Protein : Qrob_P0594380.2 Q. robur
Protein Identifier  ? Qrob_P0594380.2 Organism . Name  Quercus robur
Score  85.2 Score Type  egn
Protein Description  (M=3) 6.3.2.8 - UDP-N-acetylmuramate--L-alanine ligase. Code Enzyme  EC:6.3.2.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 229  
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0009058 biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO:0016874 ligase activity Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100855090 36 208 + 173 none 31.98 541 68.79 2e-74 UDP-N-acetylmuramate--L-alanine ligase-like
blastp_kegg lcl|mdm:103443061 36 208 + 173 none 30.62 565 67.63 6e-74 uncharacterized LOC103443061
blastp_kegg lcl|pxb:103964323 36 208 + 173 none 30.30 571 67.05 4e-73 uncharacterized LOC103964323
blastp_kegg lcl|pmum:103333790 39 208 + 170 none 45.33 375 68.24 6e-73 uncharacterized LOC103333790
blastp_kegg lcl|pxb:103966175 36 208 + 173 none 28.74 602 65.90 4e-72 uncharacterized LOC103966175
blastp_kegg lcl|pxb:103966136 36 208 + 173 none 28.74 602 65.90 4e-72 uncharacterized LOC103966136
blastp_kegg lcl|sot:102591145 36 207 + 172 none 87.76 196 59.30 2e-69 uncharacterized LOC102591145
blastp_kegg lcl|tcc:TCM_015246 36 207 + 172 none 27.79 619 66.28 2e-69 Uncharacterized protein isoform 1
blastp_kegg lcl|cic:CICLE_v10004632mg 36 207 + 172 none 41.25 417 63.95 6e-68 hypothetical protein
blastp_kegg lcl|cit:102629810 36 207 + 172 none 29.91 575 63.37 2e-67 uncharacterized LOC102629810
blastp_pdb 1j6u_A 67 163 + 97 Gaps:2 21.11 469 48.48 2e-18 mol:protein length:469 UDP-N-acetylmuramate-alanine ligase MurC
blastp_pdb 2f00_B 67 164 + 98 Gaps:12 21.18 491 39.42 6e-16 mol:protein length:491 UDP-N-acetylmuramate--L-alanine ligase
blastp_pdb 2f00_A 67 164 + 98 Gaps:12 21.18 491 39.42 6e-16 mol:protein length:491 UDP-N-acetylmuramate--L-alanine ligase
blastp_pdb 1p3d_B 67 207 + 141 Gaps:19 30.32 475 37.50 1e-15 mol:protein length:475 UDP-N-acetylmuramate--alanine ligase
blastp_pdb 1p3d_A 67 207 + 141 Gaps:19 30.32 475 37.50 1e-15 mol:protein length:475 UDP-N-acetylmuramate--alanine ligase
blastp_pdb 1p31_B 67 207 + 141 Gaps:19 30.32 475 37.50 1e-15 mol:protein length:475 UDP-N-acetylmuramate--alanine ligase
blastp_pdb 1p31_A 67 207 + 141 Gaps:19 30.32 475 37.50 1e-15 mol:protein length:475 UDP-N-acetylmuramate--alanine ligase
blastp_pdb 1gqy_B 67 207 + 141 Gaps:19 30.32 475 37.50 1e-15 mol:protein length:475 UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
blastp_pdb 1gqy_A 67 207 + 141 Gaps:19 30.32 475 37.50 1e-15 mol:protein length:475 UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
blastp_pdb 1gqq_B 67 207 + 141 Gaps:19 30.32 475 37.50 1e-15 mol:protein length:475 UDP-N-ACETYLMURAMATE-L-ALANINE LIGASE
blastp_uniprot_sprot sp|C4Z4L9|MURC_EUBE2 60 218 + 159 Gaps:10 33.77 459 44.52 2e-31 UDP-N-acetylmuramate--L-alanine ligase OS Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN murC PE 3 SV 1
blastp_uniprot_sprot sp|A6TJM2|MURC_ALKMQ 66 213 + 148 Gaps:15 31.09 460 45.45 1e-30 UDP-N-acetylmuramate--L-alanine ligase OS Alkaliphilus metalliredigens (strain QYMF) GN murC PE 3 SV 1
blastp_uniprot_sprot sp|A8MK48|MURC_ALKOO 61 221 + 161 Gaps:2 34.19 465 37.11 6e-30 UDP-N-acetylmuramate--L-alanine ligase OS Alkaliphilus oremlandii (strain OhILAs) GN murC PE 3 SV 1
blastp_uniprot_sprot sp|A0PXK5|MURC_CLONN 67 220 + 154 Gaps:8 32.75 458 44.00 2e-29 UDP-N-acetylmuramate--L-alanine ligase OS Clostridium novyi (strain NT) GN murC PE 3 SV 1
blastp_uniprot_sprot sp|A0R015|MURC_MYCS2 67 219 + 153 Gaps:8 30.91 482 46.31 6e-29 UDP-N-acetylmuramate--L-alanine ligase OS Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155) GN murC PE 3 SV 1
blastp_uniprot_sprot sp|Q8R749|MURC_THETN 64 221 + 158 Gaps:8 33.48 460 40.91 8e-29 UDP-N-acetylmuramate--L-alanine ligase OS Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) GN murC PE 3 SV 1
blastp_uniprot_sprot sp|A3DIP6|MURC_CLOTH 60 218 + 159 Gaps:10 33.05 469 40.00 1e-28 UDP-N-acetylmuramate--L-alanine ligase OS Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN murC PE 3 SV 1
blastp_uniprot_sprot sp|B9MND8|MURC_CALBD 67 215 + 149 Gaps:7 32.09 455 41.10 2e-28 UDP-N-acetylmuramate--L-alanine ligase OS Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) GN murC PE 3 SV 1
blastp_uniprot_sprot sp|A4XGE5|MURC_CALS8 69 215 + 147 Gaps:7 31.65 455 43.06 4e-28 UDP-N-acetylmuramate--L-alanine ligase OS Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN murC PE 3 SV 1
blastp_uniprot_sprot sp|Q24ZG1|MURC_DESHY 67 211 + 145 Gaps:10 31.85 449 48.25 6e-28 UDP-N-acetylmuramate--L-alanine ligase OS Desulfitobacterium hafniense (strain Y51) GN murC PE 3 SV 2

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 72 208 137 SSF53244 "UniPathway:UPA00219" none IPR004101
PANTHER 67 207 141 PTHR23135:SF11 none none none
Phobius 1 25 25 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 75 208 134 G3DSA:3.90.190.20 "UniPathway:UPA00219" none IPR004101
PANTHER 67 207 141 PTHR23135 none none none
Phobius 51 228 178 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 26 50 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 73 154 82 PF02875 "UniPathway:UPA00219" Mur ligase family, glutamate ligase domain IPR004101

1 Localization

Analysis Start End Length
TMHMM 28 50 22

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran2_2002_QTL12_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 4,33 33,33 lod 6,5 9,1
Bourran2_2014_nEpis_A4 Qrob_Chr09 9 v_AQ16YP22_198 s_1BM1HR_1387 18,91 18,91 43,71 lod 2,6242 5,9

0 Targeting