Protein : Qrob_P0585330.2 Q. robur
Protein Identifier  ? Qrob_P0585330.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR13872:SF1 - OLIGOSACCHARYL TRANSFERASE Code Enzyme  EC:2.4.99.18
Gene Prediction Quality  validated Protein length 

Sequence

Length: 741  
Kegg Orthology  K07151
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006486 protein glycosylation A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
GO:0004576 oligosaccharyl transferase activity Catalysis of the transfer of a oligosaccharyl group to an acceptor molecule, typically another carbohydrate or a lipid.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100261650 16 740 + 725 Gaps:12 98.65 741 91.24 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3-like
blastp_kegg lcl|cit:102610458 32 740 + 709 Gaps:3 95.41 740 93.48 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like
blastp_kegg lcl|pxb:103946853 32 740 + 709 Gaps:3 94.51 747 94.05 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
blastp_kegg lcl|cmo:103504678 11 740 + 730 Gaps:4 97.46 747 90.52 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
blastp_kegg lcl|csv:101230946 9 740 + 732 Gaps:4 97.72 747 90.00 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3-like
blastp_kegg lcl|csv:101206027 9 740 + 732 Gaps:4 97.72 747 90.00 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3-like
blastp_kegg lcl|mdm:103438300 32 740 + 709 Gaps:3 94.51 747 93.77 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like
blastp_kegg lcl|pmum:103338863 3 740 + 738 Gaps:6 98.80 747 89.97 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B
blastp_kegg lcl|pper:PRUPE_ppa001886mg 3 740 + 738 Gaps:6 98.80 747 89.84 0.0 hypothetical protein
blastp_kegg lcl|fve:101311962 2 740 + 739 Gaps:10 98.78 738 90.67 0.0 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like
blastp_uniprot_sprot sp|Q9FX21|STT3B_ARATH 32 739 + 708 Gaps:3 95.92 735 89.22 0.0 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS Arabidopsis thaliana GN STT3B PE 1 SV 1
blastp_uniprot_sprot sp|Q7XQ88|STT3B_ORYSJ 31 739 + 709 Gaps:4 97.78 721 87.52 0.0 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS Oryza sativa subsp. japonica GN STT3B PE 2 SV 2
blastp_uniprot_sprot sp|Q54NM9|STT3_DICDI 8 739 + 732 Gaps:28 99.44 714 62.11 0.0 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 OS Dictyostelium discoideum GN stt3 PE 3 SV 1
blastp_uniprot_sprot sp|Q5RCE2|STT3A_PONAB 32 739 + 708 Gaps:34 98.44 705 61.67 0.0 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS Pongo abelii GN STT3A PE 2 SV 1
blastp_uniprot_sprot sp|P46977|STT3A_HUMAN 32 739 + 708 Gaps:34 98.44 705 61.67 0.0 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS Homo sapiens GN STT3A PE 1 SV 2
blastp_uniprot_sprot sp|P46978|STT3A_MOUSE 32 739 + 708 Gaps:34 98.44 705 61.67 0.0 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS Mus musculus GN Stt3a PE 1 SV 1
blastp_uniprot_sprot sp|Q2KJI2|STT3A_BOVIN 32 739 + 708 Gaps:34 98.44 705 61.67 0.0 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A OS Bos taurus GN STT3A PE 2 SV 1
blastp_uniprot_sprot sp|Q8TCJ2|STT3B_HUMAN 40 739 + 700 Gaps:12 85.96 826 56.48 0.0 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS Homo sapiens GN STT3B PE 1 SV 1
blastp_uniprot_sprot sp|Q3TDQ1|STT3B_MOUSE 40 739 + 700 Gaps:12 86.27 823 56.90 0.0 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B OS Mus musculus GN Stt3b PE 1 SV 2
blastp_uniprot_sprot sp|P46975|STT3_CAEEL 42 739 + 698 Gaps:17 92.87 757 55.19 0.0 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 OS Caenorhabditis elegans GN T12A2.2 PE 1 SV 1
rpsblast_cdd gnl|CDD|145580 42 691 + 650 Gaps:32 100.00 650 34.92 1e-131 pfam02516 STT3 Oligosaccharyl transferase STT3 subunit. This family consists of the oligosaccharyl transferase STT3 subunit and related proteins. The STT3 subunit is part of the oligosaccharyl transferase (OTase) complex of proteins and is required for its activity. In eukaryotes OTase transfers a lipid-linked core-oligosaccharide to selected asparagine residues in the ER. In the archaea STT3 occurs alone rather than in an OTase complex and is required for N-glycosylation of asparagines.
rpsblast_cdd gnl|CDD|31478 25 734 + 710 Gaps:50 94.44 773 24.11 3e-66 COG1287 COG1287 Uncharacterized membrane protein required for N-linked glycosylation [General function prediction only].
rpsblast_cdd gnl|CDD|200405 45 622 + 578 Gaps:120 71.90 815 22.35 5e-36 TIGR04154 archaeo_STT3 oligosaccharyl transferase archaeosortase A system-associated. Members of this protein family occur one to three members per genome in the same species of Euryarchaeota as contain the predicted protein-sorting enzyme archaeosortase (TIGR04125) and its cognate protein-sorting signal PGF-CTERM (TIGR04126).
rpsblast_kog gnl|CDD|37503 24 737 + 714 Gaps:5 95.47 751 63.18 0.0 KOG2292 KOG2292 KOG2292 Oligosaccharyltransferase STT3 subunit [Posttranslational modification protein turnover chaperones].

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 428 432 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 227 250 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 166 184 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 185 195 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 453 740 288 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 31 739 709 PTHR13872:SF1 none none none
PANTHER 31 739 709 PTHR13872 none none none
Phobius 293 311 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 41 61 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 62 107 46 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 405 410 6 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 196 221 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 108 128 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 350 385 36 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 386 404 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 282 292 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 161 165 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 40 40 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 433 452 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 323 349 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 251 261 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 411 427 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 140 160 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 312 322 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 262 281 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 222 226 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 129 139 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 43 585 543 PF02516 "UniPathway:UPA00378" Oligosaccharyl transferase STT3 subunit IPR003674

11 Localization

Analysis Start End Length
TMHMM 323 345 22
TMHMM 135 157 22
TMHMM 167 189 22
TMHMM 412 434 22
TMHMM 294 316 22
TMHMM 196 218 22
TMHMM 41 63 22
TMHMM 233 255 22
TMHMM 106 128 22
TMHMM 383 405 22
TMHMM 262 284 22

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL5_peak_Bud_burst_A4 Qrob_Chr10 10 s_1C8OKQ_688 v_12844_707 25,6 13,9 39,9 lod 2,7 6,1
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting