.87 1921 49.88 8e-124 Putative callose synthase 6 OS Arabidopsis thaliana GN CALS6 PE 3 SV 2
blastp_uniprot_sprot sp|Q9S9U0|CALSB_ARATH 6 400 + 395 Gaps:9 22.62 1768 49.75 6e-119 Callose synthase 11 OS Arabidopsis thaliana GN CALS11 PE 2 SV 1
blastp_uniprot_sprot sp|Q3B724|CALS5_ARATH 6 398 + 393 Gaps:12 21.06 1923 49.63 8e-119 Callose synthase 5 OS Arabidopsis thaliana GN CALS5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ZT82|CALSC_ARATH 6 405 + 400 Gaps:11 22.87 1780 48.89 4e-116 Callose synthase 12 OS Arabidopsis thaliana GN CALS12 PE 1 SV 1
rpsblast_cdd gnl|CDD|202219 21 270 + 250 Gaps:33 33.13 818 24.35 3e-47 pfam02364 Glucan_synthase 1 3-beta-glucan synthase component. This family consists of various 1 3-beta-glucan synthase components including Gls1 Gls2 and Gls3 from yeast. 1 3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1 3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1 3)-beta-D-glucosyl}(N) < > UDP + {(1 3)-beta-D-glucosyl}(N+1).
rpsblast_kog gnl|CDD|36134 6 402 + 397 Gaps:8 24.12 1679 54.32 1e-145 KOG0916 KOG0916 KOG0916 1 3-beta-glucan synthase/callose synthase catalytic subunit [Cell wall/membrane/envelope biogenesis].

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 219 236 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 59 79 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 269 279 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 6 404 399 PTHR12741 none none none
Phobius 373 405 33 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 280 304 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 237 247 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 332 350 19 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 1 33 33 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 351 372 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 26 209 184 PF02364 "KEGG:00500+2.4.1.34","MetaCyc:PWY-6773" 1,3-beta-glucan synthase component IPR003440
Phobius 310 331 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 142 166 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 80 141 62 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 305 309 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 248 268 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 6 404 399 PTHR12741:SF8 none none none
Phobius 53 58 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 167 218 52 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 34 52 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

8 Localization

Analysis Start End Length
TMHMM 33 52 19
TMHMM 214 236 22
TMHMM 59 81 22
TMHMM 143 165 22
TMHMM 351 373 22
TMHMM 246 268 22
TMHMM 308 330 22
TMHMM 281 303 22

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting