Protein : Qrob_P0636480.2 Q. robur
Protein Identifier  ? Qrob_P0636480.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K03262 - translation initiation factor eIF-5 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 444  
Kegg Orthology  K03262
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0003743 translation initiation factor activity Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
GO:0006413 translational initiation The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103956993 1 443 + 443 Gaps:7 100.00 442 76.92 0.0 probable eukaryotic translation initiation factor 5-1
blastp_kegg lcl|tcc:TCM_035003 1 443 + 443 Gaps:13 100.00 442 80.54 0.0 Translation initiation factor IF2/IF5 isoform 1
blastp_kegg lcl|vvi:100262554 1 436 + 436 Gaps:7 98.44 450 75.62 0.0 eukaryotic translation initiation factor 5-like
blastp_kegg lcl|cmo:103488416 1 443 + 443 Gaps:7 100.00 444 76.58 0.0 eukaryotic translation initiation factor 5-like
blastp_kegg lcl|mdm:103441616 1 443 + 443 Gaps:7 100.00 442 76.92 0.0 probable eukaryotic translation initiation factor 5-1
blastp_kegg lcl|csv:101210873 1 443 + 443 Gaps:7 100.00 444 76.13 0.0 eukaryotic translation initiation factor 5-like
blastp_kegg lcl|pxb:103936138 1 443 + 443 Gaps:6 100.00 443 76.75 0.0 probable eukaryotic translation initiation factor 5-1
blastp_kegg lcl|pxb:103936135 1 443 + 443 Gaps:6 100.00 443 76.75 0.0 probable eukaryotic translation initiation factor 5-1
blastp_kegg lcl|pxb:103956716 1 443 + 443 Gaps:6 100.00 443 76.75 0.0 probable eukaryotic translation initiation factor 5-1
blastp_kegg lcl|mdm:103401870 1 443 + 443 Gaps:6 100.00 443 76.75 0.0 probable eukaryotic translation initiation factor 5-1
blastp_pdb 2e9h_A 13 149 + 137 Gaps:1 87.90 157 58.70 2e-51 mol:protein length:157 Eukaryotic translation initiation factor 5
blastp_pdb 2g2k_A 13 149 + 137 Gaps:1 81.18 170 58.70 3e-51 mol:protein length:170 Eukaryotic translation initiation factor 5
blastp_pdb 1nee_A 17 128 + 112 Gaps:7 76.09 138 33.33 5e-10 mol:protein length:138 Probable translation initiation factor 2 beta
blastp_pdb 2dcu_B 17 128 + 112 Gaps:7 70.95 148 33.33 2e-07 mol:protein length:148 Translation initiation factor 2 beta subunit
blastp_pdb 2d74_B 17 128 + 112 Gaps:7 70.95 148 33.33 2e-07 mol:protein length:148 Translation initiation factor 2 beta subunit
blastp_pdb 2iu1_A 351 436 + 86 Gaps:5 42.79 208 29.21 2e-06 mol:protein length:208 EUKARYOTIC TRANSLATION INITIATION FACTOR 5
blastp_uniprot_sprot sp|Q9C8F1|IF5Y_ARATH 1 443 + 443 Gaps:24 100.00 439 71.07 0.0 Probable eukaryotic translation initiation factor 5-1 OS Arabidopsis thaliana GN At1g36730 PE 2 SV 1
blastp_uniprot_sprot sp|P48724|IF5_PHAVU 1 443 + 443 Gaps:18 100.00 443 69.75 0.0 Eukaryotic translation initiation factor 5 OS Phaseolus vulgaris GN EIF5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9S825|IF5Z_ARATH 1 436 + 436 Gaps:25 98.17 437 69.00 0.0 Probable eukaryotic translation initiation factor 5-2 OS Arabidopsis thaliana GN At1g77840 PE 2 SV 1
blastp_uniprot_sprot sp|P55876|IF5_MAIZE 1 441 + 441 Gaps:14 99.11 451 67.34 0.0 Eukaryotic translation initiation factor 5 OS Zea mays GN EIF5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9VXK6|IF5_DROME 13 436 + 424 Gaps:39 85.56 464 35.01 5e-59 Eukaryotic translation initiation factor 5 OS Drosophila melanogaster GN eIF5 PE 1 SV 1
blastp_uniprot_sprot sp|P55010|IF5_HUMAN 13 148 + 136 Gaps:1 31.79 431 59.12 5e-49 Eukaryotic translation initiation factor 5 OS Homo sapiens GN EIF5 PE 1 SV 2
blastp_uniprot_sprot sp|Q07205|IF5_RAT 13 148 + 136 Gaps:1 31.93 429 59.12 7e-49 Eukaryotic translation initiation factor 5 OS Rattus norvegicus GN Eif5 PE 1 SV 1
blastp_uniprot_sprot sp|P59325|IF5_MOUSE 13 148 + 136 Gaps:1 31.93 429 59.12 7e-49 Eukaryotic translation initiation factor 5 OS Mus musculus GN Eif5 PE 1 SV 1
blastp_uniprot_sprot sp|Q5R4L0|IF5_PONAB 13 148 + 136 Gaps:1 31.79 431 59.12 8e-49 Eukaryotic translation initiation factor 5 OS Pongo abelii GN EIF5 PE 2 SV 1
blastp_uniprot_sprot sp|Q22918|IF5_CAEEL 13 434 + 422 Gaps:14 55.73 436 46.91 2e-48 Eukaryotic translation initiation factor 5 OS Caenorhabditis elegans GN C37C3.2 PE 3 SV 2
rpsblast_cdd gnl|CDD|128901 15 129 + 115 Gaps:5 100.00 110 46.36 1e-40 smart00653 eIF2B_5 domain present in translation initiation factor eIF2B and eIF5.
rpsblast_cdd gnl|CDD|145177 1 131 + 131 Gaps:8 100.00 125 44.00 4e-40 pfam01873 eIF-5_eIF-2B Domain found in IF2B/IF5. This family includes the N terminus of eIF-5 and the C terminus of eIF-2 beta. This region corresponds to the whole of the archaebacterial eIF-2 beta homologue. The region contains a putative zinc binding C4 finger.
rpsblast_cdd gnl|CDD|211399 293 441 + 149 Gaps:8 98.73 157 36.13 1e-34 cd11561 W2_eIF5 C-terminal W2 domain of eukaryotic translation initiation factor 5. eIF5 functions as a GTPase acceleration protein (GAP) as well as a GDP dissociation inhibitor (GDI) during translational initiation in eukaryotes. The structure of this C-terminal domain resembles that of a set of concatenated HEAT repeats.
rpsblast_cdd gnl|CDD|197767 352 436 + 85 Gaps:2 100.00 83 37.35 1e-15 smart00515 eIF5C Domain at the C-termini of GCD6 eIF-2B epsilon eIF-4 gamma and eIF-5.

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 30 72 43 G3DSA:3.30.30.50 none none IPR016189
SMART 15 129 115 SM00653 none domain present in translation initiation factor eIF2B and eIF5 IPR002735
Pfam 4 129 126 PF01873 none Domain found in IF2B/IF5 IPR002735
SUPERFAMILY 98 133 36 SSF75689 none none IPR016190
SUPERFAMILY 10 101 92 SSF100966 none none IPR016189
Gene3D 315 443 129 G3DSA:1.25.40.180 none none IPR016021
PANTHER 10 267 258 PTHR23001 none none none
SUPERFAMILY 294 437 144 SSF48371 none none IPR016024
Pfam 364 443 80 PF02020 none eIF4-gamma/eIF5/eIF2-epsilon IPR003307
PANTHER 292 443 152 PTHR23001 none none none
Coils 159 180 22 Coil none none none
PANTHER 292 443 152 PTHR23001:SF7 none none none
PANTHER 10 267 258 PTHR23001:SF7 none none none
ProSiteProfiles 267 443 177 PS51363 none W2 domain profile. IPR003307
SMART 352 439 88 SM00515 none Domain at the C-termini of GCD6, eIF-2B epsilon, eIF-4 gamma and eIF-5 IPR003307

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4

0 Targeting