Protein : Qrob_P0670480.2 Q. robur
Protein Identifier  ? Qrob_P0670480.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) 4.1.1.50 - Adenosylmethionine decarboxylase. Code Enzyme  EC:4.1.1.50
Gene Prediction Quality  validated Protein length 

Sequence

Length: 414  
Kegg Orthology  K01611
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0004014 adenosylmethionine decarboxylase activity Catalysis of the reaction: S-adenosyl-L-methionine + H(+) = S-adenosylmethioninamine + CO(2).
GO:0006597 spermine biosynthetic process The chemical reactions and pathways resulting in the formation of spermine, a polybasic amine found in human sperm, in ribosomes and in some viruses and involved in nucleic acid packaging.
GO:0008295 spermidine biosynthetic process The chemical reactions and pathways resulting in the formation of spermidine, N-(3-aminopropyl)-1,4-diaminobutane.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_019632 21 413 + 393 Gaps:2 94.24 417 74.81 0.0 S-adenosylmethionine decarboxylase proenzyme isoform 1
blastp_kegg lcl|pmum:103329636 21 402 + 382 Gaps:15 92.72 426 75.95 0.0 S-adenosylmethionine decarboxylase proenzyme-like
blastp_kegg lcl|vvi:100240686 21 401 + 381 Gaps:6 93.90 410 75.84 0.0 SAMDC S-adenosylmethionine decarboxylase proenzyme
blastp_kegg lcl|cmo:103500152 21 410 + 390 Gaps:10 95.22 418 73.37 0.0 SAMDC S-adenosylmethionine decarboxylase
blastp_kegg lcl|cic:CICLE_v10013866mg 53 413 + 361 Gaps:1 99.72 361 78.89 0.0 hypothetical protein
blastp_kegg lcl|fve:101290852 21 409 + 389 Gaps:6 96.09 409 72.26 0.0 S-adenosylmethionine decarboxylase proenzyme-like isoform 1
blastp_kegg lcl|rcu:RCOM_0596710 53 402 + 350 Gaps:3 96.66 359 77.81 0.0 s-adenosylmethionine decarboxylase putative (EC:4.1.1.50)
blastp_kegg lcl|cic:CICLE_v10033607mg 21 401 + 381 Gaps:9 81.51 476 71.39 0.0 hypothetical protein
blastp_kegg lcl|sly:101262142 22 411 + 390 Gaps:7 95.87 412 70.89 0.0 S-adenosylmethionine decarboxylase proenzyme-like
blastp_kegg lcl|pop:POPTR_0017s14280g 53 402 + 350 Gaps:1 96.68 361 77.36 0.0 S-adenosylmethionine decarboxylase family protein
blastp_pdb 1mhm_A 123 401 + 279 Gaps:1 96.53 288 68.71 2e-134 mol:protein length:288 S-adenosylmethionine decarboxylase
blastp_pdb 1msv_B 61 342 + 282 Gaps:12 78.53 354 38.13 9e-44 mol:protein length:354 S-adenosylmethionine decarboxylase proenzyme
blastp_pdb 1msv_A 61 342 + 282 Gaps:12 78.53 354 38.13 9e-44 mol:protein length:354 S-adenosylmethionine decarboxylase proenzyme
blastp_pdb 1jl0_B 61 342 + 282 Gaps:12 83.23 334 37.77 4e-42 mol:protein length:334 S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME
blastp_pdb 1jl0_A 61 342 + 282 Gaps:12 83.23 334 37.77 4e-42 mol:protein length:334 S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME
blastp_pdb 1mhm_B 54 121 + 68 none 94.44 72 83.82 9e-32 mol:protein length:72 S-adenosylmethionine decarboxylase
blastp_pdb 3ep6_A 123 342 + 220 Gaps:12 83.08 260 38.43 1e-29 mol:protein length:260 S-adenosylmethionine decarboxylase alpha chai
blastp_pdb 3ep3_A 123 342 + 220 Gaps:12 83.08 260 38.43 1e-29 mol:protein length:260 S-adenosylmethionine decarboxylase alpha chai
blastp_pdb 1jen_C 123 342 + 220 Gaps:12 80.90 267 38.43 1e-29 mol:protein length:267 PROTEIN (S-ADENOSYLMETHIONINE DECARBOXYLASE (
blastp_pdb 1jen_A 123 342 + 220 Gaps:12 80.90 267 38.43 1e-29 mol:protein length:267 PROTEIN (S-ADENOSYLMETHIONINE DECARBOXYLASE (
blastp_uniprot_sprot sp|Q42679|DCAM_CATRO 53 409 + 357 Gaps:1 99.72 357 72.75 0.0 S-adenosylmethionine decarboxylase proenzyme OS Catharanthus roseus GN SAMDC PE 1 SV 1
blastp_uniprot_sprot sp|Q96471|DCAM_IPONI 53 413 + 361 Gaps:2 99.17 362 72.14 0.0 S-adenosylmethionine decarboxylase proenzyme OS Ipomoea nil GN SAMDC PE 3 SV 1
blastp_uniprot_sprot sp|Q9M6K1|DCAM_IPOBA 53 413 + 361 Gaps:2 99.17 362 71.59 0.0 S-adenosylmethionine decarboxylase proenzyme OS Ipomoea batatas GN SAMDC PE 2 SV 1
blastp_uniprot_sprot sp|O04009|DCAM_TOBAC 52 401 + 350 Gaps:1 96.68 361 73.07 0.0 S-adenosylmethionine decarboxylase proenzyme OS Nicotiana tabacum GN SAMDC PE 2 SV 1
blastp_uniprot_sprot sp|O80402|DCAM_NICSY 53 401 + 349 Gaps:1 96.40 361 72.99 1e-180 S-adenosylmethionine decarboxylase proenzyme OS Nicotiana sylvestris GN SAMDC1 PE 2 SV 1
blastp_uniprot_sprot sp|O65354|DCAM_HELAN 56 409 + 354 Gaps:8 99.72 361 69.72 1e-178 S-adenosylmethionine decarboxylase proenzyme OS Helianthus annuus GN SAMDC PE 2 SV 1
blastp_uniprot_sprot sp|Q04694|DCAM_SOLTU 54 401 + 348 Gaps:1 96.39 360 71.76 3e-178 S-adenosylmethionine decarboxylase proenzyme OS Solanum tuberosum GN SAMDC PE 1 SV 1
blastp_uniprot_sprot sp|Q96555|DCAM_DATST 54 401 + 348 Gaps:1 95.86 362 70.89 5e-177 S-adenosylmethionine decarboxylase proenzyme OS Datura stramonium GN SAMDC PE 2 SV 1
blastp_uniprot_sprot sp|Q38IY3|DCAM_SOLCI 54 401 + 348 Gaps:1 96.93 358 70.89 3e-176 S-adenosylmethionine decarboxylase proenzyme OS Solanum chilense GN SAMDC PE 2 SV 1
blastp_uniprot_sprot sp|Q9AXE3|DCAM_DAUCA 53 401 + 349 Gaps:2 96.68 361 69.63 2e-175 S-adenosylmethionine decarboxylase proenzyme OS Daucus carota GN SAMDC PE 2 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 64 377 314 SSF56276 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331" none IPR016067
ProSitePatterns 116 126 11 PS01336 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331" S-adenosylmethionine decarboxylase signature. IPR018166
Pfam 1 52 52 PF08132 none S-adenosyl-l-methionine decarboxylase leader peptide IPR012511
TIGRFAM 61 387 327 TIGR00535 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331" SAM_DCase: S-adenosylmethionine decarboxylase proenzyme IPR018167
PANTHER 49 405 357 PTHR11570 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331";signature_desc=S-ADENOSYLMETHIONINE DECARBOXYLASE none IPR001985
Gene3D 57 388 332 G3DSA:3.60.90.10 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331" none IPR016067
Pfam 57 387 331 PF01536 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331" Adenosylmethionine decarboxylase IPR001985
PIRSF 44 392 349 PIRSF001355 "KEGG:00270+4.1.1.50","KEGG:00330+4.1.1.50","MetaCyc:PWY-6834","UniPathway:UPA00331" none IPR018167
PANTHER 49 405 357 PTHR11570:SF0 none none none

0 Localization

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03

0 Targeting