Protein : Qrob_P0592090.2 Q. robur
Protein Identifier  ? Qrob_P0592090.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=53) PF07649 - C1-like domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 566  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0047134 protein-disulfide reductase activity Catalysis of the reaction: protein-dithiol + NAD(P)+ = protein-disulfide + NAD(P)H + H+.
GO:0035556 intracellular signal transduction The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0016s05820g 1 565 + 565 Gaps:216 98.96 675 52.25 1e-116 POPTRDRAFT_576373 DC1 domain-containing family protein
blastp_kegg lcl|tcc:TCM_025246 1 565 + 565 Gaps:235 98.81 674 53.45 6e-114 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|tcc:TCM_024834 1 565 + 565 Gaps:504 97.43 1246 51.57 7e-104 hypothetical protein
blastp_kegg lcl|tcc:TCM_025068 1 565 + 565 Gaps:208 97.91 670 50.00 6e-103 Cysteine/Histidine-rich C1 domain family protein putative isoform 1
blastp_kegg lcl|tcc:TCM_025071 1 565 + 565 Gaps:208 97.63 674 48.48 3e-99 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|tcc:TCM_042436 2 565 + 564 Gaps:215 95.91 733 52.06 9e-98 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|pop:POPTR_0016s04640g 1 565 + 565 Gaps:350 98.00 701 57.64 6e-94 POPTRDRAFT_576246 hypothetical protein
blastp_kegg lcl|pop:POPTR_0016s04400g 1 565 + 565 Gaps:370 97.99 698 53.07 1e-93 hypothetical protein
blastp_kegg lcl|tcc:TCM_042871 1 565 + 565 Gaps:160 98.05 667 43.88 1e-92 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|gmx:100810028 2 559 + 558 Gaps:71 92.24 567 38.24 1e-92 uncharacterized LOC100810028

20 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 424 502 79 SSF57889 none none none
SMART 67 114 48 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 10 55 46 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SMART 120 168 49 SM00109 none Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains) IPR002219
SUPERFAMILY 92 174 83 SSF57889 none none none
SUPERFAMILY 153 223 71 SSF57889 none none none
Gene3D 23 52 30 G3DSA:3.30.60.20 none none none
SUPERFAMILY 34 120 87 SSF57889 none none none
Gene3D 76 141 66 G3DSA:3.30.40.10 none none IPR013083
SUPERFAMILY 313 387 75 SSF57889 none none none
PANTHER 248 507 260 PTHR32410 none none none
PANTHER 2 229 228 PTHR32410 none none none
SMART 465 542 78 SM00249 none PHD zinc finger IPR001965
SMART 134 201 68 SM00249 none PHD zinc finger IPR001965
SUPERFAMILY 519 564 46 SSF57889 none none none
SMART 18 60 43 SM00291 none Zinc-binding domain, present in Dystrophin, CREB-binding protein. IPR000433
Pfam 134 163 30 PF07649 none C1-like domain IPR011424
Pfam 22 50 29 PF07649 none C1-like domain IPR011424
Pfam 302 329 28 PF07649 none C1-like domain IPR011424
Pfam 192 222 31 PF07649 none C1-like domain IPR011424

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting