Protein : Qrob_P0679310.2 Q. robur

Protein Identifier  ? Qrob_P0679310.2 Organism . Name  Quercus robur
Score  5.3 Score Type  egn
Protein Description  (M=36) 2.4.1.207 - Xyloglucan:xyloglucosyl transferase. Code Enzyme  EC:2.4.1.207
Gene Prediction Quality  validated Protein length 

Sequence

Length: 293  
Kegg Orthology  K08235

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0 Synonyms

8 GO Terms

Identifier Name Description
GO:0005618 cell wall The rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal, most prokaryotic cells and some protozoan parasites, maintaining their shape and protecting them from osmotic lysis. In plants it is made of cellulose and, often, lignin; in fungi it is composed largely of polysaccharides; in bacteria it is composed of peptidoglycan; in protozoan parasites such as Giardia species, it's made of carbohydrates and proteins.
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
GO:0010411 xyloglucan metabolic process The chemical reactions and pathways involving xyloglucan, the cross-linking glycan composed of (1->4)-beta-D-glucan backbone substituted at regular intervals with beta-D-xylosyl-(1->6) residues, which is present in the primary cell wall of most higher plants.
GO:0006073 cellular glucan metabolic process The chemical reactions and pathways involving glucans, polysaccharides consisting only of glucose residues.
GO:0016762 xyloglucan:xyloglucosyl transferase activity Catalysis of the cleavage of a beta-(1->4) bond in the backbone of a xyloglucan and transfers the xyloglucanyl segment on to O-4 of the non-reducing terminal glucose residue of an acceptor, which can be a xyloglucan or an oligosaccharide of xyloglucan.
GO:0048046 apoplast The cell membranes and intracellular regions in a plant are connected through plasmodesmata, and plants may be described as having two major compartments: the living symplast and the non-living apoplast. The apoplast is external to the plasma membrane and includes cell walls, intercellular spaces and the lumen of dead structures such as xylem vessels. Water and solutes pass freely through it.
GO:0042546 cell wall biogenesis A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a cell wall. Includes biosynthesis of constituent macromolecules, such as proteins and polysaccharides, and those macromolecular modifications that are involved in synthesis or assembly of the cellular component. A cell wall is the rigid or semi-rigid envelope lying outside the cell membrane of plant, fungal and most prokaryotic cells, maintaining their shape and protecting them from osmotic lysis.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1194420 13 291 + 279 none 97.21 287 78.14 1e-166 Brassinosteroid-regulated protein BRU1 precursor putative (EC:2.4.1.207)
blastp_kegg lcl|rcu:RCOM_1194430 13 291 + 279 none 97.21 287 78.14 1e-165 Brassinosteroid-regulated protein BRU1 precursor putative (EC:2.4.1.207)
blastp_kegg lcl|pop:POPTR_0002s06130g 10 291 + 282 none 95.92 294 75.89 6e-163 POPTRDRAFT_411405 xyloglucan endo-1 family protein
blastp_kegg lcl|pop:POPTR_0005s22300g 13 291 + 279 Gaps:3 95.92 294 77.30 1e-162 POPTRDRAFT_205198 xyloglucan endo-1 family protein
blastp_kegg lcl|pop:POPTR_1065s00210g 23 291 + 269 none 99.26 271 78.44 3e-159 xyloglucan endo-1 family protein
blastp_kegg lcl|mdm:103443198 1 291 + 291 Gaps:4 100.00 295 72.88 1e-157 brassinosteroid-regulated protein BRU1-like
blastp_kegg lcl|pxb:103947456 4 291 + 288 Gaps:6 99.66 295 73.47 2e-157 brassinosteroid-regulated protein BRU1-like
blastp_kegg lcl|pxb:103947454 4 291 + 288 Gaps:6 99.66 295 73.13 3e-157 brassinosteroid-regulated protein BRU1-like
blastp_kegg lcl|tcc:TCM_001860 8 291 + 284 Gaps:5 96.26 294 75.27 5e-157 Xyloglucan endotransglucosylase/hydrolase 15
blastp_kegg lcl|pxb:103947458 3 291 + 289 Gaps:1 98.98 293 72.76 2e-156 brassinosteroid-regulated protein BRU1-like
blastp_pdb 1un1_B 17 290 + 274 Gaps:10 97.84 278 58.46 7e-110 mol:protein length:278 XYLOGLUCAN ENDOTRANSGLYCOSYLASE
blastp_pdb 1un1_A 17 290 + 274 Gaps:10 97.84 278 58.46 7e-110 mol:protein length:278 XYLOGLUCAN ENDOTRANSGLYCOSYLASE
blastp_pdb 1umz_B 17 290 + 274 Gaps:10 97.84 278 58.46 7e-110 mol:protein length:278 XYLOGLUCAN ENDOTRANSGLYCOSYLASE
blastp_pdb 1umz_A 17 290 + 274 Gaps:10 97.84 278 58.46 7e-110 mol:protein length:278 XYLOGLUCAN ENDOTRANSGLYCOSYLASE
blastp_pdb 2uwb_B 29 286 + 258 Gaps:16 92.88 267 42.34 8e-59 mol:protein length:267 CELLULASE
blastp_pdb 2uwb_A 29 286 + 258 Gaps:16 92.88 267 42.34 8e-59 mol:protein length:267 CELLULASE
blastp_pdb 2vh9_B 5 286 + 282 Gaps:28 97.93 290 39.44 1e-58 mol:protein length:290 CELLULASE
blastp_pdb 2vh9_A 5 286 + 282 Gaps:28 97.93 290 39.44 1e-58 mol:protein length:290 CELLULASE
blastp_pdb 2uwc_B 29 286 + 258 Gaps:21 93.36 271 41.90 1e-56 mol:protein length:271 CELLULASE
blastp_pdb 2uwc_A 29 286 + 258 Gaps:21 93.36 271 41.90 1e-56 mol:protein length:271 CELLULASE
blastp_uniprot_sprot sp|P35694|BRU1_SOYBN 10 288 + 279 Gaps:8 95.76 283 72.69 1e-143 Brassinosteroid-regulated protein BRU1 OS Glycine max PE 2 SV 1
blastp_uniprot_sprot sp|Q8LG58|XTH16_ARATH 7 291 + 285 Gaps:4 97.94 291 65.96 9e-142 Probable xyloglucan endotransglucosylase/hydrolase protein 16 OS Arabidopsis thaliana GN XTH16 PE 2 SV 2
blastp_uniprot_sprot sp|Q38911|XTH15_ARATH 3 291 + 289 Gaps:9 98.96 289 67.48 2e-141 Probable xyloglucan endotransglucosylase/hydrolase protein 15 OS Arabidopsis thaliana GN XTH15 PE 1 SV 1
blastp_uniprot_sprot sp|Q38910|XTH23_ARATH 1 286 + 286 Gaps:6 97.90 286 64.64 2e-131 Probable xyloglucan endotransglucosylase/hydrolase protein 23 OS Arabidopsis thaliana GN XTH23 PE 2 SV 1
blastp_uniprot_sprot sp|Q38857|XTH22_ARATH 13 286 + 274 Gaps:1 96.83 284 63.64 9e-131 Xyloglucan endotransglucosylase/hydrolase protein 22 OS Arabidopsis thaliana GN XTH22 PE 1 SV 1
blastp_uniprot_sprot sp|Q38907|XTH25_ARATH 3 288 + 286 Gaps:5 98.94 284 61.92 3e-129 Probable xyloglucan endotransglucosylase/hydrolase protein 25 OS Arabidopsis thaliana GN XTH25 PE 2 SV 2
blastp_uniprot_sprot sp|P24806|XTH24_ARATH 18 289 + 272 Gaps:16 95.17 269 66.02 3e-122 Xyloglucan endotransglucosylase/hydrolase protein 24 OS Arabidopsis thaliana GN XTH24 PE 1 SV 2
blastp_uniprot_sprot sp|Q9FI31|XTH20_ARATH 26 286 + 261 Gaps:7 90.78 282 62.50 2e-120 Xyloglucan endotransglucosylase/hydrolase protein 20 OS Arabidopsis thaliana GN XTH20 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZV40|XTH21_ARATH 1 286 + 286 Gaps:12 97.05 305 59.12 8e-120 Probable xyloglucan endotransglucosylase/hydrolase protein 21 OS Arabidopsis thaliana GN XTH21 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FKL8|XTH13_ARATH 26 286 + 261 Gaps:4 91.20 284 64.09 3e-118 Putative xyloglucan endotransglucosylase/hydrolase protein 13 OS Arabidopsis thaliana GN XTH13 PE 3 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 11 22 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
ProSitePatterns 103 113 11 PS01034 none Glycosyl hydrolases family 16 active sites. IPR008263
Pfam 30 210 181 PF00722 none Glycosyl hydrolases family 16 IPR000757
PRINTS 119 132 14 PR00737 none Glycosyl hydrolase family 16 signature IPR008264
PRINTS 61 79 19 PR00737 none Glycosyl hydrolase family 16 signature IPR008264
PRINTS 137 154 18 PR00737 none Glycosyl hydrolase family 16 signature IPR008264
Pfam 242 286 45 PF06955 none Xyloglucan endo-transglycosylase (XET) C-terminus IPR010713
PANTHER 8 292 285 PTHR31062:SF20 none none none
Phobius 23 26 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 27 292 266 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 29 289 261 SSF49899 none none IPR013320
Gene3D 22 290 269 G3DSA:2.60.120.200 none none IPR013320
Phobius 1 10 10 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 1 26 26 SIGNAL_PEPTIDE none Signal peptide region none
PIRSF 1 291 291 PIRSF005604 none none IPR016455
PANTHER 8 292 285 PTHR31062 none none none

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 26 25
SignalP_GRAM_NEGATIVE 1 26 25
SignalP_EUK 1 24 23

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting