Protein : Qrob_P0645130.2 Q. robur
Protein Identifier  ? Qrob_P0645130.2 Organism . Name  Quercus robur
Score  93.2 Score Type  egn
Protein Description  (M=1) PTHR30188 - ABC TRANSPORTER PERMEASE PROTEIN-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 322  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0043190 ATP-binding cassette (ABC) transporter complex A complex for the transport of metabolites into and out of the cell, typically comprised of four domains; two membrane-associated domains and two ATP-binding domains at the intracellular face of the membrane, that form a central pore through the plasma membrane. Each of the four core domains may be encoded as a separate polypeptide or the domains can be fused in any one of a number of ways into multidomain polypeptides. In Bacteria and Archaebacteria, ABC transporters also include substrate binding proteins to bind substrate external to the cytoplasm and deliver it to the transporter.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10020911mg 12 321 + 310 none 88.57 350 85.81 0.0 hypothetical protein
blastp_kegg lcl|cit:102613457 12 321 + 310 none 88.57 350 85.81 0.0 protein TRIGALACTOSYLDIACYLGLYCEROL 1 chloroplastic-like
blastp_kegg lcl|pop:POPTR_0002s23540g 6 321 + 316 Gaps:2 90.34 352 83.96 0.0 POPTRDRAFT_411553 hypothetical protein
blastp_kegg lcl|pmum:103325837 12 319 + 308 Gaps:1 87.22 352 84.36 0.0 protein TRIGALACTOSYLDIACYLGLYCEROL 1 chloroplastic
blastp_kegg lcl|gmx:100782794 2 321 + 320 none 89.89 356 80.00 0.0 protein TRIGALACTOSYLDIACYLGLYCEROL 1 chloroplastic-like
blastp_kegg lcl|pvu:PHAVU_007G123100g 12 321 + 310 none 87.08 356 81.61 0.0 hypothetical protein
blastp_kegg lcl|gmx:100793521 2 321 + 320 none 89.89 356 79.38 0.0 protein TRIGALACTOSYLDIACYLGLYCEROL 1 chloroplastic-like
blastp_kegg lcl|vvi:100241159 9 321 + 313 none 65.48 478 83.39 0.0 protein TRIGALACTOSYLDIACYLGLYCEROL 1 chloroplastic-like
blastp_kegg lcl|mtr:MTR_3g005100 2 321 + 320 none 90.14 355 79.38 0.0 Protein TRIGALACTOSYLDIACYLGLYCEROL
blastp_kegg lcl|sly:101267651 17 321 + 305 Gaps:7 86.43 361 82.69 0.0 protein TRIGALACTOSYLDIACYLGLYCEROL 1 chloroplastic-like
blastp_uniprot_sprot sp|Q8L4R0|TGD1_ARATH 6 321 + 316 Gaps:1 90.57 350 77.60 3e-178 Protein TRIGALACTOSYLDIACYLGLYCEROL 1 chloroplastic OS Arabidopsis thaliana GN TGD1 PE 1 SV 1
blastp_uniprot_sprot sp|P73009|Y1045_SYNY3 62 316 + 255 none 96.96 263 49.80 3e-85 Probable ABC transporter permease protein slr1045 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN slr1045 PE 3 SV 1
blastp_uniprot_sprot sp|P51393|YCF63_PORPU 63 317 + 255 Gaps:5 95.06 263 45.60 2e-66 Probable ABC transporter permease protein ycf63 OS Porphyra purpurea GN ycf63 PE 3 SV 1
blastp_uniprot_sprot sp|Q1XD94|YCF63_PYRYE 82 317 + 236 none 89.73 263 44.07 2e-63 Probable ABC transporter permease protein ycf63 OS Pyropia yezoensis GN ycf63 PE 3 SV 1
blastp_uniprot_sprot sp|Q9ZE51|Y096_RICPR 88 311 + 224 Gaps:4 86.49 259 40.18 9e-43 Probable ABC transporter permease protein RP096 OS Rickettsia prowazekii (strain Madrid E) GN RP096 PE 3 SV 1
blastp_uniprot_sprot sp|Q4UNC7|Y080_RICFE 88 311 + 224 Gaps:4 86.49 259 39.73 2e-41 Probable ABC transporter permease protein RF_0080 OS Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN RF_0080 PE 3 SV 1
blastp_uniprot_sprot sp|Q68XW4|Y041_RICTY 88 311 + 224 Gaps:4 86.49 259 38.84 2e-41 Probable ABC transporter permease protein RT0041 OS Rickettsia typhi (strain ATCC VR-144 / Wilmington) GN RT0041 PE 3 SV 1
blastp_uniprot_sprot sp|Q1RGU3|Y1340_RICBR 84 311 + 228 Gaps:4 88.03 259 39.04 4e-41 Probable ABC transporter permease protein RBE_1340 OS Rickettsia bellii (strain RML369-C) GN RBE_1340 PE 3 SV 1
blastp_uniprot_sprot sp|Q92JD8|Y129_RICCN 88 311 + 224 Gaps:4 86.49 259 39.29 2e-40 Probable ABC transporter permease protein RC0129 OS Rickettsia conorii (strain ATCC VR-613 / Malish 7) GN RC0129 PE 3 SV 1
blastp_uniprot_sprot sp|P64609|MLAE_SHIFL 80 310 + 231 Gaps:7 90.77 260 31.36 2e-28 Probable phospholipid ABC transporter permease protein MlaE OS Shigella flexneri GN mlaE PE 3 SV 1
rpsblast_cdd gnl|CDD|178648 24 312 + 289 Gaps:1 99.32 292 78.62 1e-139 PLN03100 PLN03100 Permease subunit of ER-derived-lipid transporter Provisional.
rpsblast_cdd gnl|CDD|145511 95 309 + 215 none 100.00 215 43.72 2e-65 pfam02405 Permease Permease. This domain functions as a permease. In a hypothetical protein from Neisseria it is involved in L-glutamate import into the cell. In Arabidopsis ABC transporter I family member 14 it is involved in lipid transfer within the cell.
rpsblast_cdd gnl|CDD|129166 79 310 + 232 Gaps:3 90.73 259 43.40 1e-58 TIGR00056 TIGR00056 conserved hypothetical integral membrane protein. This model describes a subfamily of the DUF140 family a set of proteins found so far in Bacteria and chloroplast. Members have multiple predicted transmembrane helical regions. One member of this family has been associated with the toluene tolerance phenotype of Pseudomonas putida. Many bacterial species have one or two members. The Mycobacteria have large paralogous families included in the DUF140 family but excluded from this subfamily on based on extreme divergence at the amino end and on phylogenetic and UPGMA trees on the more conserved regions.
rpsblast_cdd gnl|CDD|31110 79 314 + 236 none 88.39 267 36.86 5e-53 COG0767 Ttg2B ABC-type transport system involved in resistance to organic solvents permease component [Secondary metabolites biosynthesis transport and catabolism].

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 279 289 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 109 128 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 89 108 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 16 316 301 PTHR30188:SF2 none none none
Phobius 290 310 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 311 321 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 206 239 34 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 69 88 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 240 259 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 16 316 301 PTHR30188 none none IPR030802
TIGRFAM 78 312 235 TIGR00056 none TIGR00056: ABC transport permease subunit IPR003453
Pfam 95 309 215 PF02405 none Permease IPR030802
Phobius 260 278 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 129 205 77 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 68 68 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

4 Localization

Analysis Start End Length
TMHMM 109 128 19
TMHMM 217 239 22
TMHMM 260 278 18
TMHMM 288 310 22

0 Qtllist

0 Targeting