Protein : Qrob_P0581320.2 Q. robur
Protein Identifier  ? Qrob_P0581320.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PF01501//PF04720 - Glycosyl transferase family 8 // Protein of unknown function (DUF506) Code Enzyme  EC:2.4.1.123
Gene Prediction Quality  validated Protein length 

Sequence

Length: 241  
Kegg Orthology  K18819
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0016757 transferase activity, transferring glycosyl groups Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).
GO:0006012 galactose metabolic process The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.
GO:0047216 inositol 3-alpha-galactosyltransferase activity Catalysis of the reaction: myo-inositol + UDP-galactose = O-alpha-D-galactosyl-(1,3)-1D-myo-inositol + UDP.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0013s00730g 1 176 + 176 Gaps:23 50.15 337 69.82 5e-78 POPTRDRAFT_834449 galactinol synthase family protein
blastp_kegg lcl|cic:CICLE_v10021027mg 1 176 + 176 Gaps:23 50.15 337 68.64 3e-77 hypothetical protein
blastp_kegg lcl|cit:102616851 1 176 + 176 Gaps:23 50.15 337 68.64 3e-77 galactinol synthase 1-like
blastp_kegg lcl|fve:101294740 1 142 + 142 Gaps:8 44.51 337 74.00 4e-77 galactinol synthase 2-like
blastp_kegg lcl|pop:POPTR_0005s00850g 1 176 + 176 Gaps:23 50.60 334 67.46 2e-76 galactinol synthase family protein
blastp_kegg lcl|rcu:RCOM_1002420 1 176 + 176 Gaps:23 53.14 318 67.46 8e-76 hypothetical protein
blastp_kegg lcl|pop:POPTR_0013s00720g 1 176 + 176 Gaps:23 50.60 334 68.05 8e-76 POPTRDRAFT_893502 galactinol synthase family protein
blastp_kegg lcl|pxb:103961259 1 142 + 142 Gaps:8 45.87 327 74.00 8e-76 galactinol synthase 2
blastp_kegg lcl|pmum:103323231 1 152 + 152 Gaps:8 48.63 329 68.12 2e-75 galactinol synthase 2
blastp_kegg lcl|tcc:TCM_021437 1 162 + 162 Gaps:9 46.72 366 67.84 4e-75 Galactinol synthase 1
blastp_uniprot_sprot sp|Q9FXB2|GOLS2_ARATH 1 176 + 176 Gaps:24 50.75 335 67.65 3e-76 Galactinol synthase 2 OS Arabidopsis thaliana GN GOLS2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9XGN3|GOLS2_AJURE 1 217 + 217 Gaps:39 69.86 292 58.33 8e-73 Galactinol synthase 2 (Fragment) OS Ajuga reptans GN GOLS2 PE 1 SV 1
blastp_uniprot_sprot sp|C7G304|GOLS2_SOLLC 1 176 + 176 Gaps:23 50.00 338 63.31 4e-71 Galactinol synthase 2 OS Solanum lycopersicum GN GOLS2 PE 2 SV 1
blastp_uniprot_sprot sp|O22893|GOLS1_ARATH 1 142 + 142 Gaps:9 43.90 344 68.87 2e-70 Galactinol synthase 1 OS Arabidopsis thaliana GN GOLS1 PE 1 SV 1
blastp_uniprot_sprot sp|O80518|GOLS3_ARATH 1 176 + 176 Gaps:24 50.90 334 64.12 5e-70 Galactinol synthase 3 OS Arabidopsis thaliana GN GOLS3 PE 1 SV 1
blastp_uniprot_sprot sp|Q9XGN4|GOLS1_AJURE 1 176 + 176 Gaps:23 50.75 333 60.95 7e-70 Galactinol synthase 1 OS Ajuga reptans GN GOLS1 PE 1 SV 1
blastp_uniprot_sprot sp|O22693|GOLS4_ARATH 1 176 + 176 Gaps:24 50.90 334 61.18 2e-67 Galactinol synthase 4 OS Arabidopsis thaliana GN GOLS4 PE 2 SV 1
blastp_uniprot_sprot sp|Q8H1S1|GOLS6_ARATH 1 142 + 142 Gaps:9 44.94 336 64.24 3e-64 Galactinol synthase 6 OS Arabidopsis thaliana GN GOLS6 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FFA1|GOLS5_ARATH 1 142 + 142 Gaps:9 45.35 333 62.25 6e-62 Galactinol synthase 5 OS Arabidopsis thaliana GN GOLS5 PE 2 SV 1
blastp_uniprot_sprot sp|F4KED2|GOLSA_ARATH 1 150 + 150 Gaps:5 44.82 328 63.95 4e-60 Galactinol synthase 10 OS Arabidopsis thaliana GN GOLS10 PE 3 SV 1
rpsblast_cdd gnl|CDD|177771 1 142 + 142 Gaps:8 45.05 333 74.00 8e-83 PLN00176 PLN00176 galactinol synthase.
rpsblast_cdd gnl|CDD|133018 1 138 + 138 Gaps:44 48.33 240 36.21 2e-23 cd02537 GT8_Glycogenin Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases.
rpsblast_cdd gnl|CDD|201828 1 137 + 137 Gaps:31 55.65 248 29.71 2e-21 pfam01501 Glyco_transf_8 Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase lipopolysaccharide glucosyltransferase 1 and glycogenin glucosyltransferase.
rpsblast_cdd gnl|CDD|113488 138 240 + 103 Gaps:59 74.31 218 26.54 2e-14 pfam04720 DUF506 Protein of unknown function (DUF506). Family of uncharacterized plant proteins.
rpsblast_cdd gnl|CDD|162448 206 240 + 35 none 26.72 131 51.43 3e-09 TIGR01615 A_thal_3542 uncharacterized plant-specific domain TIGR01615. This model represents a domain found toward the C-terminus of a number of uncharacterized plant proteins. The domain is strongly conserved (greater than 30 % sequence identity between most pairs of members) but flanked by highly divergent regions including stretches of low-complexity sequence.
rpsblast_cdd gnl|CDD|133037 2 136 + 135 Gaps:40 56.85 248 24.82 1e-07 cd04194 GT8_A4GalT_like A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1 4-galactosyltransferase LOS-alpha-1 3-D-galactosyltransferase UDP-glucose:(galactosyl) LPS alpha1 2-glucosyltransferase UDP-galactose: (glucosyl) LPS alpha1 2-galactosyltransferase and UDP-glucose:(glucosyl) LPS alpha1 2-glucosyltransferase. Alpha-1 4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli the three alpha-1 2-glycosyltransferases that are involved in the synthesis of the outer core region of the LPS are all members of this family. The three enzymes share 40 % of sequence identity but have different sugar donor or acceptor specificities representing the structural diversity of LPS.
rpsblast_kog gnl|CDD|37161 1 167 + 167 Gaps:18 50.14 369 27.03 5e-27 KOG1950 KOG1950 KOG1950 Glycosyl transferase family 8 - glycogenin [Carbohydrate transport and metabolism].

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 60 138 79 PTHR11183:SF33 "KEGG:00052+2.4.1.123","MetaCyc:PWY-5337","MetaCyc:PWY-6524","MetaCyc:PWY-6525";signature_desc=GALACTINOL SYNTHASE 1-RELATED (PTHR11183:SF33) none IPR030515
Pfam 134 204 71 PF04720 none Protein of unknown function (DUF506) IPR006502
SUPERFAMILY 1 137 137 SSF53448 none none IPR029044
PANTHER 1 30 30 PTHR11183 none none IPR002495
Gene3D 66 142 77 G3DSA:3.90.550.10 none none IPR029044
Gene3D 1 33 33 G3DSA:3.90.550.10 none none IPR029044
PANTHER 60 138 79 PTHR11183 none none IPR002495
Pfam 1 137 137 PF01501 none Glycosyl transferase family 8 IPR002495
PANTHER 1 30 30 PTHR11183:SF33 "KEGG:00052+2.4.1.123","MetaCyc:PWY-5337","MetaCyc:PWY-6524","MetaCyc:PWY-6525";signature_desc=GALACTINOL SYNTHASE 1-RELATED (PTHR11183:SF33) none IPR030515

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Champenoux_2015_nSeqBC_A4 Qrob_Chr08 8 v_AD7YD13_501 s_1A7IED_780 43,44 43,42 43,99 lod 3.7 8.9

0 Targeting