Protein : Qrob_P0668830.2 Q. robur
Protein Identifier  ? Qrob_P0668830.2 Organism . Name  Quercus robur
Score  98.0 Score Type  egn
Protein Description  (M=1) PTHR10997:SF7 - IMPORTIN 11 (IMP11) (RAN-BINDING PROTEIN 11) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1046  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0008536 Ran GTPase binding Interacting selectively and non-covalently with Ran, a conserved Ras-like GTP-binding protein, implicated in nucleocytoplasmic transport, cell cycle progression, spindle assembly, nuclear organization and nuclear envelope (NE) assembly.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100248949 1 1045 + 1045 Gaps:76 100.00 1011 82.69 0.0 importin-11-like
blastp_kegg lcl|cit:102616899 1 1044 + 1044 Gaps:76 99.90 1011 82.48 0.0 importin-11-like
blastp_kegg lcl|cic:CICLE_v10010971mg 1 1044 + 1044 Gaps:76 99.90 1011 82.38 0.0 hypothetical protein
blastp_kegg lcl|pmum:103324293 1 1044 + 1044 Gaps:104 99.90 1039 79.19 0.0 importin-11
blastp_kegg lcl|tcc:TCM_021656 1 1045 + 1045 Gaps:125 100.00 1060 78.58 0.0 ARM repeat superfamily protein isoform 1
blastp_kegg lcl|pxb:103965034 1 1044 + 1044 Gaps:75 99.90 1010 79.88 0.0 importin-11
blastp_kegg lcl|gmx:100780767 1 1044 + 1044 Gaps:76 99.90 1009 80.06 0.0 importin-11-like
blastp_kegg lcl|fve:101306420 1 1044 + 1044 Gaps:75 99.90 1010 81.47 0.0 importin-11-like
blastp_kegg lcl|gmx:100785151 1 1044 + 1044 Gaps:76 99.31 1015 79.46 0.0 importin-11-like
blastp_kegg lcl|rcu:RCOM_0489610 1 1045 + 1045 Gaps:76 100.00 1011 80.51 0.0 importin putative
blastp_pdb 1z3h_B 6 162 + 157 Gaps:7 16.12 968 27.56 2e-08 mol:protein length:968 Importin alpha re-exporter
blastp_pdb 1z3h_A 6 162 + 157 Gaps:7 16.12 968 27.56 2e-08 mol:protein length:968 Importin alpha re-exporter
blastp_pdb 1wa5_C 6 162 + 157 Gaps:7 16.25 960 27.56 2e-08 mol:protein length:960 IMPORTIN ALPHA RE-EXPORTER
blastp_uniprot_sprot sp|Q9UI26|IPO11_HUMAN 14 1043 + 1030 Gaps:93 98.56 975 30.07 4e-116 Importin-11 OS Homo sapiens GN IPO11 PE 1 SV 1
blastp_uniprot_sprot sp|Q8K2V6|IPO11_MOUSE 14 1043 + 1030 Gaps:93 98.56 975 29.66 1e-115 Importin-11 OS Mus musculus GN Ipo11 PE 1 SV 1
blastp_uniprot_sprot sp|Q02932|KA120_YEAST 24 785 + 762 Gaps:91 70.25 1032 27.03 3e-32 Importin beta-like protein KAP120 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN KAP120 PE 1 SV 1
blastp_uniprot_sprot sp|O94545|KA113_SCHPO 9 825 + 817 Gaps:43 62.97 983 24.56 1e-21 Importin beta-like protein kap113 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN kap113 PE 3 SV 1
blastp_uniprot_sprot sp|Q7SZC2|XPO2_DANRE 1 204 + 204 Gaps:19 21.94 971 28.17 2e-11 Exportin-2 OS Danio rerio GN cse1l PE 2 SV 1
blastp_uniprot_sprot sp|Q6GMY9|XPO2_XENLA 1 152 + 152 Gaps:11 16.17 971 28.66 2e-10 Exportin-2 OS Xenopus laevis GN cse1l PE 2 SV 1
blastp_uniprot_sprot sp|Q9XZU1|XPO2_DROME 1 152 + 152 Gaps:16 16.41 975 26.25 1e-09 Exportin-2 OS Drosophila melanogaster GN Cas PE 2 SV 2
blastp_uniprot_sprot sp|Q8AY73|XPO2_ORENI 1 204 + 204 Gaps:19 21.94 971 28.64 1e-09 Exportin-2 OS Oreochromis niloticus GN cse1l PE 2 SV 1
blastp_uniprot_sprot sp|Q9PTU3|XPO2_PAGMA 1 204 + 204 Gaps:19 21.94 971 28.17 2e-09 Exportin-2 OS Pagrus major GN cse1l PE 2 SV 1
blastp_uniprot_sprot sp|P55060|XPO2_HUMAN 1 152 + 152 Gaps:11 16.17 971 29.30 3e-09 Exportin-2 OS Homo sapiens GN CSE1L PE 1 SV 3
rpsblast_cdd gnl|CDD|35216 6 818 + 813 Gaps:40 57.76 947 21.94 6e-19 COG5657 CSE1 CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning].
rpsblast_cdd gnl|CDD|35215 7 144 + 138 Gaps:5 14.33 970 24.46 5e-10 COG5656 SXM1 Importin protein involved in nuclear import [Posttranslational modification protein turnover chaperones].
rpsblast_cdd gnl|CDD|202774 29 102 + 74 Gaps:7 97.18 71 39.13 7e-09 pfam03810 IBN_N Importin-beta N-terminal domain.
rpsblast_cdd gnl|CDD|197981 29 102 + 74 Gaps:9 97.01 67 35.38 9e-08 smart00913 IBN_N Importin-beta N-terminal domain. Members of the importin-beta (karyopherin-beta) family can bind and transport cargo by themselves or can form heterodimers with importin-alpha. As part of a heterodimer importin-beta mediates interactions with the pore complex while importin-alpha acts as an adaptor protein to bind the nuclear localisation signal (NLS) on the cargo through the classical NLS import of proteins. Importin-beta is a helicoidal molecule constructed from 19 HEAT repeats. Many nuclear pore proteins contain FG sequence repeats that can bind to HEAT repeats within importins.. which is important for importin-beta mediated transport.
rpsblast_kog gnl|CDD|37204 10 1043 + 1034 Gaps:138 99.80 978 36.37 0.0 KOG1993 KOG1993 KOG1993 Nuclear transport receptor KAP120 (importin beta superfamily) [Nuclear structure Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|37485 10 149 + 140 Gaps:6 14.13 1005 37.32 2e-19 KOG2274 KOG2274 KOG2274 Predicted importin 9 [Intracellular trafficking secretion and vesicular transport Nuclear structure].
rpsblast_kog gnl|CDD|37203 6 152 + 147 Gaps:10 15.94 960 32.03 8e-16 KOG1992 KOG1992 KOG1992 Nuclear export receptor CSE1/CAS (importin beta superfamily) [Nuclear structure Intracellular trafficking secretion and vesicular transport].

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 923 1041 119 G3DSA:1.25.10.10 none none IPR011989
Gene3D 429 879 451 G3DSA:1.25.10.10 none none IPR011989
Gene3D 5 366 362 G3DSA:1.25.10.10 none none IPR011989
Pfam 29 102 74 PF03810 none Importin-beta N-terminal domain IPR001494
PANTHER 422 914 493 PTHR10997 none none none
PANTHER 938 1027 90 PTHR10997 none none none
PANTHER 422 914 493 PTHR10997:SF7 none none none
PANTHER 1 361 361 PTHR10997 none none none
SUPERFAMILY 923 1040 118 SSF48371 none none IPR016024
SUPERFAMILY 420 885 466 SSF48371 none none IPR016024
SUPERFAMILY 1 357 357 SSF48371 none none IPR016024
SMART 29 104 76 SM00913 none Importin-beta N-terminal domain IPR001494
PANTHER 938 1027 90 PTHR10997:SF7 none none none
PANTHER 1 361 361 PTHR10997:SF7 none none none
ProSiteProfiles 29 104 76 PS50166 none Importin-beta N-terminal domain profile. IPR001494

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting