Protein : Qrob_P0675520.2 Q. robur
Protein Identifier  ? Qrob_P0675520.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PTHR10809:SF43 - VESICLE-ASSOCIATED PROTEIN 1-3 (PTHR10809:SF43) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 180  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005789 endoplasmic reticulum membrane The lipid bilayer surrounding the endoplasmic reticulum.

33 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103440574 1 155 + 155 Gaps:24 86.47 207 70.95 2e-81 vesicle-associated protein 1-1-like
blastp_kegg lcl|cam:101499948 1 163 + 163 Gaps:21 75.41 244 67.39 2e-79 vesicle-associated protein 1-2-like
blastp_kegg lcl|mtr:MTR_5g012420 1 143 + 143 Gaps:18 66.26 243 73.29 5e-78 Vesicle-associated membrane protein
blastp_kegg lcl|gmx:100791280 1 154 + 154 Gaps:25 74.27 241 69.83 6e-78 vesicle-associated protein 1-2-like
blastp_kegg lcl|cic:CICLE_v10021928mg 1 154 + 154 Gaps:26 74.07 243 68.89 2e-77 hypothetical protein
blastp_kegg lcl|cit:102610348 1 154 + 154 Gaps:26 74.07 243 68.89 2e-77 vesicle-associated protein 1-1-like
blastp_kegg lcl|gmx:100798247 1 154 + 154 Gaps:25 74.27 241 68.72 2e-77 vesicle-associated protein 1-2-like
blastp_kegg lcl|cam:101492757 1 155 + 155 Gaps:25 74.69 241 75.00 3e-76 vesicle-associated protein 1-2-like
blastp_kegg lcl|mdm:103417003 1 155 + 155 Gaps:26 96.76 185 69.27 6e-76 vesicle-associated protein 1-2-like
blastp_kegg lcl|pop:POPTR_0003s07370g 1 155 + 155 Gaps:25 74.69 241 73.89 9e-76 POPTRDRAFT_817160 hypothetical protein
blastp_pdb 3ikk_B 5 72 + 68 Gaps:1 54.33 127 44.93 3e-11 mol:protein length:127 Vesicle-associated membrane protein-associate
blastp_pdb 3ikk_A 5 72 + 68 Gaps:1 54.33 127 44.93 3e-11 mol:protein length:127 Vesicle-associated membrane protein-associate
blastp_pdb 2rr3_A 11 72 + 62 none 47.69 130 46.77 4e-11 mol:protein length:130 Vesicle-associated membrane protein-associate
blastp_pdb 2cri_A 11 72 + 62 none 42.18 147 45.16 1e-10 mol:protein length:147 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_F 11 72 + 62 none 48.44 128 43.55 3e-10 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_E 11 72 + 62 none 48.44 128 43.55 3e-10 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_D 11 72 + 62 none 48.44 128 43.55 3e-10 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_C 11 72 + 62 none 48.44 128 43.55 3e-10 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_B 11 72 + 62 none 48.44 128 43.55 3e-10 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_pdb 1z9o_A 11 72 + 62 none 48.44 128 43.55 3e-10 mol:protein length:128 Vesicle-associated membrane protein-associate
blastp_uniprot_sprot sp|Q8VZ95|VAP11_ARATH 1 137 + 137 Gaps:18 60.55 256 67.74 3e-68 Vesicle-associated protein 1-1 OS Arabidopsis thaliana GN PVA11 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SHC8|VAP12_ARATH 3 155 + 153 Gaps:23 73.64 239 61.36 1e-66 Vesicle-associated protein 1-2 OS Arabidopsis thaliana GN PVA12 PE 1 SV 1
blastp_uniprot_sprot sp|Q84WW5|VAP13_ARATH 1 155 + 155 Gaps:24 74.06 239 54.24 3e-54 Vesicle-associated protein 1-3 OS Arabidopsis thaliana GN PVA13 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SYC9|VAP14_ARATH 1 137 + 137 Gaps:36 53.94 571 55.19 3e-51 Vesicle-associated protein 1-4 OS Arabidopsis thaliana GN PVA14 PE 2 SV 1
blastp_uniprot_sprot sp|O82213|VAP31_ARATH 1 108 + 108 Gaps:18 84.56 149 57.94 2e-42 Vesicle-associated protein 3-1 OS Arabidopsis thaliana GN PVA31 PE 3 SV 1
blastp_uniprot_sprot sp|B9DHD7|VAP22_ARATH 6 135 + 130 Gaps:22 37.31 386 47.22 6e-32 Vesicle-associated protein 2-2 OS Arabidopsis thaliana GN PVA22 PE 1 SV 1
blastp_uniprot_sprot sp|Q9LVU1|VAP21_ARATH 5 155 + 151 Gaps:27 72.73 220 42.50 5e-31 Vesicle-associated protein 2-1 OS Arabidopsis thaliana GN PVA21 PE 2 SV 1
blastp_uniprot_sprot sp|Q16943|VP33_APLCA 2 143 + 142 Gaps:30 57.69 260 32.67 9e-13 Vesicle-associated membrane protein/synaptobrevin-binding protein OS Aplysia californica PE 2 SV 1
blastp_uniprot_sprot sp|O60119|YH75_SCHPO 38 142 + 105 Gaps:27 32.90 383 36.51 2e-10 Vesicle-associated membrane protein-associated protein C16G5.05c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPBC16G5.05c PE 1 SV 1
blastp_uniprot_sprot sp|Q5R601|VAPA_PONAB 11 72 + 62 none 24.90 249 46.77 2e-10 Vesicle-associated membrane protein-associated protein A OS Pongo abelii GN VAPA PE 2 SV 2

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 2 123 122 SSF49354 none none IPR008962
Gene3D 3 105 103 G3DSA:2.60.40.360 none none IPR008962
PANTHER 1 136 136 PTHR10809:SF43 none none none
ProSiteProfiles 6 108 103 PS50202 none Major sperm protein (MSP) domain profile. IPR000535
Pfam 7 77 71 PF00635 none MSP (Major sperm protein) domain IPR000535
PANTHER 1 136 136 PTHR10809 "Reactome:REACT_22258";signature_desc=VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN none IPR016763

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting