Protein : Qrob_P0618350.2 Q. robur
Protein Identifier  ? Qrob_P0618350.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PF07823 - Cyclic phosphodiesterase-like protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 188  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0004112 cyclic-nucleotide phosphodiesterase activity Catalysis of the reaction: a nucleoside cyclic phosphate + H2O = a nucleoside phosphate.

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_1252890 2 187 + 186 none 97.89 190 71.51 3e-100 Cyclic phosphodiesterase putative
blastp_kegg lcl|fve:101302141 9 187 + 179 none 83.26 215 74.86 4e-98 cyclic phosphodiesterase-like isoform 1
blastp_kegg lcl|pop:POPTR_0011s03180g 10 187 + 178 none 93.68 190 74.72 6e-98 POPTRDRAFT_1093658 Cyclic phosphodiesterase family protein
blastp_kegg lcl|cam:101513618 1 187 + 187 Gaps:4 87.98 208 71.58 1e-97 cyclic phosphodiesterase-like
blastp_kegg lcl|mtr:MTR_8g087820 1 187 + 187 Gaps:3 100.00 184 69.02 1e-94 Cyclic phosphodiesterase
blastp_kegg lcl|cit:102619157 10 187 + 178 none 93.68 190 72.47 3e-94 cyclic phosphodiesterase-like
blastp_kegg lcl|pxb:103951210 11 187 + 177 none 93.16 190 74.01 5e-94 cyclic phosphodiesterase-like
blastp_kegg lcl|cic:CICLE_v10016833mg 10 187 + 178 none 93.68 190 71.91 1e-93 hypothetical protein
blastp_kegg lcl|tcc:TCM_029601 1 187 + 187 Gaps:1 55.19 337 76.34 3e-93 RNA ligase/cyclic nucleotide phosphodiesterase family protein
blastp_kegg lcl|vvi:100251559 4 187 + 184 none 99.46 185 67.93 7e-93 cyclic phosphodiesterase-like
blastp_pdb 1jh7_A 8 187 + 180 none 95.24 189 60.00 8e-76 mol:protein length:189 cyclic phosphodiesterase
blastp_pdb 1jh6_B 8 187 + 180 none 95.24 189 60.00 8e-76 mol:protein length:189 cyclic phosphodiesterase
blastp_pdb 1jh6_A 8 187 + 180 none 95.24 189 60.00 8e-76 mol:protein length:189 cyclic phosphodiesterase
blastp_pdb 1fsi_C 8 187 + 180 none 95.24 189 60.00 8e-76 mol:protein length:189 CYCLIC PHOSPHODIESTERASE
blastp_pdb 1fsi_B 8 187 + 180 none 95.24 189 60.00 8e-76 mol:protein length:189 CYCLIC PHOSPHODIESTERASE
blastp_pdb 1fsi_A 8 187 + 180 none 95.24 189 60.00 8e-76 mol:protein length:189 CYCLIC PHOSPHODIESTERASE
blastp_uniprot_sprot sp|O04147|CPD_ARATH 8 186 + 179 none 98.90 181 60.34 2e-75 Cyclic phosphodiesterase OS Arabidopsis thaliana GN At4g18930 PE 1 SV 1
rpsblast_cdd gnl|CDD|149088 15 184 + 170 Gaps:25 98.44 192 31.75 5e-34 pfam07823 CPDase Cyclic phosphodiesterase-like protein. Cyclic phosphodiesterase (CPDase) is involved in the tRNA splicing pathway. This protein exhibits a bilobal arrangement of two alpha-beta modules. Two antiparallel helices are found on the outer side of each lobe and frame an antiparallel beta-sheet that is wrapped around an accessible cleft. Moreover the beta-strands of each lobe interact with the other lobe. The central water-filled cavity houses the enzyme's active site.
rpsblast_cdd gnl|CDD|205741 20 167 + 148 Gaps:15 98.03 152 24.16 2e-08 pfam13563 2_5_RNA_ligase2 2'-5' RNA ligase superfamily. This family contains proteins related to pfam02834. These proteins are likely to be enzymes but they may not share the RNA ligase activity.

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PIRSF 1 186 186 PIRSF017903 none none IPR012386
Pfam 14 182 169 PF07823 none Cyclic phosphodiesterase-like protein IPR012386
SUPERFAMILY 8 185 178 SSF55144 none none IPR009097
Gene3D 10 186 177 G3DSA:3.90.1140.10 none none IPR009097
Coils 130 151 22 Coil none none none

0 Localization

0 Qtllist

0 Targeting