Protein : Qrob_P0609880.2 Q. robur
Protein Identifier  ? Qrob_P0609880.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) 1.2.1.12 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating). Code Enzyme  EC:1.2.1.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 338  
Kegg Orthology  K00134
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0051287 NAD binding Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
GO:0050661 NADP binding Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
GO:0006006 glucose metabolic process The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103403121 3 335 + 333 none 97.65 341 92.19 0.0 glyceraldehyde-3-phosphate dehydrogenase cytosolic
blastp_kegg lcl|pop:POPTR_0001s36290g 1 337 + 337 none 100.00 337 90.80 0.0 POPTRDRAFT_706905 glyceraldehyde 3-phosphate dehydrogenase family protein
blastp_kegg lcl|vvi:100233024 1 337 + 337 none 100.00 337 89.91 0.0 GAPDH glyceraldehyde-3-phosphate dehydrogenase
blastp_kegg lcl|csv:101214545 1 337 + 337 none 100.00 337 89.91 0.0 glyceraldehyde-3-phosphate dehydrogenase-like
blastp_kegg lcl|pmum:103321966 3 335 + 333 none 97.94 340 91.29 0.0 glyceraldehyde-3-phosphate dehydrogenase cytosolic
blastp_kegg lcl|sot:102577868 2 334 + 333 none 98.52 338 91.29 0.0 GAPDH glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
blastp_kegg lcl|cmo:103485508 1 337 + 337 none 100.00 337 89.61 0.0 glyceraldehyde-3-phosphate dehydrogenase
blastp_kegg lcl|tcc:TCM_010757 3 337 + 335 none 97.95 342 90.75 0.0 Glyceraldehyde-3-phosphate dehydrogenase C2 isoform 1
blastp_kegg lcl|pxb:103949900 3 335 + 333 none 97.65 341 90.69 0.0 GDPHc2 glyceraldehyde-3-phosphate dehydrogenase cytosolic
blastp_kegg lcl|pop:POPTR_0012s09570g 1 337 + 337 none 99.70 338 88.72 0.0 POPTRDRAFT_728998 glyceraldehyde-3-phosphate dehydrogenase family protein
blastp_pdb 3e5r_C 1 337 + 337 none 100.00 337 86.05 0.0 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e5r_B 1 337 + 337 none 100.00 337 86.05 0.0 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e5r_A 1 337 + 337 none 100.00 337 86.05 0.0 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e5r_O 1 337 + 337 none 100.00 337 86.05 0.0 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e6a_C 2 337 + 336 none 100.00 336 86.01 0.0 mol:protein length:336 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e6a_B 2 337 + 336 none 100.00 336 86.01 0.0 mol:protein length:336 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e6a_A 2 337 + 336 none 100.00 336 86.01 0.0 mol:protein length:336 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e6a_O 2 337 + 336 none 100.00 336 86.01 0.0 mol:protein length:336 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 1znq_Q 1 335 + 335 Gaps:2 98.52 338 69.97 2e-169 mol:protein length:338 Glyceraldehyde-3-phosphate dehydrogenase liv
blastp_pdb 1znq_R 1 335 + 335 Gaps:2 98.52 338 69.97 2e-169 mol:protein length:338 Glyceraldehyde-3-phosphate dehydrogenase liv
blastp_uniprot_sprot sp|Q7FAH2|G3PC2_ORYSJ 1 337 + 337 none 100.00 337 89.32 0.0 Glyceraldehyde-3-phosphate dehydrogenase 2 cytosolic OS Oryza sativa subsp. japonica GN GAPC2 PE 1 SV 1
blastp_uniprot_sprot sp|P26518|G3PC_MAGLI 3 337 + 335 Gaps:2 98.83 341 89.61 0.0 Glyceraldehyde-3-phosphate dehydrogenase cytosolic OS Magnolia liliiflora GN GAPC PE 2 SV 1
blastp_uniprot_sprot sp|Q42671|G3PC_CRAPL 1 337 + 337 none 100.00 337 88.43 0.0 Glyceraldehyde-3-phosphate dehydrogenase cytosolic OS Craterostigma plantagineum GN GAPC PE 2 SV 1
blastp_uniprot_sprot sp|P25861|G3PC_ANTMA 1 337 + 337 none 100.00 337 88.72 0.0 Glyceraldehyde-3-phosphate dehydrogenase cytosolic OS Antirrhinum majus GN GAPC PE 1 SV 1
blastp_uniprot_sprot sp|Q9FX54|G3PC2_ARATH 3 334 + 332 none 98.22 338 88.86 0.0 Glyceraldehyde-3-phosphate dehydrogenase GAPC2 cytosolic OS Arabidopsis thaliana GN GAPC2 PE 1 SV 1
blastp_uniprot_sprot sp|P34783|G3P_ATRNU 1 334 + 334 none 92.78 360 87.72 0.0 Glyceraldehyde-3-phosphate dehydrogenase OS Atriplex nummularia PE 2 SV 1
blastp_uniprot_sprot sp|P26521|G3PC_RANAC 2 337 + 336 none 99.41 338 88.10 0.0 Glyceraldehyde-3-phosphate dehydrogenase cytosolic OS Ranunculus acris GN GAPC PE 2 SV 1
blastp_uniprot_sprot sp|Q6K5G8|G3PC3_ORYSJ 1 335 + 335 none 99.41 337 88.06 0.0 Glyceraldehyde-3-phosphate dehydrogenase 3 cytosolic OS Oryza sativa subsp. japonica GN GAPC3 PE 2 SV 1
blastp_uniprot_sprot sp|P34921|G3PC_DIACA 1 333 + 333 none 98.52 338 87.99 0.0 Glyceraldehyde-3-phosphate dehydrogenase cytosolic OS Dianthus caryophyllus GN GAPC PE 1 SV 1
blastp_uniprot_sprot sp|P17878|G3PC_MESCR 1 337 + 337 none 100.00 337 85.76 0.0 Glyceraldehyde-3-phosphate dehydrogenase cytosolic OS Mesembryanthemum crystallinum GN GAPC PE 2 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 4 154 151 SM00846 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IPR020828
Gene3D 3 162 160 G3DSA:3.40.50.720 none none IPR016040
PIRSF 2 337 336 PIRSF000149 "Reactome:REACT_474" none IPR020831
TIGRFAM 5 328 324 TIGR01534 "KEGG:00010+1.2.1.12","KEGG:00710+1.2.1.12","MetaCyc:PWY-1042","MetaCyc:PWY-5484","MetaCyc:PWY-6901","MetaCyc:PWY-7003","Reactome:REACT_474","UniPathway:UPA00109" GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I IPR006424
Pfam 4 154 151 PF00044 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IPR020828
SUPERFAMILY 3 170 168 SSF51735 none none none
ProSitePatterns 152 159 8 PS00071 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase active site. IPR020830
Gene3D 163 318 156 G3DSA:3.30.360.10 none none none
SUPERFAMILY 153 316 164 SSF55347 none none none
Pfam 159 316 158 PF02800 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IPR020829
PRINTS 113 126 14 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
PRINTS 232 249 18 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
PRINTS 175 191 17 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
PRINTS 272 287 16 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
PRINTS 148 166 19 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
PANTHER 1 337 337 PTHR10836 "Reactome:REACT_474";signature_desc=GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE none IPR020831
PANTHER 1 337 337 PTHR10836:SF30 none none none

0 Localization

17 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting