Protein : Qrob_P0675760.2 Q. robur
Protein Identifier  ? Qrob_P0675760.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K02133 - F-type H+-transporting ATPase subunit beta [EC:3.6.3.14] Code Enzyme  EC:3.6.3.14
Gene Prediction Quality  validated Protein length 

Sequence

Length: 560  
Kegg Orthology  K02133
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

8 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0015991 ATP hydrolysis coupled proton transport The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis.
GO:0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane.
GO:0015986 ATP synthesis coupled proton transport The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.
GO:0015992 proton transport The directed movement of protons (hydrogen ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0046034 ATP metabolic process The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator.
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain A protein complex that forms part of a proton-transporting two-sector ATPase complex and catalyzes ATP hydrolysis or synthesis. The catalytic domain (F1, V1, or A1) comprises a hexameric catalytic core and a central stalk, and is peripherally associated with the membrane when the two-sector ATPase is assembled.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103338731 4 559 + 556 Gaps:10 99.82 549 89.23 0.0 ATP synthase subunit beta mitochondrial-like
blastp_kegg lcl|sot:102599894 4 559 + 556 Gaps:11 99.82 556 85.77 0.0 ATP synthase subunit beta mitochondrial-like
blastp_kegg lcl|sly:101261919 4 559 + 556 Gaps:10 99.82 557 85.61 0.0 ATP synthase subunit beta mitochondrial-like
blastp_kegg lcl|sot:102584460 4 559 + 556 Gaps:17 99.82 562 85.03 0.0 ATP synthase subunit beta mitochondrial-like
blastp_kegg lcl|sly:101249170 4 559 + 556 Gaps:17 99.82 562 85.20 0.0 ATP synthase subunit beta mitochondrial-like
blastp_kegg lcl|pmum:103341553 4 559 + 556 Gaps:15 99.82 560 86.40 0.0 ATP synthase subunit beta mitochondrial-like
blastp_kegg lcl|mus:103979242 4 559 + 556 Gaps:17 99.82 556 84.86 0.0 ATP synthase subunit beta mitochondrial-like
blastp_kegg lcl|mus:103979935 37 559 + 523 Gaps:8 93.15 555 89.75 0.0 ATP synthase subunit beta mitochondrial-like
blastp_kegg lcl|pda:103705612 4 558 + 555 Gaps:12 99.64 559 85.82 0.0 ATP synthase subunit beta mitochondrial-like
blastp_kegg lcl|fve:101298798 4 558 + 555 Gaps:16 99.82 558 85.82 0.0 ATP synthase subunit beta mitochondrial-like
blastp_pdb 2f43_B 88 559 + 472 Gaps:1 98.33 479 78.98 0.0 mol:protein length:479 ATP synthase beta chain mitochondrial
blastp_pdb 1mab_B 88 559 + 472 Gaps:1 98.33 479 78.98 0.0 mol:protein length:479 PROTEIN (F1-ATPASE BETA CHAIN)
blastp_pdb 1nbm_E 68 556 + 489 Gaps:9 100.00 480 78.54 0.0 mol:protein length:480 F1-ATPASE
blastp_pdb 1nbm_F 68 556 + 489 Gaps:9 100.00 480 78.54 0.0 mol:protein length:480 F1-ATPASE
blastp_pdb 1nbm_D 68 556 + 489 Gaps:9 100.00 480 78.54 0.0 mol:protein length:480 F1-ATPASE
blastp_pdb 2wss_O 68 558 + 491 Gaps:9 100.00 482 78.22 0.0 mol:protein length:482 ATP SYNTHASE SUBUNIT BETA MITOCHONDRIAL
blastp_pdb 2wss_N 68 558 + 491 Gaps:9 100.00 482 78.22 0.0 mol:protein length:482 ATP SYNTHASE SUBUNIT BETA MITOCHONDRIAL
blastp_pdb 2wss_M 68 558 + 491 Gaps:9 100.00 482 78.22 0.0 mol:protein length:482 ATP SYNTHASE SUBUNIT BETA MITOCHONDRIAL
blastp_pdb 2wss_F 68 558 + 491 Gaps:9 100.00 482 78.22 0.0 mol:protein length:482 ATP SYNTHASE SUBUNIT BETA MITOCHONDRIAL
blastp_pdb 2wss_E 68 558 + 491 Gaps:9 100.00 482 78.22 0.0 mol:protein length:482 ATP SYNTHASE SUBUNIT BETA MITOCHONDRIAL
blastp_uniprot_sprot sp|P17614|ATPBM_NICPL 4 559 + 556 Gaps:15 99.82 560 85.33 0.0 ATP synthase subunit beta mitochondrial OS Nicotiana plumbaginifolia GN ATPB PE 1 SV 1
blastp_uniprot_sprot sp|Q01859|ATPBM_ORYSJ 4 559 + 556 Gaps:11 99.82 552 85.30 0.0 ATP synthase subunit beta mitochondrial OS Oryza sativa subsp. japonica GN ATPB PE 1 SV 2
blastp_uniprot_sprot sp|P19023|ATPBM_MAIZE 4 559 + 556 Gaps:8 99.82 553 85.51 0.0 ATP synthase subunit beta mitochondrial OS Zea mays GN ATPB PE 1 SV 1
blastp_uniprot_sprot sp|Q9C5A9|ATPBO_ARATH 35 559 + 525 Gaps:12 92.84 559 85.74 0.0 ATP synthase subunit beta-3 mitochondrial OS Arabidopsis thaliana GN At5g08680 PE 2 SV 1
blastp_uniprot_sprot sp|P29685|ATPBM_HEVBR 79 559 + 481 Gaps:1 85.77 562 90.46 0.0 ATP synthase subunit beta mitochondrial OS Hevea brasiliensis GN ATPB PE 2 SV 1
blastp_uniprot_sprot sp|P83484|ATPBN_ARATH 27 559 + 533 Gaps:14 95.14 556 83.74 0.0 ATP synthase subunit beta-2 mitochondrial OS Arabidopsis thaliana GN At5g08690 PE 1 SV 1
blastp_uniprot_sprot sp|P83483|ATPBM_ARATH 27 559 + 533 Gaps:14 95.14 556 83.74 0.0 ATP synthase subunit beta-1 mitochondrial OS Arabidopsis thaliana GN At5g08670 PE 1 SV 1
blastp_uniprot_sprot sp|P37399|ATPBM_DAUCA 4 557 + 554 Gaps:16 99.45 547 81.43 0.0 ATP synthase subunit beta mitochondrial OS Daucus carota GN ATPB PE 3 SV 1
blastp_uniprot_sprot sp|P38482|ATPBM_CHLRE 90 559 + 470 Gaps:1 82.06 574 81.10 0.0 ATP synthase subunit beta mitochondrial OS Chlamydomonas reinhardtii GN ATP2 PE 1 SV 1
blastp_uniprot_sprot sp|P06576|ATPB_HUMAN 44 559 + 516 Gaps:25 98.87 529 73.61 0.0 ATP synthase subunit beta mitochondrial OS Homo sapiens GN ATP5B PE 1 SV 3

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 80 556 477 PTHR15184 none none none
Hamap 87 553 467 MF_01347 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" ATP synthase subunit beta [atpB]. IPR005722
Phobius 8 18 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 449 552 104 PF00306 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" ATP synthase alpha/beta chain, C terminal domain IPR000793
Phobius 19 25 7 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 214 435 222 PF00006 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" ATP synthase alpha/beta family, nucleotide-binding domain IPR000194
SUPERFAMILY 86 160 75 SSF50615 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" none IPR004100
Gene3D 438 558 121 G3DSA:1.10.1140.10 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" none IPR024034
PIRSF 11 559 549 PIRSF039072 none none none
Phobius 26 559 534 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 92 158 67 PF02874 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" ATP synthase alpha/beta family, beta-barrel domain IPR004100
PANTHER 80 556 477 PTHR15184:SF32 none none none
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 82 160 79 G3DSA:2.40.10.170 none none none
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
TIGRFAM 89 553 465 TIGR01039 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" atpD: ATP synthase F1, beta subunit IPR005722
ProSitePatterns 426 435 10 PS00152 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" ATP synthase alpha and beta subunits signature. IPR020003
SUPERFAMILY 162 440 279 SSF52540 none none IPR027417
Gene3D 162 437 276 G3DSA:3.40.50.300 none none IPR027417
SMART 227 498 272 SM00382 none ATPases associated with a variety of cellular activities IPR003593
SUPERFAMILY 438 554 117 SSF47917 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" none IPR000793

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 12 11

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting