Protein : Qrob_P0602160.2 Q. robur
Protein Identifier  ? Qrob_P0602160.2 Organism . Name  Quercus robur
Protein Description  (M=1) PTHR18929//PTHR18929:SF51 - PROTEIN DISULFIDE ISOMERASE // SUBFAMILY NOT NAMED Alias (in v1)  Qrob_P0238910.1
Code Enzyme  EC:5.3.4.1 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 578  
Kegg Orthology  K09580
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
GO:0005783 endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
GO:0016853 isomerase activity Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.

49 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103956775 1 577 + 577 Gaps:9 100.00 572 76.57 0.0 protein disulfide isomerase-like 1-4
blastp_kegg lcl|mdm:103418849 1 577 + 577 Gaps:9 100.00 572 75.87 0.0 protein disulfide isomerase-like 1-4
blastp_kegg lcl|pop:POPTR_0009s01920g 1 577 + 577 Gaps:14 100.00 583 75.99 0.0 POPTRDRAFT_723538 thioredoxin family protein
blastp_kegg lcl|pper:PRUPE_ppa003432mg 1 577 + 577 Gaps:10 100.00 575 77.22 0.0 hypothetical protein
blastp_kegg lcl|pxb:103927850 1 564 + 564 Gaps:8 97.38 573 77.24 0.0 protein disulfide isomerase-like 1-4
blastp_kegg lcl|mdm:103447880 1 566 + 566 Gaps:8 97.73 573 76.61 0.0 protein disulfide isomerase-like 1-4
blastp_kegg lcl|tcc:TCM_042047 4 577 + 574 Gaps:22 99.32 586 73.88 0.0 Disulfide isomerase L-2 isoform 1
blastp_kegg lcl|fve:101292100 1 577 + 577 Gaps:13 100.00 566 76.50 0.0 protein disulfide isomerase-like 1-4-like
blastp_kegg lcl|pmum:103325464 1 577 + 577 Gaps:20 100.00 563 77.26 0.0 protein disulfide isomerase-like 1-4
blastp_kegg lcl|cam:101514720 16 577 + 562 Gaps:22 97.69 563 75.09 0.0 protein disulfide isomerase-like 1-4-like
blastp_pdb 3f8u_C 90 550 + 461 Gaps:47 97.09 481 37.47 1e-67 mol:protein length:481 Protein disulfide-isomerase A3ERp57
blastp_pdb 3f8u_A 90 550 + 461 Gaps:47 97.09 481 37.47 1e-67 mol:protein length:481 Protein disulfide-isomerase A3ERp57
blastp_pdb 3uem_A 92 542 + 451 Gaps:27 95.29 361 40.70 1e-54 mol:protein length:361 Protein disulfide-isomerase
blastp_pdb 3boa_A 98 542 + 445 Gaps:66 89.48 504 33.04 7e-51 mol:protein length:504 Protein disulfide-isomerase
blastp_pdb 2b5e_A 98 542 + 445 Gaps:66 89.48 504 33.04 7e-51 mol:protein length:504 Protein disulfide-isomerase
blastp_pdb 1mek_A 94 541 + 448 Gaps:11 96.67 120 63.79 6e-37 mol:protein length:120 PROTEIN DISULFIDE ISOMERASE
blastp_pdb 2dmm_A 90 543 + 454 Gaps:8 89.44 142 59.06 2e-33 mol:protein length:142 Protein disulfide-isomerase A3
blastp_pdb 2dj3_A 116 557 + 442 Gaps:5 96.24 133 50.78 3e-27 mol:protein length:133 Protein disulfide-isomerase A4
blastp_pdb 2kp1_A 91 542 + 452 Gaps:18 95.04 121 63.48 1e-26 mol:protein length:121 Protein disulfide-isomerase
blastp_pdb 2djj_A 91 542 + 452 Gaps:18 95.04 121 63.48 1e-26 mol:protein length:121 Protein disulfide-isomerase
blastp_uniprot_sprot sp|Q9FF55|PDI14_ARATH 84 577 + 494 Gaps:13 84.92 597 71.01 0.0 Protein disulfide isomerase-like 1-4 OS Arabidopsis thaliana GN PDIL1-4 PE 1 SV 1
blastp_uniprot_sprot sp|Q8VX13|PDI13_ARATH 14 577 + 564 Gaps:14 97.06 579 63.17 0.0 Protein disulfide isomerase-like 1-3 OS Arabidopsis thaliana GN PDIL1-3 PE 2 SV 1
blastp_uniprot_sprot sp|Q67IX6|PDI14_ORYSJ 93 576 + 484 Gaps:7 85.79 563 64.18 0.0 Protein disulfide isomerase-like 1-4 OS Oryza sativa subsp. japonica GN PDIL1-4 PE 2 SV 1
blastp_uniprot_sprot sp|P05307|PDIA1_BOVIN 87 542 + 456 Gaps:21 90.00 510 40.52 1e-100 Protein disulfide-isomerase OS Bos taurus GN P4HB PE 1 SV 1
blastp_uniprot_sprot sp|Q2HWU2|PDIA1_MACFU 94 542 + 449 Gaps:20 88.82 510 40.18 8e-99 Protein disulfide-isomerase OS Macaca fuscata fuscata GN P4HB PE 2 SV 1
blastp_uniprot_sprot sp|P21195|PDIA1_RABIT 87 542 + 456 Gaps:16 90.37 509 38.91 3e-98 Protein disulfide-isomerase OS Oryctolagus cuniculus GN P4HB PE 2 SV 1
blastp_uniprot_sprot sp|P07237|PDIA1_HUMAN 94 542 + 449 Gaps:20 89.17 508 39.96 3e-98 Protein disulfide-isomerase OS Homo sapiens GN P4HB PE 1 SV 3
blastp_uniprot_sprot sp|Q17770|PDI2_CAEEL 94 542 + 449 Gaps:14 91.08 493 38.98 2e-97 Protein disulfide-isomerase 2 OS Caenorhabditis elegans GN pdi-2 PE 1 SV 1
blastp_uniprot_sprot sp|Q5R5B6|PDIA1_PONAB 94 542 + 449 Gaps:20 89.17 508 39.74 6e-97 Protein disulfide-isomerase OS Pongo abelii GN P4HB PE 2 SV 1
blastp_uniprot_sprot sp|P09102|PDIA1_CHICK 87 542 + 456 Gaps:16 89.32 515 39.57 1e-96 Protein disulfide-isomerase OS Gallus gallus GN P4HB PE 1 SV 3

29 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
TIGRFAM 102 199 98 TIGR01126 none pdi_dom: protein disulfide-isomerase domain IPR005788
Gene3D 207 315 109 G3DSA:3.40.30.10 none none IPR012336
SUPERFAMILY 207 315 109 SSF52833 none none IPR012336
PRINTS 116 124 9 PR00421 none Thioredoxin family signature none
PRINTS 165 176 12 PR00421 none Thioredoxin family signature none
PRINTS 124 133 10 PR00421 none Thioredoxin family signature none
ProSiteProfiles 414 543 130 PS51352 none Thioredoxin domain profile. IPR012336
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
ProSitePatterns 117 135 19 PS00194 none Thioredoxin family active site. IPR017937
SUPERFAMILY 90 201 112 SSF52833 none none IPR012336
ProSitePatterns 456 474 19 PS00194 none Thioredoxin family active site. IPR017937
Phobius 22 577 556 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 432 543 112 G3DSA:3.40.30.10 none none IPR012336
Gene3D 93 202 110 G3DSA:3.40.30.10 none none IPR012336
Phobius 17 21 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 90 577 488 PTHR18929:SF51 none none none
PANTHER 1 32 32 PTHR18929:SF51 none none none
Phobius 5 16 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 337 421 85 G3DSA:3.40.30.10 none none IPR012336
SUPERFAMILY 432 542 111 SSF52833 none none IPR012336
ProSiteProfiles 84 201 118 PS51352 none Thioredoxin domain profile. IPR012336
Pfam 239 410 172 PF13848 none Thioredoxin-like domain none
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 436 540 105 PF00085 none Thioredoxin IPR013766
Pfam 98 198 101 PF00085 none Thioredoxin IPR013766
SUPERFAMILY 303 433 131 SSF52833 none none IPR012336
TIGRFAM 96 577 482 TIGR01130 none ER_PDI_fam: protein disulfide isomerase IPR005792
PANTHER 90 577 488 PTHR18929 none none none
PANTHER 1 32 32 PTHR18929 none none none

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 28 27
SignalP_GRAM_POSITIVE 1 28 27
SignalP_EUK 1 21 20

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting