Protein : Qrob_P0667550.2 Q. robur
Protein Identifier  ? Qrob_P0667550.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) 6.1.1.15 - Proline--tRNA ligase. Code Enzyme  EC:6.1.1.15
Gene Prediction Quality  validated Protein length 

Sequence

Length: 530  
Kegg Orthology  K01881
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004812 aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO:0006418 tRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO:0004827 proline-tRNA ligase activity Catalysis of the reaction: ATP + L-proline + tRNA(Pro) = AMP + diphosphate + L-prolyl-tRNA(Pro).
GO:0006433 prolyl-tRNA aminoacylation The process of coupling proline to prolyl-tRNA, catalyzed by prolyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pvu:PHAVU_001G218300g 22 529 + 508 Gaps:1 99.80 510 87.23 0.0 hypothetical protein
blastp_kegg lcl|gmx:100782067 1 529 + 529 Gaps:14 100.00 515 87.18 0.0 bifunctional glutamate/proline--tRNA ligase-like
blastp_kegg lcl|pop:POPTR_0002s18810g 35 529 + 495 none 99.40 498 88.28 0.0 POPTRDRAFT_552617 tRNA synthetase-related family protein
blastp_kegg lcl|cmo:103494536 44 529 + 486 none 95.11 511 88.07 0.0 putative proline--tRNA ligase C19C7.06
blastp_kegg lcl|gmx:100816763 44 529 + 486 none 94.37 515 88.27 0.0 bifunctional glutamate/proline--tRNA ligase-like
blastp_kegg lcl|csv:101211125 44 529 + 486 none 95.11 511 87.24 0.0 bifunctional glutamate/proline--tRNA ligase-like
blastp_kegg lcl|sot:102603089 35 529 + 495 none 96.12 515 85.66 0.0 putative proline--tRNA ligase C19C7.06-like
blastp_kegg lcl|cmo:103503756 44 529 + 486 none 95.11 511 86.83 0.0 putative proline--tRNA ligase C19C7.06
blastp_kegg lcl|sly:101260238 35 529 + 495 none 96.12 515 85.45 0.0 putative proline--tRNA ligase C19C7.06-like
blastp_kegg lcl|cam:101488280 1 529 + 529 Gaps:9 100.00 520 85.00 0.0 bifunctional glutamate/proline--tRNA ligase-like
blastp_pdb 1hc7_D 40 519 + 480 Gaps:15 97.48 477 44.73 2e-126 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1hc7_C 40 519 + 480 Gaps:15 97.48 477 44.73 2e-126 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1hc7_B 40 519 + 480 Gaps:15 97.48 477 44.73 2e-126 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1hc7_A 40 519 + 480 Gaps:15 97.48 477 44.73 2e-126 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1h4t_D 40 519 + 480 Gaps:15 97.48 477 44.73 2e-126 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1h4t_C 40 519 + 480 Gaps:15 97.48 477 44.73 2e-126 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1h4t_B 40 519 + 480 Gaps:15 97.48 477 44.73 2e-126 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1h4t_A 40 519 + 480 Gaps:15 97.48 477 44.73 2e-126 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1h4s_B 40 519 + 480 Gaps:15 97.48 477 44.73 2e-126 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_pdb 1h4s_A 40 519 + 480 Gaps:15 97.48 477 44.73 2e-126 mol:protein length:477 PROLYL-TRNA SYNTHETASE
blastp_uniprot_sprot sp|O60155|PRS1_SCHPO 24 529 + 506 Gaps:40 75.70 716 53.87 0.0 Putative proline--tRNA ligase C19C7.06 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN prs1 PE 3 SV 1
blastp_uniprot_sprot sp|Q8I5R7|SYP_PLAF7 46 529 + 484 Gaps:11 66.35 746 54.14 0.0 Proline--tRNA ligase OS Plasmodium falciparum (isolate 3D7) GN proRS PE 1 SV 1
blastp_uniprot_sprot sp|P38708|YHI0_YEAST 46 529 + 484 Gaps:22 73.26 688 54.17 0.0 Putative proline--tRNA ligase YHR020W OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN YHR020W PE 1 SV 1
blastp_uniprot_sprot sp|P07814|SYEP_HUMAN 41 529 + 489 Gaps:19 33.33 1512 56.55 0.0 Bifunctional glutamate/proline--tRNA ligase OS Homo sapiens GN EPRS PE 1 SV 5
blastp_uniprot_sprot sp|Q8CGC7|SYEP_MOUSE 41 529 + 489 Gaps:17 33.33 1512 56.15 0.0 Bifunctional glutamate/proline--tRNA ligase OS Mus musculus GN Eprs PE 1 SV 4
blastp_uniprot_sprot sp|P28668|SYEP_DROME 18 529 + 512 Gaps:23 30.63 1714 54.10 0.0 Bifunctional glutamate/proline--tRNA ligase OS Drosophila melanogaster GN Aats-glupro PE 1 SV 2
blastp_uniprot_sprot sp|Q8SSD7|SYP_ENCCU 46 529 + 484 Gaps:16 99.00 501 48.19 4e-177 Proline--tRNA ligase OS Encephalitozoon cuniculi (strain GB-M1) GN ECU02_1360 PE 1 SV 2
blastp_uniprot_sprot sp|A0Q2I3|SYP_CLONN 41 529 + 489 Gaps:15 99.58 478 45.17 2e-144 Proline--tRNA ligase OS Clostridium novyi (strain NT) GN proS PE 3 SV 1
blastp_uniprot_sprot sp|Q9L4Q8|SYP_CLOSD 49 529 + 481 Gaps:23 97.71 481 44.89 2e-141 Proline--tRNA ligase OS Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) GN proS PE 1 SV 1
blastp_uniprot_sprot sp|B2A5T8|SYP_NATTJ 49 529 + 481 Gaps:15 97.72 483 44.92 2e-140 Proline--tRNA ligase OS Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN proS PE 3 SV 1

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 48 326 279 G3DSA:3.30.930.10 none none none
Pfam 333 429 97 PF03129 none Anticodon binding domain IPR004154
Pfam 456 529 74 PF09180 "KEGG:00970+6.1.1.15" Prolyl-tRNA synthetase, C-terminal IPR016061
ProSiteProfiles 88 326 239 PS50862 "Reactome:REACT_71" Aminoacyl-transfer RNA synthetases class-II family profile. IPR006195
SUPERFAMILY 54 319 266 SSF55681 none none none
Pfam 88 231 144 PF00587 "Reactome:REACT_71" tRNA synthetase class II core domain (G, H, P, S and T) IPR002314
Gene3D 450 528 79 G3DSA:3.30.110.30 "KEGG:00970+6.1.1.15" none IPR016061
PANTHER 47 472 426 PTHR11451:SF21 none none none
PRINTS 188 199 12 PR01046 "KEGG:00970+6.1.1.15" Prolyl-tRNA synthetase signature IPR002316
PRINTS 107 125 19 PR01046 "KEGG:00970+6.1.1.15" Prolyl-tRNA synthetase signature IPR002316
PRINTS 148 159 12 PR01046 "KEGG:00970+6.1.1.15" Prolyl-tRNA synthetase signature IPR002316
PRINTS 178 186 9 PR01046 "KEGG:00970+6.1.1.15" Prolyl-tRNA synthetase signature IPR002316
TIGRFAM 51 529 479 TIGR00408 "KEGG:00970+6.1.1.15" proS_fam_I: proline--tRNA ligase IPR004499
ProSitePatterns 494 512 19 PS00128 none Alpha-lactalbumin / lysozyme C signature. IPR019799
Gene3D 327 447 121 G3DSA:3.40.50.800 none none IPR004154
SUPERFAMILY 321 447 127 SSF52954 none none IPR004154
Hamap 49 529 481 MF_01571 "KEGG:00970+6.1.1.15" Proline--tRNA ligase [proS]. IPR004499
PANTHER 47 472 426 PTHR11451 none none none
SUPERFAMILY 451 529 79 SSF64586 "KEGG:00970+6.1.1.15" none IPR017449
SMART 456 529 74 SM00946 "KEGG:00970+6.1.1.15" Prolyl-tRNA synthetase, C-terminal IPR016061

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting