Protein : Qrob_P0658530.2 Q. robur
Protein Identifier  ? Qrob_P0658530.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR12847:SF3 - gb def: y110a2ar.3.p [caenorhabditis elegans] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 192  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006897 endocytosis A vesicle-mediated transport process in which cells take up external materials or membrane constituents by the invagination of a small region of the plasma membrane to form a new membrane-bounded vesicle.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100254924 10 171 + 162 Gaps:2 58.27 278 88.89 5e-98 uncharacterized LOC100254924
blastp_kegg lcl|rcu:RCOM_0260200 13 171 + 159 Gaps:2 56.38 282 89.94 3e-97 Adaptin ear-binding coat-associated protein putative
blastp_kegg lcl|atr:s00067p00080250 1 171 + 171 Gaps:9 54.00 300 88.27 2e-95 AMTR_s00067p00080250 hypothetical protein
blastp_kegg lcl|pmum:103334458 13 171 + 159 Gaps:3 57.97 276 88.12 3e-95 uncharacterized protein At1g03900
blastp_kegg lcl|pper:PRUPE_ppa009822mg 13 171 + 159 Gaps:3 57.97 276 88.12 4e-95 hypothetical protein
blastp_kegg lcl|pop:POPTR_0002s03770g 1 171 + 171 Gaps:10 58.21 280 88.34 8e-95 POPTRDRAFT_643129 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10021562mg 10 171 + 162 Gaps:2 57.65 281 86.42 2e-94 hypothetical protein
blastp_kegg lcl|cit:102608625 10 171 + 162 Gaps:2 57.65 281 86.42 2e-94 uncharacterized LOC102608625
blastp_kegg lcl|pop:POPTR_0005s24810g 1 171 + 171 Gaps:10 56.60 288 88.96 2e-94 POPTRDRAFT_818729 hypothetical protein
blastp_kegg lcl|bdi:100838402 12 171 + 160 Gaps:2 57.14 280 86.25 2e-94 uncharacterized LOC100838402
blastp_pdb 1tqz_A 19 146 + 128 Gaps:6 94.74 133 51.59 9e-36 mol:protein length:133 NECAP1
blastp_uniprot_sprot sp|Q681Q7|Y1390_ARATH 17 171 + 155 Gaps:2 56.99 272 85.81 4e-91 Uncharacterized protein At1g03900 OS Arabidopsis thaliana GN At1g03900 PE 2 SV 1
blastp_uniprot_sprot sp|Q9D1J1|NECP2_MOUSE 14 173 + 160 Gaps:8 60.15 266 46.25 1e-36 Adaptin ear-binding coat-associated protein 2 OS Mus musculus GN Necap2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9NVZ3|NECP2_HUMAN 14 173 + 160 Gaps:8 60.84 263 45.00 1e-36 Adaptin ear-binding coat-associated protein 2 OS Homo sapiens GN NECAP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6P756|NECP2_RAT 14 173 + 160 Gaps:8 60.84 263 45.62 2e-36 Adaptin ear-binding coat-associated protein 2 OS Rattus norvegicus GN Necap2 PE 1 SV 2
blastp_uniprot_sprot sp|Q5E9Q4|NECP2_BOVIN 14 177 + 164 Gaps:8 61.65 266 43.90 4e-36 Adaptin ear-binding coat-associated protein 2 OS Bos taurus GN NECAP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9CR95|NECP1_MOUSE 19 162 + 144 Gaps:8 52.36 275 48.61 4e-35 Adaptin ear-binding coat-associated protein 1 OS Mus musculus GN Necap1 PE 1 SV 2
blastp_uniprot_sprot sp|Q5R630|NECP1_PONAB 19 148 + 130 Gaps:6 46.55 275 51.56 5e-35 Adaptin ear-binding coat-associated protein 1 OS Pongo abelii GN NECAP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q3T093|NECP1_BOVIN 19 148 + 130 Gaps:6 46.55 275 51.56 6e-35 Adaptin ear-binding coat-associated protein 1 OS Bos taurus GN NECAP1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8NC96|NECP1_HUMAN 19 148 + 130 Gaps:6 46.55 275 51.56 6e-35 Adaptin ear-binding coat-associated protein 1 OS Homo sapiens GN NECAP1 PE 1 SV 2
blastp_uniprot_sprot sp|P69682|NECP1_RAT 19 162 + 144 Gaps:8 51.99 277 48.61 1e-34 Adaptin ear-binding coat-associated protein 1 OS Rattus norvegicus GN Necap1 PE 1 SV 1
rpsblast_cdd gnl|CDD|191897 17 171 + 155 Gaps:8 93.04 158 49.66 3e-54 pfam07933 DUF1681 Protein of unknown function (DUF1681). This family is composed of sequences derived from a number of hypothetical eukaryotic proteins of unknown function.
rpsblast_kog gnl|CDD|37711 13 171 + 159 Gaps:6 60.47 253 56.21 5e-60 KOG2500 KOG2500 KOG2500 Uncharacterized conserved protein [Function unknown].

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 14 171 158 PTHR12847:SF3 none none none
Gene3D 22 145 124 G3DSA:2.30.29.30 none none IPR011993
SUPERFAMILY 15 145 131 SSF50729 none none none
PANTHER 14 171 158 PTHR12847 none none none
Pfam 18 171 154 PF07933 none Protein of unknown function (DUF1681) IPR012466

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting