Protein : Qrob_P0651670.2 Q. robur
Protein Identifier  ? Qrob_P0651670.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=35) PF14368 - Probable lipid transfer Gene Prediction Quality  validated
Protein length 

Sequence

Length: 131  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008289 lipid binding Interacting selectively and non-covalently with a lipid.
GO:0006869 lipid transport The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103322077 7 114 + 108 Gaps:1 57.98 188 61.47 1e-40 non-specific lipid transfer protein GPI-anchored 1
blastp_kegg lcl|pper:PRUPE_ppa012022mg 7 114 + 108 Gaps:1 58.29 187 61.47 1e-39 hypothetical protein
blastp_kegg lcl|mdm:103431927 8 116 + 109 Gaps:3 94.92 118 58.04 1e-39 non-specific lipid transfer protein GPI-anchored 1-like
blastp_kegg lcl|mdm:103452166 8 114 + 107 Gaps:3 60.11 183 60.00 5e-39 non-specific lipid transfer protein GPI-anchored 1
blastp_kegg lcl|mdm:103403172 8 114 + 107 Gaps:3 58.82 187 58.18 4e-38 non-specific lipid transfer protein GPI-anchored 1-like
blastp_kegg lcl|pxb:103961453 8 114 + 107 Gaps:3 59.14 186 55.45 1e-36 non-specific lipid transfer protein GPI-anchored 1
blastp_kegg lcl|vvi:100259092 7 114 + 108 Gaps:1 54.23 201 53.21 2e-35 uncharacterized LOC100259092
blastp_kegg lcl|rcu:RCOM_1079910 12 114 + 103 Gaps:5 58.70 184 58.33 3e-35 lipid binding protein putative
blastp_kegg lcl|pop:POPTR_0003s17090g 19 114 + 96 none 50.26 191 62.50 4e-35 POPTRDRAFT_817545 GPI-anchored protein precursor
blastp_kegg lcl|fve:101311244 7 115 + 109 Gaps:2 56.92 195 54.05 2e-34 uncharacterized GPI-anchored protein At1g27950-like
blastp_uniprot_sprot sp|Q9C7F7|UGPI5_ARATH 30 114 + 85 none 44.04 193 50.59 5e-28 Uncharacterized GPI-anchored protein At1g27950 OS Arabidopsis thaliana GN At1g27950 PE 1 SV 1
blastp_uniprot_sprot sp|O64864|YLS3_ARATH 1 115 + 115 Gaps:12 56.10 205 32.17 3e-12 Protein YLS3 OS Arabidopsis thaliana GN YLS3 PE 2 SV 1
rpsblast_cdd gnl|CDD|72935 42 105 + 64 Gaps:4 95.24 63 41.67 3e-07 cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI) Lipid Transfer (LT) and Seed Storage (SS) Protein family a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors lipid transfer proteins seed storage proteins and similar proteins. Proteins in this family are known to play important roles in defending plants from insects and pathogens lipid transport between intracellular membranes and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges..

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 22 25 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 31 113 83 G3DSA:1.10.110.10 none none none
SUPERFAMILY 30 113 84 SSF47699 none none IPR016140
Phobius 10 21 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 26 130 105 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 23 113 91 PF14368 none Probable lipid transfer IPR016140
SMART 32 113 82 SM00499 none Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family IPR016140
PRINTS 52 66 15 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 90 107 18 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 31 47 17 PR00382 none Plant phospholipid transfer protein signature IPR000528

4 Localization

Analysis Start End Length
TMHMM 10 29 19
SignalP_GRAM_NEGATIVE 1 26 25
SignalP_EUK 1 25 24
SignalP_GRAM_POSITIVE 1 28 27

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5

0 Targeting