Protein : Qrob_P0658120.2 Q. robur

Protein Identifier  ? Qrob_P0658120.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) K18810 - cyclin D1/2/4, plant Gene Prediction Quality  validated
Protein length 

Sequence

Length: 357  
Kegg Orthology  K18810

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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0051726 regulation of cell cycle Any process that modulates the rate or extent of progression through the cell cycle.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103334251 1 354 + 354 Gaps:1 97.78 361 73.37 0.0 cyclin-D2-1
blastp_kegg lcl|fve:101296900 1 354 + 354 Gaps:6 98.60 357 72.44 1e-175 cyclin-D2-1-like
blastp_kegg lcl|mdm:103419068 1 350 + 350 Gaps:5 98.59 354 69.34 1e-162 cyclin-D4-1-like
blastp_kegg lcl|mdm:103432195 1 354 + 354 Gaps:6 94.37 373 69.32 7e-162 cyclin-D4-1-like
blastp_kegg lcl|rcu:RCOM_0070750 11 354 + 344 Gaps:12 96.72 366 67.23 1e-161 cyclin d putative
blastp_kegg lcl|pper:PRUPE_ppa008565mg 1 324 + 324 none 99.39 326 71.91 2e-159 hypothetical protein
blastp_kegg lcl|tcc:TCM_001004 1 351 + 351 Gaps:8 97.29 369 68.25 5e-158 Cyclin d4 2 putative
blastp_kegg lcl|mdm:103448201 1 350 + 350 Gaps:7 98.59 354 69.63 1e-156 cyclin-D4-1
blastp_kegg lcl|pxb:103933053 1 354 + 354 Gaps:8 99.44 354 69.03 3e-156 cyclin-D4-2
blastp_kegg lcl|cam:101501648 1 344 + 344 Gaps:9 97.99 348 66.86 6e-156 cyclin-D4-1-like
blastp_pdb 3dog_D 84 255 + 172 Gaps:14 62.12 264 32.93 2e-11 mol:protein length:264 Cyclin-A2
blastp_pdb 3dog_B 84 255 + 172 Gaps:14 62.12 264 32.93 2e-11 mol:protein length:264 Cyclin-A2
blastp_pdb 3tnw_D 84 255 + 172 Gaps:14 62.60 262 32.93 2e-11 mol:protein length:262 Cyclin-A2
blastp_pdb 3tnw_B 84 255 + 172 Gaps:14 62.60 262 32.93 2e-11 mol:protein length:262 Cyclin-A2
blastp_pdb 3my5_D 84 255 + 172 Gaps:14 62.60 262 32.93 2e-11 mol:protein length:262 Cyclin-A2
blastp_pdb 3my5_B 84 255 + 172 Gaps:14 62.60 262 32.93 2e-11 mol:protein length:262 Cyclin-A2
blastp_pdb 3bhv_D 84 255 + 172 Gaps:14 62.60 262 32.93 2e-11 mol:protein length:262 Cyclin-A2
blastp_pdb 3bhv_B 84 255 + 172 Gaps:14 62.60 262 32.93 2e-11 mol:protein length:262 Cyclin-A2
blastp_pdb 3bhu_D 84 255 + 172 Gaps:14 62.60 262 32.93 2e-11 mol:protein length:262 Cyclin-A2
blastp_pdb 3bhu_B 84 255 + 172 Gaps:14 62.60 262 32.93 2e-11 mol:protein length:262 Cyclin-A2
blastp_uniprot_sprot sp|Q8LGA1|CCD41_ARATH 67 328 + 262 Gaps:18 83.12 308 59.77 5e-95 Cyclin-D4-1 OS Arabidopsis thaliana GN CYCD4-1 PE 1 SV 2
blastp_uniprot_sprot sp|Q0WQN9|CCD42_ARATH 48 292 + 245 Gaps:10 84.23 298 59.76 5e-93 Cyclin-D4-2 OS Arabidopsis thaliana GN CYCD4-2 PE 1 SV 2
blastp_uniprot_sprot sp|P42752|CCD21_ARATH 69 337 + 269 Gaps:16 76.18 361 57.45 3e-90 Cyclin-D2-1 OS Arabidopsis thaliana GN CYCD2-1 PE 1 SV 3
blastp_uniprot_sprot sp|Q69QB8|CCD31_ORYSJ 1 350 + 350 Gaps:21 99.12 342 45.43 4e-86 Cyclin-D3-1 OS Oryza sativa subsp. japonica GN CYCD3-1 PE 2 SV 2
blastp_uniprot_sprot sp|Q6YXH8|CCD41_ORYSJ 64 335 + 272 Gaps:15 76.12 356 54.61 9e-86 Cyclin-D4-1 OS Oryza sativa subsp. japonica GN CYCD4-1 PE 2 SV 2
blastp_uniprot_sprot sp|Q4KYM5|CCD42_ORYSJ 5 352 + 348 Gaps:22 93.47 383 43.58 1e-78 Cyclin-D4-2 OS Oryza sativa subsp. japonica GN CYCD4-2 PE 2 SV 2
blastp_uniprot_sprot sp|Q8LHA8|CCD22_ORYSJ 64 350 + 287 Gaps:11 82.58 356 47.62 2e-78 Cyclin-D2-2 OS Oryza sativa subsp. japonica GN CYCD2-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q10K98|CCD23_ORYSJ 11 297 + 287 Gaps:21 70.62 405 43.71 9e-57 Putative cyclin-D2-3 OS Oryza sativa subsp. japonica GN CYCD2-3 PE 3 SV 1
blastp_uniprot_sprot sp|P42751|CCD11_ARATH 75 308 + 234 Gaps:5 70.50 339 39.75 2e-51 Cyclin-D1-1 OS Arabidopsis thaliana GN CYCD1-1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9SN11|CCD33_ARATH 102 318 + 217 Gaps:9 59.83 361 43.52 9e-46 Cyclin-D3-3 OS Arabidopsis thaliana GN CYCD3-3 PE 2 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 87 195 109 G3DSA:1.10.472.10 none none IPR013763
SUPERFAMILY 65 201 137 SSF47954 none none IPR013763
PANTHER 7 354 348 PTHR10177:SF166 none none IPR031093
PANTHER 7 354 348 PTHR10177 none none none
ProSitePatterns 102 133 32 PS00292 none Cyclins signature. IPR006671
Gene3D 196 295 100 G3DSA:1.10.472.10 none none IPR013763
Pfam 205 296 92 PF02984 none Cyclin, C-terminal domain IPR004367
SMART 107 195 89 SM00385 none domain present in cyclins, TFIIB and Retinoblastoma IPR013763
SUPERFAMILY 186 296 111 SSF47954 none none IPR013763
Pfam 72 201 130 PF00134 none Cyclin, N-terminal domain IPR006671

0 Localization

0 Qtllist

0 Targeting