Protein : Qrob_P0671240.2 Q. robur
Protein Identifier  ? Qrob_P0671240.2 Organism . Name  Quercus robur
Score  96.1 Score Type  egn
Protein Description  (M=14) K13648 - alpha-1,4-galacturonosyltransferase [EC:2.4.1.43] Code Enzyme  EC:2.4.1.43
Gene Prediction Quality  validated Protein length 

Sequence

Length: 660  
Kegg Orthology  K13648
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016757 transferase activity, transferring glycosyl groups Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity Catalysis of the reaction: UDP-D-galacturonate + 1,4-alpha-D-galacturonosyl(n) = 1,4-alpha-D-galacturonosyl(n+1) + UDP.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa002418mg 1 659 + 659 Gaps:25 100.00 674 81.16 0.0 hypothetical protein
blastp_kegg lcl|pmum:103331935 1 659 + 659 Gaps:26 100.00 675 81.04 0.0 polygalacturonate 4-alpha-galacturonosyltransferase
blastp_kegg lcl|mdm:103405701 1 659 + 659 Gaps:24 100.00 675 80.74 0.0 polygalacturonate 4-alpha-galacturonosyltransferase
blastp_kegg lcl|pxb:103964624 1 659 + 659 Gaps:32 100.00 683 80.23 0.0 polygalacturonate 4-alpha-galacturonosyltransferase
blastp_kegg lcl|tcc:TCM_005461 1 659 + 659 Gaps:23 100.00 676 78.85 0.0 Galacturonosyltransferase 1
blastp_kegg lcl|cic:CICLE_v10019146mg 1 659 + 659 Gaps:24 100.00 683 78.33 0.0 hypothetical protein
blastp_kegg lcl|cit:102613128 1 659 + 659 Gaps:24 100.00 683 78.33 0.0 polygalacturonate 4-alpha-galacturonosyltransferase-like
blastp_kegg lcl|fve:101305979 1 659 + 659 Gaps:31 100.00 678 78.17 0.0 polygalacturonate 4-alpha-galacturonosyltransferase-like
blastp_kegg lcl|csv:101223005 1 659 + 659 Gaps:24 100.00 679 76.44 0.0 polygalacturonate 4-alpha-galacturonosyltransferase-like
blastp_kegg lcl|csv:101204306 1 659 + 659 Gaps:24 100.00 679 76.44 0.0 polygalacturonate 4-alpha-galacturonosyltransferase-like
blastp_uniprot_sprot sp|Q9LE59|GAUT1_ARATH 1 659 + 659 Gaps:28 100.00 673 74.15 0.0 Polygalacturonate 4-alpha-galacturonosyltransferase OS Arabidopsis thaliana GN GAUT1 PE 1 SV 1
blastp_uniprot_sprot sp|Q0WQD2|GAUT3_ARATH 44 659 + 616 Gaps:21 92.79 680 56.10 0.0 Probable galacturonosyltransferase 3 OS Arabidopsis thaliana GN GAUT3 PE 2 SV 2
blastp_uniprot_sprot sp|Q93ZX7|GAUT4_ARATH 198 658 + 461 Gaps:4 74.19 616 63.46 0.0 Probable galacturonosyltransferase 4 OS Arabidopsis thaliana GN GAUT4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZPZ1|GAUT2_ARATH 131 659 + 529 Gaps:30 94.89 528 61.88 0.0 Putative galacturonosyltransferase 2 OS Arabidopsis thaliana GN GAUT2 PE 5 SV 1
blastp_uniprot_sprot sp|Q9LSG3|GAUT8_ARATH 257 658 + 402 Gaps:6 71.91 559 55.72 2e-161 Galacturonosyltransferase 8 OS Arabidopsis thaliana GN GAUT8 PE 1 SV 1
blastp_uniprot_sprot sp|Q949Q1|GAUTB_ARATH 193 655 + 463 Gaps:14 86.59 537 49.03 3e-156 Probable galacturonosyltransferase 11 OS Arabidopsis thaliana GN GAUT11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FWA4|GAUT9_ARATH 243 657 + 415 Gaps:3 73.80 561 53.86 2e-147 Probable galacturonosyltransferase 9 OS Arabidopsis thaliana GN GAUT9 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SKT6|GAUTA_ARATH 199 657 + 459 Gaps:13 86.19 536 47.40 2e-146 Probable galacturonosyltransferase 10 OS Arabidopsis thaliana GN GAUT10 PE 2 SV 2
blastp_uniprot_sprot sp|Q8RXE1|GAUT5_ARATH 197 657 + 461 Gaps:29 71.80 610 46.12 7e-138 Probable galacturonosyltransferase 5 OS Arabidopsis thaliana GN GAUT5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M9Y5|GAUT6_ARATH 197 657 + 461 Gaps:28 74.53 589 45.79 2e-134 Probable galacturonosyltransferase 6 OS Arabidopsis thaliana GN GAUT6 PE 2 SV 1
rpsblast_cdd gnl|CDD|178498 31 659 + 629 Gaps:25 98.63 657 58.18 0.0 PLN02910 PLN02910 polygalacturonate 4-alpha-galacturonosyltransferase.
rpsblast_cdd gnl|CDD|178423 27 657 + 631 Gaps:25 97.97 639 52.24 0.0 PLN02829 PLN02829 Probable galacturonosyltransferase.
rpsblast_cdd gnl|CDD|178343 196 658 + 463 Gaps:9 86.89 534 50.86 1e-171 PLN02742 PLN02742 Probable galacturonosyltransferase.
rpsblast_cdd gnl|CDD|178138 257 655 + 399 Gaps:6 71.38 559 56.14 1e-159 PLN02523 PLN02523 galacturonosyltransferase.
rpsblast_cdd gnl|CDD|178320 27 659 + 633 Gaps:68 97.68 603 42.78 1e-158 PLN02718 PLN02718 Probable galacturonosyltransferase.
rpsblast_cdd gnl|CDD|178368 183 655 + 473 Gaps:19 73.45 629 38.10 1e-113 PLN02769 PLN02769 Probable galacturonosyltransferase.
rpsblast_cdd gnl|CDD|166511 263 659 + 397 Gaps:17 77.67 533 44.20 1e-110 PLN02870 PLN02870 Probable galacturonosyltransferase.
rpsblast_cdd gnl|CDD|133051 348 646 + 299 Gaps:46 100.00 257 54.86 1e-100 cd06429 GT8_like_1 GT8_like_1 represents a subfamily of GT8 with unknown function. A subfamily of glycosyltransferase family 8 with unknown function: Glycosyltransferase family 8 comprises enzymes with a number of known activities lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1 glycogenin glucosyltransferase and inositol 1-alpha-galactosyltransferase. It is classified as a retaining glycosyltransferase based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed.
rpsblast_cdd gnl|CDD|178265 263 657 + 395 Gaps:17 77.15 534 39.81 2e-99 PLN02659 PLN02659 Probable galacturonosyltransferase.
rpsblast_cdd gnl|CDD|178458 239 657 + 419 Gaps:15 81.12 535 37.10 7e-92 PLN02867 PLN02867 Probable galacturonosyltransferase.

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 5 659 655 PTHR32116 "UniPathway:UPA00845";signature_desc=FAMILY NOT NAMED none IPR029993
Phobius 1 20 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Coils 279 300 22 Coil none none none
Coils 227 248 22 Coil none none none
PANTHER 5 659 655 PTHR32116:SF4 none none none
Phobius 41 659 619 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 21 40 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 318 632 315 PF01501 none Glycosyl transferase family 8 IPR002495
SUPERFAMILY 348 417 70 SSF53448 none none IPR029044
SUPERFAMILY 453 655 203 SSF53448 none none IPR029044
Gene3D 350 419 70 G3DSA:3.90.550.10 none none IPR029044
Gene3D 455 655 201 G3DSA:3.90.550.10 none none IPR029044

1 Localization

Analysis Start End Length
TMHMM 21 40 19

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting