Protein : Qrob_P0654520.2 Q. robur
Protein Identifier  ? Qrob_P0654520.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR11638//PTHR11638:SF82 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 819  
Kegg Orthology  K03695
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0019538 protein metabolic process The chemical reactions and pathways involving a specific protein, rather than of proteins in general. Includes protein modification.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103955672 1 817 + 817 Gaps:17 86.98 983 83.86 0.0 chaperone protein ClpB3 chloroplastic-like
blastp_kegg lcl|mdm:103442393 1 817 + 817 Gaps:13 86.98 983 83.86 0.0 chaperone protein ClpB3 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa000855mg 1 818 + 818 Gaps:13 87.05 981 83.96 0.0 hypothetical protein
blastp_kegg lcl|gmx:100801296 1 814 + 814 Gaps:17 84.09 974 87.30 0.0 chaperone protein ClpB3 chloroplastic-like
blastp_kegg lcl|pmum:103330078 1 818 + 818 Gaps:13 87.05 981 83.84 0.0 chaperone protein ClpB3 chloroplastic
blastp_kegg lcl|pxb:103951002 1 815 + 815 Gaps:11 86.78 983 82.65 0.0 chaperone protein ClpB3 chloroplastic-like
blastp_kegg lcl|cit:102616406 8 817 + 810 Gaps:20 86.43 973 85.97 0.0 chaperone protein ClpB3 chloroplastic-like
blastp_kegg lcl|gmx:100785346 5 814 + 810 Gaps:12 83.98 974 87.16 0.0 chaperone protein ClpB3 chloroplastic-like
blastp_kegg lcl|cic:CICLE_v10010991mg 8 817 + 810 Gaps:20 86.43 973 85.61 0.0 hypothetical protein
blastp_kegg lcl|mtr:MTR_7g012820 83 806 + 724 Gaps:8 74.08 1034 89.56 0.0 Chaperone protein clpB
blastp_pdb 1qvr_C 158 779 + 622 Gaps:10 71.66 854 61.76 0.0 mol:protein length:854 ClpB protein
blastp_pdb 1qvr_B 158 779 + 622 Gaps:10 71.66 854 61.76 0.0 mol:protein length:854 ClpB protein
blastp_pdb 1qvr_A 158 779 + 622 Gaps:10 71.66 854 61.76 0.0 mol:protein length:854 ClpB protein
blastp_pdb 3pxi_C 153 784 + 632 Gaps:117 68.21 758 55.71 5e-163 mol:protein length:758 Negative regulator of genetic competence ClpC
blastp_pdb 3pxi_B 153 784 + 632 Gaps:117 68.21 758 55.71 5e-163 mol:protein length:758 Negative regulator of genetic competence ClpC
blastp_pdb 3pxi_A 153 784 + 632 Gaps:117 68.21 758 55.71 5e-163 mol:protein length:758 Negative regulator of genetic competence ClpC
blastp_pdb 1r6b_X 159 793 + 635 Gaps:12 66.75 758 45.45 4e-75 mol:protein length:758 ClpA protein
blastp_pdb 1ksf_X 159 793 + 635 Gaps:12 66.75 758 45.45 4e-75 mol:protein length:758 ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNI
blastp_pdb 3pxg_F 153 471 + 319 Gaps:85 50.43 468 57.20 6e-59 mol:protein length:468 Negative regulator of genetic competence ClpC
blastp_pdb 3pxg_E 153 471 + 319 Gaps:85 50.43 468 57.20 6e-59 mol:protein length:468 Negative regulator of genetic competence ClpC
blastp_uniprot_sprot sp|Q9LF37|CLPB3_ARATH 46 813 + 768 Gaps:9 80.06 968 86.19 0.0 Chaperone protein ClpB3 chloroplastic OS Arabidopsis thaliana GN CLPB3 PE 2 SV 1
blastp_uniprot_sprot sp|Q75GT3|CLPB2_ORYSJ 70 818 + 749 Gaps:3 77.51 978 84.30 0.0 Chaperone protein ClpB2 chloroplastic OS Oryza sativa subsp. japonica GN CLPB2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYJ7|CLPB4_ARATH 69 803 + 735 Gaps:23 78.42 964 70.24 0.0 Chaperone protein ClpB4 mitochondrial OS Arabidopsis thaliana GN CLPB4 PE 2 SV 1
blastp_uniprot_sprot sp|Q0E3C8|CLPB3_ORYSJ 79 809 + 731 Gaps:18 81.38 983 68.25 0.0 Chaperone protein ClpB3 mitochondrial OS Oryza sativa subsp. japonica GN CLPB3 PE 2 SV 3
blastp_uniprot_sprot sp|Q8YM56|CLPB2_NOSS1 90 790 + 701 Gaps:5 80.05 872 70.06 0.0 Chaperone protein ClpB 2 OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN clpB2 PE 3 SV 2
blastp_uniprot_sprot sp|Q8DJ40|CLPB1_THEEB 90 779 + 690 Gaps:16 80.94 871 71.63 0.0 Chaperone protein ClpB 1 OS Thermosynechococcus elongatus (strain BP-1) GN clpB1 PE 3 SV 1
blastp_uniprot_sprot sp|Q7NFE9|CLPB_GLOVI 90 799 + 710 Gaps:14 80.05 872 70.06 0.0 Chaperone protein ClpB OS Gloeobacter violaceus (strain PCC 7421) GN clpB PE 3 SV 1
blastp_uniprot_sprot sp|P53533|CLPB1_SYNE7 90 801 + 712 Gaps:15 79.98 874 68.81 0.0 Chaperone protein ClpB 1 OS Synechococcus elongatus (strain PCC 7942) GN clpB1 PE 2 SV 3
blastp_uniprot_sprot sp|O87444|CLPB_LEPBY 89 802 + 714 Gaps:29 84.08 873 68.26 0.0 Chaperone protein ClpB OS Leptolyngbya boryana GN clpB PE 2 SV 2
blastp_uniprot_sprot sp|P74361|CLPB2_SYNY3 90 778 + 689 Gaps:5 79.01 872 68.51 0.0 Chaperone protein ClpB 2 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN clpB2 PE 3 SV 1

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 104 153 50 PF02861 none Clp amino terminal domain IPR004176
ProSitePatterns 216 228 13 PS00870 none Chaperonins clpA/B signature 1. IPR018368
Gene3D 476 707 232 G3DSA:3.40.50.300 none none IPR027417
PANTHER 450 807 358 PTHR11638 none none none
SMART 697 791 95 SM01086 none C-terminal, D2-small domain, of ClpB protein IPR019489
ProSitePatterns 557 575 19 PS00871 none Chaperonins clpA/B signature 2. IPR028299
SUPERFAMILY 472 778 307 SSF52540 none none IPR027417
PANTHER 85 433 349 PTHR11638 none none none
Gene3D 157 264 108 G3DSA:3.40.50.300 none none IPR027417
Gene3D 265 348 84 G3DSA:1.10.8.60 none none none
Gene3D 89 156 68 G3DSA:1.10.1780.10 none none IPR023150
Coils 356 384 29 Coil none none none
Pfam 522 690 169 PF07724 none AAA domain (Cdc48 subfamily) IPR003959
PANTHER 450 807 358 PTHR11638:SF82 none none none
SUPERFAMILY 150 471 322 SSF52540 none none IPR027417
Pfam 158 257 100 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
SMART 33 264 232 SM00382 none ATPases associated with a variety of cellular activities IPR003593
SMART 523 690 168 SM00382 none ATPases associated with a variety of cellular activities IPR003593
Gene3D 708 781 74 G3DSA:1.10.8.60 none none none
PRINTS 527 545 19 PR00300 none ATP-dependent Clp protease ATP-binding subunit signature IPR001270
PRINTS 601 619 19 PR00300 none ATP-dependent Clp protease ATP-binding subunit signature IPR001270
PRINTS 572 590 19 PR00300 none ATP-dependent Clp protease ATP-binding subunit signature IPR001270
PRINTS 634 648 15 PR00300 none ATP-dependent Clp protease ATP-binding subunit signature IPR001270
PANTHER 85 433 349 PTHR11638:SF82 none none none
Coils 428 449 22 Coil none none none
Coils 387 422 36 Coil none none none
Pfam 697 776 80 PF10431 none C-terminal, D2-small domain, of ClpB protein IPR019489
SUPERFAMILY 90 163 74 SSF81923 none none none

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting