Protein : Qrob_P0679220.2 Q. robur
Protein Identifier  ? Qrob_P0679220.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR10210:SF34 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 4 (PTHR10210:SF34) Code Enzyme  EC:2.7.6.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 293  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0009116 nucleoside metabolic process The chemical reactions and pathways involving a nucleoside, a nucleobase linked to either beta-D-ribofuranose (a ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleoside), e.g. adenosine, guanosine, inosine, cytidine, uridine and deoxyadenosine, deoxyguanosine, deoxycytidine and thymidine (= deoxythymidine).

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103429247 12 291 + 280 none 88.05 318 91.79 0.0 ribose-phosphate pyrophosphokinase 4
blastp_kegg lcl|mdm:103432161 12 291 + 280 none 88.05 318 91.43 0.0 ribose-phosphate pyrophosphokinase 4-like
blastp_kegg lcl|mdm:103405176 12 291 + 280 none 88.05 318 91.43 0.0 ribose-phosphate pyrophosphokinase 4
blastp_kegg lcl|pxb:103966063 12 291 + 280 none 88.05 318 91.07 0.0 ribose-phosphate pyrophosphokinase 4
blastp_kegg lcl|pxb:103947442 12 291 + 280 none 88.05 318 91.07 0.0 ribose-phosphate pyrophosphokinase 4
blastp_kegg lcl|rcu:RCOM_1643070 12 291 + 280 none 85.89 326 90.00 0.0 Ribose-phosphate pyrophosphokinase putative (EC:2.7.6.1)
blastp_kegg lcl|pper:PRUPE_ppa008810mg 12 292 + 281 Gaps:1 88.33 317 91.07 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0002s06060g 12 292 + 281 none 85.93 327 88.97 0.0 POPTRDRAFT_816182 ribose-phosphate pyrophosphokinase 4 family protein
blastp_kegg lcl|fve:101306736 12 291 + 280 none 87.77 319 88.57 0.0 ribose-phosphate pyrophosphokinase 4-like
blastp_kegg lcl|vvi:100250562 12 292 + 281 none 86.20 326 87.54 0.0 ribose-phosphate pyrophosphokinase 4-like
blastp_pdb 3dah_C 10 288 + 279 Gaps:23 84.01 319 27.99 4e-14 mol:protein length:319 Ribose-phosphate pyrophosphokinase
blastp_pdb 3dah_B 10 288 + 279 Gaps:23 84.01 319 27.99 4e-14 mol:protein length:319 Ribose-phosphate pyrophosphokinase
blastp_pdb 3dah_A 10 288 + 279 Gaps:23 84.01 319 27.99 4e-14 mol:protein length:319 Ribose-phosphate pyrophosphokinase
blastp_pdb 1ibs_B 10 246 + 237 Gaps:23 73.19 317 27.16 5e-14 mol:protein length:317 RIBOSE-PHOSPHATE PYROPHOSPHOKINASE
blastp_pdb 1ibs_A 10 246 + 237 Gaps:23 73.19 317 27.16 5e-14 mol:protein length:317 RIBOSE-PHOSPHATE PYROPHOSPHOKINASE
blastp_pdb 1dku_B 10 246 + 237 Gaps:23 73.19 317 27.16 5e-14 mol:protein length:317 PROTEIN (PHOSPHORIBOSYL PYROPHOSPHATE SYNTHET
blastp_pdb 1dku_A 10 246 + 237 Gaps:23 73.19 317 27.16 5e-14 mol:protein length:317 PROTEIN (PHOSPHORIBOSYL PYROPHOSPHATE SYNTHET
blastp_pdb 1dkr_B 10 246 + 237 Gaps:23 73.19 317 27.16 5e-14 mol:protein length:317 PHOSPHORIBOSYL PYROPHOSPHATE SYNTHETASE
blastp_pdb 1dkr_A 10 246 + 237 Gaps:23 73.19 317 27.16 5e-14 mol:protein length:317 PHOSPHORIBOSYL PYROPHOSPHATE SYNTHETASE
blastp_pdb 2h07_B 28 291 + 264 Gaps:16 78.53 326 23.44 2e-09 mol:protein length:326 Ribose-phosphate pyrophosphokinase I
blastp_uniprot_sprot sp|Q9XGA1|KPRS4_SPIOL 12 292 + 281 none 88.36 318 87.19 0.0 Ribose-phosphate pyrophosphokinase 4 OS Spinacia oleracea GN PRS4 PE 2 SV 1
blastp_uniprot_sprot sp|Q680A5|KPRS4_ARATH 12 292 + 281 none 83.38 337 84.70 0.0 Ribose-phosphate pyrophosphokinase 4 OS Arabidopsis thaliana GN PRS4 PE 2 SV 2
blastp_uniprot_sprot sp|Q9XGA0|KPRS3_SPIOL 12 292 + 281 Gaps:1 69.46 406 77.30 2e-161 Ribose-phosphate pyrophosphokinase 3 mitochondrial OS Spinacia oleracea GN PRS3 PE 2 SV 1
blastp_uniprot_sprot sp|Q93Z66|KPRS3_ARATH 12 292 + 281 Gaps:3 68.61 411 76.95 1e-159 Ribose-phosphate pyrophosphokinase 3 chloroplastic OS Arabidopsis thaliana GN PRS3 PE 2 SV 1
blastp_uniprot_sprot sp|Q8S2E5|KPRS3_ORYSJ 12 292 + 281 Gaps:1 68.95 409 75.53 1e-158 Ribose-phosphate pyrophosphokinase 3 chloroplastic OS Oryza sativa subsp. japonica GN Os01g0723600 PE 2 SV 1
blastp_uniprot_sprot sp|Q6ZFT5|KPRS4_ORYSJ 12 292 + 281 Gaps:1 86.77 325 81.21 2e-158 Ribose-phosphate pyrophosphokinase 4 OS Oryza sativa subsp. japonica GN Os02g0714600 PE 2 SV 1
blastp_uniprot_sprot sp|A6W1C7|KPRS_MARMS 15 291 + 277 Gaps:26 84.76 315 31.46 2e-18 Ribose-phosphate pyrophosphokinase OS Marinomonas sp. (strain MWYL1) GN prs PE 3 SV 1
blastp_uniprot_sprot sp|Q8P137|KPRS2_STRP8 13 236 + 224 Gaps:14 67.48 326 28.64 1e-17 Ribose-phosphate pyrophosphokinase 2 OS Streptococcus pyogenes serotype M18 (strain MGAS8232) GN prs2 PE 3 SV 1
blastp_uniprot_sprot sp|Q7NM67|KPRS_GLOVI 13 266 + 254 Gaps:28 73.49 332 29.51 1e-17 Ribose-phosphate pyrophosphokinase OS Gloeobacter violaceus (strain PCC 7421) GN prs PE 3 SV 1
blastp_uniprot_sprot sp|O67556|KPRS_AQUAE 10 291 + 282 Gaps:23 86.50 311 26.39 2e-17 Ribose-phosphate pyrophosphokinase OS Aquifex aeolicus (strain VF5) GN prs PE 3 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 148 286 139 SSF53271 none none IPR029057
PANTHER 12 292 281 PTHR10210 none none none
Pfam 161 232 72 PF00156 none Phosphoribosyl transferase domain IPR000836
Gene3D 147 266 120 G3DSA:3.40.50.2020 none none IPR029057
Phobius 53 72 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 12 292 281 PTHR10210:SF34 none none none
SUPERFAMILY 5 128 124 SSF53271 none none IPR029057
Gene3D 10 146 137 G3DSA:3.40.50.2020 none none IPR029057
Phobius 1 52 52 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 73 292 220 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran_2000_2002_QTL3_Delta.F Qrob_Chr08 8 s_1A3EF7_1406 s_1AIWYC_607 30.17 21,01 40,21 lod 6.8553 0.055
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2014_nPriLBD_A4 Qrob_Chr08 8 PIE175 v_9164_159 31,85 15,39 48,29 lod 2,8308 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting