Protein : Qrob_P0600860.2 Q. robur
Protein Identifier  ? Qrob_P0600860.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR22951//PTHR22951:SF18 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED (PTHR22951:SF18) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 329  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005543 phospholipid binding Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa020294mg 1 328 + 328 Gaps:24 93.91 345 57.10 3e-113 hypothetical protein
blastp_kegg lcl|pmum:103319585 1 328 + 328 Gaps:24 93.91 345 56.79 9e-113 putative clathrin assembly protein At4g40080
blastp_kegg lcl|pxb:103962475 1 328 + 328 Gaps:20 93.98 349 56.10 1e-111 putative clathrin assembly protein At4g40080
blastp_kegg lcl|tcc:TCM_034443 1 313 + 313 Gaps:11 95.50 333 55.66 1e-111 ENTH/ANTH/VHS superfamily protein putative
blastp_kegg lcl|vvi:100242023 1 313 + 313 Gaps:13 94.05 336 56.65 1e-110 putative clathrin assembly protein At4g40080-like
blastp_kegg lcl|cic:CICLE_v10001701mg 1 312 + 312 Gaps:13 91.35 347 55.52 4e-108 hypothetical protein
blastp_kegg lcl|pop:POPTR_0005s17470g 1 326 + 326 Gaps:19 92.07 353 54.15 7e-104 POPTRDRAFT_559046 clathrin assembly family protein
blastp_kegg lcl|fve:101302462 9 328 + 320 Gaps:14 91.53 354 47.53 1e-99 putative clathrin assembly protein At4g40080-like
blastp_kegg lcl|rcu:RCOM_1037910 1 328 + 328 Gaps:24 98.21 336 52.12 1e-94 clathrin assembly protein putative (EC:1.3.1.74)
blastp_kegg lcl|cit:102613248 1 312 + 312 Gaps:11 91.35 347 53.31 1e-94 putative clathrin assembly protein At4g40080-like
blastp_uniprot_sprot sp|Q8L936|CAP16_ARATH 1 320 + 320 Gaps:18 90.41 365 40.61 2e-71 Putative clathrin assembly protein At4g40080 OS Arabidopsis thaliana GN At4g40080 PE 2 SV 2
blastp_uniprot_sprot sp|Q8H0W9|CAP17_ARATH 9 286 + 278 Gaps:25 84.32 338 32.28 1e-23 Putative clathrin assembly protein At5g10410 OS Arabidopsis thaliana GN At5g10410 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FKQ2|CAP18_ARATH 1 286 + 286 Gaps:57 99.32 295 32.42 2e-19 Putative clathrin assembly protein At5g65370 OS Arabidopsis thaliana GN At5g65370 PE 3 SV 1
blastp_uniprot_sprot sp|Q8LF20|CAP2_ARATH 7 153 + 147 Gaps:2 22.21 653 34.48 2e-18 Putative clathrin assembly protein At2g25430 OS Arabidopsis thaliana GN At2g25430 PE 1 SV 2
blastp_uniprot_sprot sp|Q8LBH2|CAP8_ARATH 1 161 + 161 Gaps:6 27.85 571 34.59 6e-18 Putative clathrin assembly protein At2g01600 OS Arabidopsis thaliana GN At2g01600 PE 2 SV 2
blastp_uniprot_sprot sp|P94017|CAP9_ARATH 1 161 + 161 Gaps:10 22.98 692 35.22 4e-17 Putative clathrin assembly protein At1g14910 OS Arabidopsis thaliana GN At1g14910 PE 2 SV 2
blastp_uniprot_sprot sp|Q8S9J8|CAP1_ARATH 7 153 + 147 Gaps:2 22.83 635 31.03 4e-15 Probable clathrin assembly protein At4g32285 OS Arabidopsis thaliana GN At4g32285 PE 1 SV 2
blastp_uniprot_sprot sp|Q8VYT2|CAP6_ARATH 1 228 + 228 Gaps:24 39.60 601 26.89 6e-15 Putative clathrin assembly protein At4g25940 OS Arabidopsis thaliana GN At4g25940 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LVD8|CAP7_ARATH 1 161 + 161 Gaps:12 26.90 591 31.45 8e-15 Putative clathrin assembly protein At5g57200 OS Arabidopsis thaliana GN At5g57200 PE 3 SV 1
blastp_uniprot_sprot sp|Q9LHS0|CAP10_ARATH 7 231 + 225 Gaps:24 39.89 544 28.57 1e-14 Putative clathrin assembly protein At5g35200 OS Arabidopsis thaliana GN At5g35200 PE 1 SV 1
rpsblast_cdd gnl|CDD|48660 34 153 + 120 Gaps:6 97.44 117 29.82 1e-15 cd03564 ANTH_AP180_CALM ANTH domain family composed of adaptor protein 180 (AP180) clathrin assembly lymphoid myeloid leukemia protein (CALM) and similar proteins. A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. AP180 and CALM play important roles in clathrin-mediated endocytosis. AP180 is a brain-specific clathrin-binding protein which stimulates clathrin assembly during the recycling of synaptic vesicles. The ANTH domain is structurally similar to the VHS domain and is composed of a superhelix of eight alpha helices. ANTH domains bind both inositol phospholipids and proteins and contribute to the nucleation and formation of clathrin coats on membranes. ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the trans-Golgi network which suggests that the ANTH domain is a universal component of the machinery for clathrin-mediated membrane budding..
rpsblast_cdd gnl|CDD|203708 32 153 + 122 Gaps:11 42.81 278 27.73 4e-09 pfam07651 ANTH ANTH domain. AP180 is an endocytotic accessory proteins that has been implicated in the formation of clathrin-coated pits. The domain is involved in phosphatidylinositol 4 5-bisphosphate binding and is a universal adaptor for nucleation of clathrin coats.
rpsblast_cdd gnl|CDD|197619 33 153 + 121 Gaps:9 91.34 127 27.59 9e-08 smart00273 ENTH Epsin N-terminal homology (ENTH) domain.
rpsblast_kog gnl|CDD|35472 11 272 + 262 Gaps:16 51.32 491 28.17 5e-41 KOG0251 KOG0251 KOG0251 Clathrin assembly protein AP180 and related proteins contain ENTH domain [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 33 158 126 G3DSA:1.25.40.90 none none IPR008942
SUPERFAMILY 34 162 129 SSF48464 none none IPR008942
SMART 32 163 132 SM00273 none Epsin N-terminal homology (ENTH) domain IPR013809
PANTHER 5 319 315 PTHR22951:SF18 none none none
ProSiteProfiles 26 163 138 PS50942 none ENTH domain profile. IPR013809
Pfam 33 270 238 PF07651 none ANTH domain IPR011417
PANTHER 5 319 315 PTHR22951 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting