Protein : Qrob_P0641120.2 Q. robur
Protein Identifier  ? Qrob_P0641120.2 Organism . Name  Quercus robur
Score  95.0 Score Type  egn
Protein Description  (M=1) K05757 - actin related protein 2/3 complex, subunit 1A/1B Gene Prediction Quality  validated
Protein length 

Sequence

Length: 293  
Kegg Orthology  K05757
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005885 Arp2/3 protein complex A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments.
GO:0015629 actin cytoskeleton The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
GO:0034314 Arp2/3 complex-mediated actin nucleation The actin nucleation process in which actin monomers combine to form a new branch on the side of an existing actin filament; mediated by the Arp2/3 protein complex and its interaction with other proteins.
GO:0030833 regulation of actin filament polymerization Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s13810g 9 262 + 254 none 67.20 378 90.94 1e-170 POPTRDRAFT_824237 putative ARP2/3 protein complex subunit p41
blastp_kegg lcl|cmo:103491371 9 262 + 254 Gaps:1 67.11 377 91.70 5e-170 actin-related protein 2/3 complex subunit 1A-like
blastp_kegg lcl|pmum:103328750 9 262 + 254 none 67.20 378 89.76 1e-169 actin-related protein 2/3 complex subunit 1B
blastp_kegg lcl|pper:PRUPE_ppa007200mg 9 262 + 254 none 67.20 378 89.76 1e-169 hypothetical protein
blastp_kegg lcl|vvi:100257410 9 262 + 254 none 67.20 378 90.16 4e-169 actin-related protein 2/3 complex subunit 1-like
blastp_kegg lcl|cam:101509733 9 262 + 254 none 67.55 376 88.98 4e-168 actin-related protein 2/3 complex subunit 1-like
blastp_kegg lcl|rcu:RCOM_0540370 9 262 + 254 none 65.80 386 89.37 5e-168 WD-repeat protein putative
blastp_kegg lcl|cit:102629918 9 262 + 254 none 67.02 379 88.98 2e-167 actin-related protein 2/3 complex subunit 1A-like
blastp_kegg lcl|mdm:103405201 9 262 + 254 none 67.20 378 88.98 2e-167 actin-related protein 2/3 complex subunit 1B-like
blastp_kegg lcl|fve:101300077 9 262 + 254 none 67.20 378 89.37 2e-167 actin-related protein 2/3 complex subunit 1-like
blastp_pdb 3rse_C 10 236 + 227 Gaps:1 60.75 372 49.12 2e-70 mol:protein length:372 Actin-related protein 2/3 complex subunit 1B
blastp_pdb 3dxm_C 10 236 + 227 Gaps:1 60.75 372 49.12 2e-70 mol:protein length:372 Actin-related protein 2/3 complex subunit 1B
blastp_pdb 3dxk_C 10 236 + 227 Gaps:1 60.75 372 49.12 2e-70 mol:protein length:372 Actin-related protein 2/3 complex subunit 1B
blastp_pdb 2p9u_C 10 236 + 227 Gaps:1 60.75 372 48.67 3e-70 mol:protein length:372 Actin-related protein 2/3 complex subunit 1B
blastp_pdb 2p9s_C 10 236 + 227 Gaps:1 60.75 372 48.67 3e-70 mol:protein length:372 Actin-related protein 2/3 complex subunit 1B
blastp_pdb 2p9p_C 10 236 + 227 Gaps:1 60.75 372 48.67 3e-70 mol:protein length:372 Actin-related protein 2/3 complex subunit 1B
blastp_pdb 2p9n_C 10 236 + 227 Gaps:1 60.75 372 48.67 3e-70 mol:protein length:372 Actin-related protein 2/3 complex subunit 1B
blastp_pdb 2p9l_C 10 236 + 227 Gaps:1 60.75 372 48.67 3e-70 mol:protein length:372 Actin-related protein 2/3 complex subunit 1B
blastp_pdb 2p9k_C 10 236 + 227 Gaps:1 60.75 372 48.67 3e-70 mol:protein length:372 Actin-related protein 2/3 complex subunit 1B
blastp_pdb 2p9i_C 10 236 + 227 Gaps:1 60.75 372 48.67 3e-70 mol:protein length:372 Actin-related protein 2/3 complex subunit 1B
blastp_uniprot_sprot sp|Q9SJW6|ARC1B_ARATH 9 252 + 244 none 64.55 378 85.25 5e-159 Actin-related protein 2/3 complex subunit 1B OS Arabidopsis thaliana GN ARPC1B PE 2 SV 1
blastp_uniprot_sprot sp|O80856|ARC1A_ARATH 9 252 + 244 none 64.55 378 84.84 1e-158 Actin-related protein 2/3 complex subunit 1A OS Arabidopsis thaliana GN ARPC1A PE 2 SV 1
blastp_uniprot_sprot sp|O96622|ARPC1_DICDI 9 263 + 255 Gaps:7 67.21 369 47.98 2e-79 Actin-related protein 2/3 complex subunit 1 OS Dictyostelium discoideum GN arcA PE 1 SV 1
blastp_uniprot_sprot sp|Q9WV32|ARC1B_MOUSE 10 240 + 231 Gaps:1 61.83 372 50.00 3e-73 Actin-related protein 2/3 complex subunit 1B OS Mus musculus GN Arpc1b PE 2 SV 4
blastp_uniprot_sprot sp|O88656|ARC1B_RAT 10 243 + 234 Gaps:2 62.90 372 49.57 3e-72 Actin-related protein 2/3 complex subunit 1B OS Rattus norvegicus GN Arpc1b PE 2 SV 3
blastp_uniprot_sprot sp|O15143|ARC1B_HUMAN 10 243 + 234 Gaps:2 62.90 372 49.15 1e-71 Actin-related protein 2/3 complex subunit 1B OS Homo sapiens GN ARPC1B PE 1 SV 3
blastp_uniprot_sprot sp|Q9R0Q6|ARC1A_MOUSE 10 247 + 238 Gaps:3 64.59 370 49.37 1e-70 Actin-related protein 2/3 complex subunit 1A OS Mus musculus GN Arpc1a PE 1 SV 1
blastp_uniprot_sprot sp|Q92747|ARC1A_HUMAN 10 247 + 238 Gaps:3 64.59 370 49.37 1e-70 Actin-related protein 2/3 complex subunit 1A OS Homo sapiens GN ARPC1A PE 1 SV 2
blastp_uniprot_sprot sp|Q1JP79|ARC1A_BOVIN 10 247 + 238 Gaps:3 64.59 370 49.37 1e-70 Actin-related protein 2/3 complex subunit 1A OS Bos taurus GN ARPC1A PE 2 SV 1
blastp_uniprot_sprot sp|Q99PD4|ARC1A_RAT 10 247 + 238 Gaps:3 64.59 370 49.37 2e-70 Actin-related protein 2/3 complex subunit 1A OS Rattus norvegicus GN Arpc1a PE 2 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 100 132 33 PS50082 none Trp-Asp (WD) repeats profile. IPR001680
Pfam 9 42 34 PF00400 none WD domain, G-beta repeat IPR001680
Pfam 97 132 36 PF00400 none WD domain, G-beta repeat IPR001680
ProSiteProfiles 10 51 42 PS50082 none Trp-Asp (WD) repeats profile. IPR001680
ProSitePatterns 29 43 15 PS00678 none Trp-Asp (WD) repeats signature. IPR019775
Gene3D 7 236 230 G3DSA:2.130.10.10 none none IPR015943
PANTHER 9 251 243 PTHR10709 none none IPR017383
SUPERFAMILY 7 238 232 SSF50978 none none IPR017986
SMART 47 86 40 SM00320 none WD40 repeats IPR001680
SMART 153 192 40 SM00320 none WD40 repeats IPR001680
SMART 3 42 40 SM00320 none WD40 repeats IPR001680
SMART 92 132 41 SM00320 none WD40 repeats IPR001680
ProSiteProfiles 10 141 132 PS50294 none Trp-Asp (WD) repeats circular profile. IPR017986

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting