Protein : Qrob_P0626410.2 Q. robur
Protein Identifier  ? Qrob_P0626410.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR22600:SF8 - gb def: Beta-hexosaminidase (EC 3.2.1.52) Code Enzyme  EC:3.2.1.52
Gene Prediction Quality  validated Protein length 

Sequence

Length: 299  
Kegg Orthology  K12373
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
GO:0004563 beta-N-acetylhexosaminidase activity Catalysis of the hydrolysis of terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa003880mg 11 298 + 288 Gaps:14 51.66 542 75.71 2e-144 hypothetical protein
blastp_kegg lcl|pmum:103343509 11 298 + 288 Gaps:14 51.66 542 75.36 1e-143 beta-hexosaminidase 1
blastp_kegg lcl|tcc:TCM_042957 1 298 + 298 Gaps:11 52.56 546 74.56 3e-141 Beta-hexosaminidase 1 isoform 1
blastp_kegg lcl|vvi:100251825 9 298 + 290 Gaps:17 51.20 541 73.29 2e-132 beta-hexosaminidase subunit B2-like
blastp_kegg lcl|cic:CICLE_v10031139mg 11 298 + 288 Gaps:24 66.02 415 71.17 3e-128 hypothetical protein
blastp_kegg lcl|mdm:103434574 6 298 + 293 Gaps:16 51.86 538 71.33 4e-127 beta-hexosaminidase 1-like
blastp_kegg lcl|cmo:103500188 7 298 + 292 Gaps:13 51.93 545 67.84 5e-127 beta-hexosaminidase 1
blastp_kegg lcl|pxb:103928564 8 298 + 291 Gaps:16 51.49 538 71.48 7e-127 beta-hexosaminidase 1-like
blastp_kegg lcl|pxb:103948369 8 298 + 291 Gaps:16 51.49 538 71.48 9e-127 beta-hexosaminidase 1-like
blastp_kegg lcl|pop:POPTR_0010s21790g 12 298 + 287 Gaps:18 50.66 531 72.12 3e-126 POPTRDRAFT_1092225 hypothetical protein
blastp_pdb 3lmy_B 21 298 + 278 Gaps:29 47.30 556 36.88 2e-36 mol:protein length:556 Beta-hexosaminidase subunit beta
blastp_pdb 3lmy_A 21 298 + 278 Gaps:29 47.30 556 36.88 2e-36 mol:protein length:556 Beta-hexosaminidase subunit beta
blastp_pdb 2gjx_G 41 298 + 258 Gaps:29 47.93 507 38.27 3e-36 mol:protein length:507 Beta-hexosaminidase beta chain
blastp_pdb 2gjx_F 41 298 + 258 Gaps:29 47.93 507 38.27 3e-36 mol:protein length:507 Beta-hexosaminidase beta chain
blastp_pdb 2gjx_C 41 298 + 258 Gaps:29 47.93 507 38.27 3e-36 mol:protein length:507 Beta-hexosaminidase beta chain
blastp_pdb 2gjx_B 41 298 + 258 Gaps:29 47.93 507 38.27 3e-36 mol:protein length:507 Beta-hexosaminidase beta chain
blastp_pdb 1np0_B 41 298 + 258 Gaps:29 47.93 507 38.27 3e-36 mol:protein length:507 beta-hexosaminidase beta chain
blastp_pdb 1np0_A 41 298 + 258 Gaps:29 47.93 507 38.27 3e-36 mol:protein length:507 beta-hexosaminidase beta chain
blastp_pdb 1now_B 41 298 + 258 Gaps:29 47.93 507 38.27 3e-36 mol:protein length:507 beta-hexosaminidase beta chain
blastp_pdb 1now_A 41 298 + 258 Gaps:29 47.93 507 38.27 3e-36 mol:protein length:507 beta-hexosaminidase beta chain
blastp_uniprot_sprot sp|A7WM73|HEXO1_ARATH 8 298 + 291 Gaps:17 51.76 541 69.64 6e-127 Beta-hexosaminidase 1 OS Arabidopsis thaliana GN HEXO1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8L7S6|HEXO3_ARATH 41 298 + 258 Gaps:18 45.98 535 48.78 4e-71 Beta-hexosaminidase 3 OS Arabidopsis thaliana GN HEXO3 PE 1 SV 1
blastp_uniprot_sprot sp|Q54K56|HEXB2_DICDI 41 298 + 258 Gaps:36 41.49 564 44.87 7e-55 Beta-hexosaminidase subunit B2 OS Dictyostelium discoideum GN hexb2 PE 3 SV 1
blastp_uniprot_sprot sp|Q54K55|HEXB1_DICDI 41 298 + 258 Gaps:27 41.61 560 40.34 7e-47 Beta-hexosaminidase subunit B1 OS Dictyostelium discoideum GN hexb1 PE 3 SV 1
blastp_uniprot_sprot sp|Q54SC9|HEXA2_DICDI 8 298 + 291 Gaps:37 47.69 541 37.60 6e-38 Beta-hexosaminidase subunit A2 OS Dictyostelium discoideum GN hexa2 PE 3 SV 1
blastp_uniprot_sprot sp|P13723|HEXA1_DICDI 43 298 + 256 Gaps:29 42.67 532 37.44 8e-37 Beta-hexosaminidase subunit A1 OS Dictyostelium discoideum GN hexa1 PE 1 SV 1
blastp_uniprot_sprot sp|P07686|HEXB_HUMAN 21 298 + 278 Gaps:29 47.30 556 36.88 6e-36 Beta-hexosaminidase subunit beta OS Homo sapiens GN HEXB PE 1 SV 3
blastp_uniprot_sprot sp|Q6AXR4|HEXB_RAT 41 298 + 258 Gaps:39 45.25 537 39.09 7e-36 Beta-hexosaminidase subunit beta OS Rattus norvegicus GN Hexb PE 2 SV 1
blastp_uniprot_sprot sp|P49614|HEXB_FELCA 31 298 + 268 Gaps:35 47.65 531 38.34 1e-35 Beta-hexosaminidase subunit beta OS Felis catus GN HEXB PE 2 SV 2
blastp_uniprot_sprot sp|Q619W7|HEXA_CAEBR 14 298 + 285 Gaps:30 47.64 552 36.50 9e-35 Beta-hexosaminidase A OS Caenorhabditis briggsae GN hex-1 PE 3 SV 2

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 10 21 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 40 174 135 G3DSA:3.30.379.10 none none IPR029018
SUPERFAMILY 191 298 108 SSF51445 none none IPR017853
Gene3D 175 298 124 G3DSA:3.20.20.80 none none IPR013781
Pfam 191 298 108 PF00728 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20, catalytic domain IPR015883
SUPERFAMILY 41 190 150 SSF55545 none none IPR029018
PANTHER 41 298 258 PTHR22600:SF8 none none none
Phobius 27 298 272 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 214 235 22 PR00738 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20 signature IPR025705
PRINTS 277 294 18 PR00738 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20 signature IPR025705
PRINTS 146 166 21 PR00738 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20 signature IPR025705
PRINTS 185 202 18 PR00738 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" Glycosyl hydrolase family 20 signature IPR025705
Phobius 1 26 26 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 22 26 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 41 166 126 PF14845 "KEGG:00511+3.2.1.52","KEGG:00513+3.2.1.52","KEGG:00520+3.2.1.52","KEGG:00531+3.2.1.52","KEGG:00603+3.2.1.52","KEGG:00604+3.2.1.52","MetaCyc:PWY-6902" beta-acetyl hexosaminidase like IPR029019
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
PANTHER 41 298 258 PTHR22600 none none none

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 26 25
SignalP_EUK 1 26 25
SignalP_GRAM_NEGATIVE 1 26 25

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9

0 Targeting