Protein : Qrob_P0640860.2 Q. robur
Protein Identifier  ? Qrob_P0640860.2 Organism . Name  Quercus robur
Score  99.6 Score Type  egn
Protein Description  (M=35) PF14368 - Probable lipid transfer Gene Prediction Quality  validated
Protein length 

Sequence

Length: 119  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0008289 lipid binding Interacting selectively and non-covalently with a lipid.
GO:0006869 lipid transport The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_042285 1 118 + 118 Gaps:1 98.32 119 60.68 8e-45 Non-specific lipid-transfer protein putative
blastp_kegg lcl|vvi:100250042 1 118 + 118 Gaps:1 98.32 119 53.85 2e-38 non-specific lipid-transfer protein-like
blastp_kegg lcl|mdm:103447266 1 117 + 117 Gaps:7 97.39 115 56.25 2e-36 non-specific lipid-transfer protein 1-like
blastp_kegg lcl|mdm:103422644 1 117 + 117 Gaps:7 97.39 115 56.25 2e-36 non-specific lipid-transfer protein 1-like
blastp_kegg lcl|pper:PRUPE_ppa013519mg 15 118 + 104 Gaps:2 89.83 118 59.43 3e-36 hypothetical protein
blastp_kegg lcl|pxb:103963303 1 117 + 117 Gaps:7 97.39 115 56.25 6e-35 non-specific lipid-transfer protein 1-like
blastp_kegg lcl|pmum:103340073 15 118 + 104 Gaps:2 88.33 120 56.60 3e-34 non-specific lipid-transfer protein 1-like
blastp_kegg lcl|pper:PRUPE_ppa023836mg 1 118 + 118 Gaps:2 100.00 118 51.69 4e-34 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_006G078300g 4 117 + 114 none 97.44 117 48.25 5e-34 hypothetical protein
blastp_kegg lcl|fve:101295787 1 118 + 118 Gaps:3 98.32 119 52.14 5e-34 non-specific lipid-transfer protein 1-like
blastp_pdb 2b5s_B 30 117 + 88 none 95.65 92 43.18 3e-21 mol:protein length:92 Non-specific lipid transfer protein
blastp_pdb 2b5s_A 30 117 + 88 none 95.65 92 43.18 3e-21 mol:protein length:92 Non-specific lipid transfer protein
blastp_pdb 2alg_B 30 117 + 88 none 95.65 92 43.18 3e-21 mol:protein length:92 non-specific lipid transfer protein
blastp_pdb 2alg_A 30 117 + 88 none 95.65 92 43.18 3e-21 mol:protein length:92 non-specific lipid transfer protein
blastp_pdb 1mzm_A 29 118 + 90 Gaps:1 97.85 93 39.56 2e-19 mol:protein length:93 MAIZE NONSPECIFIC LIPID TRANSFER PROTEIN
blastp_pdb 1mzl_A 29 118 + 90 Gaps:1 97.85 93 39.56 2e-19 mol:protein length:93 MAIZE NONSPECIFIC LIPID TRANSFER PROTEIN
blastp_pdb 1fk7_A 29 118 + 90 Gaps:1 97.85 93 39.56 2e-19 mol:protein length:93 NON-SPECIFIC LIPID TRANSFER PROTEIN
blastp_pdb 1fk6_A 29 118 + 90 Gaps:1 97.85 93 39.56 2e-19 mol:protein length:93 NON-SPECIFIC LIPID TRANSFER PROTEIN
blastp_pdb 1fk5_A 29 118 + 90 Gaps:1 97.85 93 39.56 2e-19 mol:protein length:93 NONSPECIFIC LIPID-TRANSFER PROTEIN
blastp_pdb 1fk4_A 29 118 + 90 Gaps:1 97.85 93 39.56 2e-19 mol:protein length:93 NONSPECIFIC LIPID-TRANSFER PROTEIN
blastp_uniprot_sprot sp|Q39950|NLTP_HELAN 1 118 + 118 Gaps:4 98.28 116 47.37 1e-28 Non-specific lipid-transfer protein OS Helianthus annuus PE 3 SV 1
blastp_uniprot_sprot sp|Q43129|NLTP2_GOSHI 7 117 + 111 Gaps:4 95.83 120 46.09 2e-25 Non-specific lipid-transfer protein OS Gossypium hirsutum PE 2 SV 1
blastp_uniprot_sprot sp|Q42762|NLTP1_GOSHI 8 117 + 110 Gaps:2 96.55 116 44.64 3e-25 Non-specific lipid-transfer protein OS Gossypium hirsutum PE 3 SV 1
blastp_uniprot_sprot sp|Q9M5X8|NLTP_PRUAV 4 117 + 114 none 97.44 117 40.35 1e-24 Non-specific lipid-transfer protein OS Prunus avium PE 1 SV 1
blastp_uniprot_sprot sp|Q43017|NLTP1_PRUDU 4 118 + 115 none 98.29 117 39.13 3e-24 Non-specific lipid-transfer protein 1 OS Prunus dulcis PE 3 SV 1
blastp_uniprot_sprot sp|Q39794|NLTP_GERHY 16 118 + 103 Gaps:1 87.93 116 46.08 4e-24 Non-specific lipid-transfer protein OS Gerbera hybrida PE 3 SV 1
blastp_uniprot_sprot sp|P85894|LTP1_MORNI 30 116 + 87 none 95.60 91 45.98 2e-23 Non-specific lipid-transfer protein 1 OS Morus nigra PE 1 SV 1
blastp_uniprot_sprot sp|Q9M5X7|NLTP_MALDO 1 117 + 117 Gaps:5 97.39 115 42.86 4e-23 Non-specific lipid-transfer protein OS Malus domestica GN MALD3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9M5X6|NLTP_PYRCO 1 117 + 117 Gaps:5 97.39 115 42.86 1e-22 Non-specific lipid-transfer protein OS Pyrus communis PE 1 SV 1
blastp_uniprot_sprot sp|Q43766|NLTP3_HORVU 1 118 + 118 Gaps:4 98.31 118 43.10 3e-22 Non-specific lipid-transfer protein 3 OS Hordeum vulgare GN LTP3 PE 3 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 32 116 85 SM00499 none Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family IPR016140
Phobius 22 28 7 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PRINTS 72 87 16 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 51 65 15 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 107 118 12 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 31 47 17 PR00382 none Plant phospholipid transfer protein signature IPR000528
PRINTS 89 106 18 PR00382 none Plant phospholipid transfer protein signature IPR000528
Phobius 29 118 90 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 31 118 88 SSF47699 none none IPR016140
Phobius 1 28 28 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 15 106 92 PF14368 none Probable lipid transfer IPR016140
Phobius 10 21 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 30 118 89 G3DSA:1.10.110.10 none none none

4 Localization

Analysis Start End Length
SignalP_EUK 1 28 27
SignalP_GRAM_POSITIVE 1 28 27
SignalP_GRAM_NEGATIVE 1 28 27
TMHMM 4 26 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting