Protein : Qrob_P0618360.2 Q. robur
Protein Identifier  ? Qrob_P0618360.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=2) PF07823 - Cyclic phosphodiesterase-like protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 188  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0004112 cyclic-nucleotide phosphodiesterase activity Catalysis of the reaction: a nucleoside cyclic phosphate + H2O = a nucleoside phosphate.

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1252890 2 187 + 186 none 97.89 190 69.89 1e-94 Cyclic phosphodiesterase putative
blastp_kegg lcl|cam:101513618 1 187 + 187 Gaps:4 87.98 208 69.40 1e-93 cyclic phosphodiesterase-like
blastp_kegg lcl|pop:POPTR_0011s03180g 10 187 + 178 none 93.68 190 73.03 9e-93 POPTRDRAFT_1093658 Cyclic phosphodiesterase family protein
blastp_kegg lcl|mtr:MTR_8g087820 1 187 + 187 Gaps:3 100.00 184 66.85 6e-90 Cyclic phosphodiesterase
blastp_kegg lcl|fve:101302141 9 187 + 179 none 83.26 215 70.95 7e-90 cyclic phosphodiesterase-like isoform 1
blastp_kegg lcl|cic:CICLE_v10016833mg 10 187 + 178 none 93.68 190 70.79 2e-89 hypothetical protein
blastp_kegg lcl|pxb:103951210 11 187 + 177 none 93.16 190 72.32 1e-88 cyclic phosphodiesterase-like
blastp_kegg lcl|cit:102619157 10 187 + 178 none 93.68 190 70.22 2e-88 cyclic phosphodiesterase-like
blastp_kegg lcl|tcc:TCM_029601 1 187 + 187 Gaps:1 55.19 337 74.73 2e-88 RNA ligase/cyclic nucleotide phosphodiesterase family protein
blastp_kegg lcl|vvi:100251559 4 187 + 184 none 99.46 185 66.30 9e-88 cyclic phosphodiesterase-like
blastp_pdb 1jh7_A 8 186 + 179 none 94.71 189 59.22 9e-72 mol:protein length:189 cyclic phosphodiesterase
blastp_pdb 1jh6_B 8 186 + 179 none 94.71 189 59.22 9e-72 mol:protein length:189 cyclic phosphodiesterase
blastp_pdb 1jh6_A 8 186 + 179 none 94.71 189 59.22 9e-72 mol:protein length:189 cyclic phosphodiesterase
blastp_pdb 1fsi_C 8 186 + 179 none 94.71 189 59.22 9e-72 mol:protein length:189 CYCLIC PHOSPHODIESTERASE
blastp_pdb 1fsi_B 8 186 + 179 none 94.71 189 59.22 9e-72 mol:protein length:189 CYCLIC PHOSPHODIESTERASE
blastp_pdb 1fsi_A 8 186 + 179 none 94.71 189 59.22 9e-72 mol:protein length:189 CYCLIC PHOSPHODIESTERASE
blastp_uniprot_sprot sp|O04147|CPD_ARATH 8 186 + 179 none 98.90 181 59.22 2e-71 Cyclic phosphodiesterase OS Arabidopsis thaliana GN At4g18930 PE 1 SV 1
rpsblast_cdd gnl|CDD|149088 15 184 + 170 Gaps:25 98.44 192 32.28 1e-31 pfam07823 CPDase Cyclic phosphodiesterase-like protein. Cyclic phosphodiesterase (CPDase) is involved in the tRNA splicing pathway. This protein exhibits a bilobal arrangement of two alpha-beta modules. Two antiparallel helices are found on the outer side of each lobe and frame an antiparallel beta-sheet that is wrapped around an accessible cleft. Moreover the beta-strands of each lobe interact with the other lobe. The central water-filled cavity houses the enzyme's active site.
rpsblast_cdd gnl|CDD|205741 20 167 + 148 Gaps:15 98.03 152 24.16 6e-10 pfam13563 2_5_RNA_ligase2 2'-5' RNA ligase superfamily. This family contains proteins related to pfam02834. These proteins are likely to be enzymes but they may not share the RNA ligase activity.

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 14 182 169 PF07823 none Cyclic phosphodiesterase-like protein IPR012386
PIRSF 1 186 186 PIRSF017903 none none IPR012386
Coils 130 151 22 Coil none none none
SUPERFAMILY 9 185 177 SSF55144 none none IPR009097
Gene3D 10 186 177 G3DSA:3.90.1140.10 none none IPR009097

0 Localization

0 Qtllist

0 Targeting