Protein : Qrob_P0664620.2 Q. robur
Protein Identifier  ? Qrob_P0664620.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) PTHR11766 - TYROSYL-TRNA SYNTHETASE Code Enzyme  EC:6.1.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 205  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004812 aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO:0006418 tRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO:0004831 tyrosine-tRNA ligase activity Catalysis of the reaction: L-tyrosine + ATP + tRNA(Tyr) = L-tyrosyl-tRNA(Tyr) + AMP + diphosphate + 2 H(+).

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101303425 27 204 + 178 Gaps:21 38.40 487 40.64 1e-30 tyrosine--tRNA ligase-like
blastp_kegg lcl|vvi:100246653 19 204 + 186 Gaps:25 41.20 483 39.70 1e-30 tyrosyl-tRNA synthetase-like
blastp_kegg lcl|fve:101306542 27 203 + 177 Gaps:20 38.80 482 39.04 6e-30 tyrosine--tRNA ligase-like
blastp_kegg lcl|mdm:103425401 39 204 + 166 Gaps:16 36.93 482 41.57 2e-29 probable tyrosine--tRNA ligase mitochondrial
blastp_kegg lcl|mdm:103402523 39 204 + 166 Gaps:16 36.63 486 41.57 2e-29 probable tyrosine--tRNA ligase mitochondrial
blastp_kegg lcl|pxb:103940367 39 204 + 166 Gaps:16 36.63 486 41.01 3e-29 probable tyrosine--tRNA ligase mitochondrial
blastp_kegg lcl|rcu:RCOM_1443770 38 204 + 167 Gaps:18 37.20 492 39.89 1e-28 tyrosyl-tRNA synthetase putative (EC:6.1.1.1)
blastp_kegg lcl|mdm:103428949 39 204 + 166 Gaps:42 36.93 482 44.94 1e-28 probable tyrosine--tRNA ligase mitochondrial
blastp_kegg lcl|mdm:103411042 39 204 + 166 Gaps:42 36.93 482 44.94 1e-28 probable tyrosine--tRNA ligase mitochondrial
blastp_kegg lcl|pxb:103946319 39 204 + 166 Gaps:16 36.63 486 39.33 3e-28 probable tyrosine--tRNA ligase mitochondrial
blastp_pdb 1jil_A 99 189 + 91 Gaps:9 22.86 420 34.38 4e-10 mol:protein length:420 tyrosyl-tRNA synthetase
blastp_pdb 1jik_A 99 189 + 91 Gaps:9 22.86 420 34.38 4e-10 mol:protein length:420 tyrosyl-tRNA synthetase
blastp_pdb 1jij_A 99 189 + 91 Gaps:9 22.86 420 34.38 4e-10 mol:protein length:420 tyrosyl-tRNA synthetase
blastp_pdb 1jii_A 99 189 + 91 Gaps:9 22.86 420 34.38 4e-10 mol:protein length:420 tyrosyl-tRNA synthetase
blastp_pdb 1vbn_B 39 189 + 151 Gaps:18 53.14 318 28.99 5e-10 mol:protein length:318 Tyrosyl-tRNA synthetase
blastp_pdb 1vbn_A 39 189 + 151 Gaps:18 53.14 318 28.99 5e-10 mol:protein length:318 Tyrosyl-tRNA synthetase
blastp_pdb 2yxn_A 39 189 + 151 Gaps:18 52.48 322 28.99 6e-10 mol:protein length:322 Tyrosyl-tRNA synthetase
blastp_pdb 1wq3_A 39 189 + 151 Gaps:18 52.48 322 28.99 6e-10 mol:protein length:322 Tyrosyl-tRNA synthetase
blastp_pdb 1wq4_A 39 189 + 151 Gaps:18 52.65 321 28.99 6e-10 mol:protein length:321 Tyrosyl-tRNA synthetase
blastp_pdb 1vbm_B 39 189 + 151 Gaps:18 53.14 318 28.40 2e-09 mol:protein length:318 Tyrosyl-tRNA synthetase
blastp_uniprot_sprot sp|Q5L661|SYY_CHLAB 39 202 + 164 Gaps:21 42.96 412 32.20 3e-15 Tyrosine--tRNA ligase OS Chlamydophila abortus (strain DSM 27085 / S26/3) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|Q6MC06|SYY_PARUW 39 204 + 166 Gaps:16 42.35 425 28.89 4e-15 Tyrosine--tRNA ligase OS Protochlamydia amoebophila (strain UWE25) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|A5UUZ9|SYY_ROSS1 94 204 + 111 Gaps:9 27.83 424 34.75 2e-14 Tyrosine--tRNA ligase OS Roseiflexus sp. (strain RS-1) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|C1CN46|SYY_STRZP 99 203 + 105 Gaps:11 26.32 418 38.18 6e-14 Tyrosine--tRNA ligase OS Streptococcus pneumoniae (strain P1031) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|C1CH28|SYY_STRZJ 99 203 + 105 Gaps:11 26.32 418 38.18 6e-14 Tyrosine--tRNA ligase OS Streptococcus pneumoniae (strain JJA) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|Q8DN52|SYY_STRR6 99 203 + 105 Gaps:11 26.32 418 38.18 6e-14 Tyrosine--tRNA ligase OS Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|Q97NE3|SYY_STRPN 99 203 + 105 Gaps:11 26.32 418 38.18 6e-14 Tyrosine--tRNA ligase OS Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) GN tyrS PE 1 SV 1
blastp_uniprot_sprot sp|B8ZPM2|SYY_STRPJ 99 203 + 105 Gaps:11 26.32 418 38.18 6e-14 Tyrosine--tRNA ligase OS Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|Q04I74|SYY_STRP2 99 203 + 105 Gaps:11 26.32 418 38.18 6e-14 Tyrosine--tRNA ligase OS Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466) GN tyrS PE 3 SV 1
blastp_uniprot_sprot sp|B5E3A7|SYY_STRP4 99 203 + 105 Gaps:11 26.32 418 38.18 6e-14 Tyrosine--tRNA ligase OS Streptococcus pneumoniae serotype 19F (strain G54) GN tyrS PE 3 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 185 203 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 139 189 51 PTHR11766:SF0 none none none
Pfam 130 189 60 PF00579 "Reactome:REACT_71" tRNA synthetases class I (W and Y) IPR002305
Phobius 204 204 1 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 139 189 51 PTHR11766 "KEGG:00970+6.1.1.1";signature_desc=TYROSYL-TRNA SYNTHETASE none IPR024088
Gene3D 136 189 54 G3DSA:3.40.50.620 none none IPR014729
Phobius 1 184 184 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 130 192 63 SSF52374 none none none

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

0 Targeting