Protein : Qrob_P0600190.2 Q. robur
Protein Identifier  ? Qrob_P0600190.2 Organism . Name  Quercus robur
Score  87.4 Score Type  egn
Protein Description  (M=1) KOG0192//KOG0194//KOG0197//KOG0200//KOG0595//KOG1026//KOG1094//KOG1095//KOG1187//KOG3653 - Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]. // Protein tyrosine kinase [Signal transduction mechanisms]. // Tyrosine kinases [Signal transduction mechanisms]. // Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]. // Serine/threonine-protein kinase involved in autophagy [Posttranslational modification protein turnover chaperones Intracellular trafficking secretion and vesicular transport Signal transduction mechanisms]. // Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms Intracellular trafficking secretion and vesicular transport]. // Discoidin domain receptor DDR1 [Signal transduction mechanisms]. // Protein tyrosine kinase [Signal transduction mechanisms]. // Serine/threonine protein kinase [Signal transduction mechanisms]. // Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]. Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 478  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0004672 protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
GO:0006468 protein phosphorylation The process of introducing a phosphate group on to a protein.
GO:0004713 protein tyrosine kinase activity Catalysis of the reaction: ATP + a protein tyrosine = ADP + protein tyrosine phosphate.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_029298 3 453 + 451 Gaps:23 41.39 1034 71.50 0.0 Leucine-rich repeat transmembrane protein kinase
blastp_kegg lcl|pper:PRUPE_ppa001152mg 3 453 + 451 Gaps:28 47.93 895 71.56 0.0 hypothetical protein
blastp_kegg lcl|vvi:100256223 3 453 + 451 Gaps:24 41.13 1048 73.09 0.0 probable LRR receptor-like serine/threonine-protein kinase At1g56130-like
blastp_kegg lcl|vvi:100261421 3 457 + 455 Gaps:28 41.95 1037 73.33 0.0 probable LRR receptor-like serine/threonine-protein kinase At1g56130-like
blastp_kegg lcl|cic:CICLE_v10018029mg 3 453 + 451 Gaps:24 42.66 1001 71.19 0.0 hypothetical protein
blastp_kegg lcl|cit:102614009 3 453 + 451 Gaps:24 40.86 1045 70.96 0.0 probable LRR receptor-like serine/threonine-protein kinase At1g56140-like
blastp_kegg lcl|pop:POPTR_0003s14780g 2 453 + 452 Gaps:40 44.66 927 72.46 0.0 POPTRDRAFT_1074249 hypothetical protein
blastp_kegg lcl|tcc:TCM_029302 3 453 + 451 Gaps:25 41.59 1029 67.52 0.0 Leucine-rich repeat transmembrane protein kinase
blastp_kegg lcl|cit:102613120 3 453 + 451 Gaps:24 40.51 1054 69.32 0.0 probable LRR receptor-like serine/threonine-protein kinase At1g56140-like
blastp_kegg lcl|cic:CICLE_v10018038mg 3 452 + 450 Gaps:24 42.56 1001 69.72 0.0 hypothetical protein
blastp_pdb 3tl8_H 328 449 + 122 Gaps:8 36.68 349 43.75 8e-20 mol:protein length:349 BRASSINOSTEROID INSENSITIVE 1-associated rece
blastp_pdb 3tl8_G 328 449 + 122 Gaps:8 36.68 349 43.75 8e-20 mol:protein length:349 BRASSINOSTEROID INSENSITIVE 1-associated rece
blastp_pdb 3tl8_D 328 449 + 122 Gaps:8 36.68 349 43.75 8e-20 mol:protein length:349 BRASSINOSTEROID INSENSITIVE 1-associated rece
blastp_pdb 3tl8_A 328 449 + 122 Gaps:8 36.68 349 43.75 8e-20 mol:protein length:349 BRASSINOSTEROID INSENSITIVE 1-associated rece
blastp_pdb 2o8y_B 345 442 + 98 Gaps:11 35.91 298 41.12 1e-13 mol:protein length:298 Interleukin-1 receptor-associated kinase 4
blastp_pdb 2o8y_A 345 442 + 98 Gaps:11 35.91 298 41.12 1e-13 mol:protein length:298 Interleukin-1 receptor-associated kinase 4
blastp_pdb 2oid_D 345 442 + 98 Gaps:11 35.55 301 41.12 1e-13 mol:protein length:301 Interleukin-1 receptor-associated kinase 4
blastp_pdb 2oid_C 345 442 + 98 Gaps:11 35.55 301 41.12 1e-13 mol:protein length:301 Interleukin-1 receptor-associated kinase 4
blastp_pdb 2oid_B 345 442 + 98 Gaps:11 35.55 301 41.12 1e-13 mol:protein length:301 Interleukin-1 receptor-associated kinase 4
blastp_pdb 2oid_A 345 442 + 98 Gaps:11 35.55 301 41.12 1e-13 mol:protein length:301 Interleukin-1 receptor-associated kinase 4
blastp_uniprot_sprot sp|C0LGH2|Y1561_ARATH 3 457 + 455 Gaps:28 41.96 1032 54.50 8e-150 Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS Arabidopsis thaliana GN At1g56130 PE 1 SV 2
blastp_uniprot_sprot sp|C0LGH3|Y5614_ARATH 3 457 + 455 Gaps:28 41.92 1033 54.73 1e-138 Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS Arabidopsis thaliana GN At1g56140 PE 1 SV 2
blastp_uniprot_sprot sp|C0LGG8|Y5343_ARATH 13 456 + 444 Gaps:48 41.23 1038 41.59 4e-84 Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS Arabidopsis thaliana GN At1g53430 PE 1 SV 1
blastp_uniprot_sprot sp|C0LGG9|Y5344_ARATH 13 456 + 444 Gaps:48 41.35 1035 40.89 6e-83 Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS Arabidopsis thaliana GN At1g53440 PE 1 SV 2
blastp_uniprot_sprot sp|C0LGE0|Y1765_ARATH 6 450 + 445 Gaps:86 45.66 1014 39.52 1e-82 Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS Arabidopsis thaliana GN At1g07650 PE 1 SV 1
blastp_uniprot_sprot sp|C0LGG7|Y1534_ARATH 11 448 + 438 Gaps:91 45.02 953 41.03 4e-75 Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS Arabidopsis thaliana GN At1g53420 PE 2 SV 2
blastp_uniprot_sprot sp|C0LGN2|Y3148_ARATH 4 448 + 445 Gaps:89 45.10 1020 38.70 1e-73 Probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840 OS Arabidopsis thaliana GN LRR-RLK PE 1 SV 1
blastp_uniprot_sprot sp|Q9FXF2|RKF1_ARATH 6 447 + 442 Gaps:60 40.16 1021 41.22 2e-73 Probable LRR receptor-like serine/threonine-protein kinase RFK1 OS Arabidopsis thaliana GN RKF1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9ASQ6|Y1972_ARATH 13 452 + 440 Gaps:57 42.10 1019 41.72 5e-72 Probable LRR receptor-like serine/threonine-protein kinase At1g29720 OS Arabidopsis thaliana GN RFK1 PE 2 SV 3
blastp_uniprot_sprot sp|O64781|Y1639_ARATH 275 453 + 179 Gaps:16 23.23 831 37.82 5e-30 G-type lectin S-receptor-like serine/threonine-protein kinase At1g61390 OS Arabidopsis thaliana GN At1g61390 PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 424 476 53 G3DSA:1.10.510.10 none none none
Phobius 328 477 150 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 364 446 83 PF07714 none Protein tyrosine kinase IPR001245
SUPERFAMILY 343 457 115 SSF56112 none none IPR011009
PANTHER 249 450 202 PTHR24420:SF610 none none none
PANTHER 4 66 63 PTHR24420:SF610 none none none
SMART 361 474 114 SM00219 none Tyrosine kinase, catalytic domain IPR020635
PANTHER 249 450 202 PTHR24420 none none none
PANTHER 4 66 63 PTHR24420 none none none
Phobius 303 327 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 375 423 49 G3DSA:3.30.200.20 none none none
Gene3D 292 374 83 G3DSA:2.60.120.200 none none IPR013320
Phobius 1 302 302 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 217 279 63 PF11721 none Di-glucose binding within endoplasmic reticulum IPR021720
Pfam 72 197 126 PF11721 none Di-glucose binding within endoplasmic reticulum IPR021720
ProSiteProfiles 361 477 117 PS50011 none Protein kinase domain profile. IPR000719

1 Localization

Analysis Start End Length
TMHMM 303 325 22

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_aSeqBC_A4 Qrob_Chr08 8 v_15999_278 v_AP13YL15_395 32,52 4,22 57,22 lod 2,7561 6,7
Bourran2_2014_nFork*_A4 Qrob_Chr08 8 PIE175 s_1CD7GJ_1398 31,22 5,24 57,24 lod 2,6724 6,8
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL3_d13Cf Qrob_Chr08 8 v_5216_549 v_11625_20 37.08 12,26 54,9 lod 6.5888 0.04

0 Targeting