Protein : Qrob_P0573800.2 Q. robur
Protein Identifier  ? Qrob_P0573800.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=7) K07904 - Ras-related protein Rab-11A Gene Prediction Quality  validated
Protein length 

Sequence

Length: 221  
Kegg Orthology  K07904
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

9 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0006913 nucleocytoplasmic transport The directed movement of molecules between the nucleus and the cytoplasm.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100246065 2 220 + 219 none 96.90 226 85.39 9e-138 ras-related protein RGP1-like
blastp_kegg lcl|pop:POPTR_0001s27690g 2 220 + 219 Gaps:1 96.89 225 87.16 2e-137 POPTRDRAFT_706462 GTP-binding family protein
blastp_kegg lcl|pda:103705373 1 220 + 220 Gaps:4 100.00 224 85.27 3e-137 ras-related protein RGP1
blastp_kegg lcl|tcc:TCM_005926 1 220 + 220 Gaps:4 99.56 225 86.61 9e-137 RAB GTPase A4C
blastp_kegg lcl|rcu:RCOM_1526030 2 219 + 218 Gaps:2 96.86 223 84.26 2e-134 protein with unknown function (EC:3.1.4.12)
blastp_kegg lcl|obr:102699429 6 220 + 215 Gaps:1 94.69 226 86.45 3e-134 ras-related protein RGP1-like
blastp_kegg lcl|cic:CICLE_v10005824mg 1 220 + 220 Gaps:4 100.00 224 82.14 2e-133 hypothetical protein
blastp_kegg lcl|cit:102607112 1 220 + 220 Gaps:4 100.00 224 82.14 2e-133 ras-related protein RABA4d-like
blastp_kegg lcl|cmo:103500306 1 220 + 220 Gaps:6 100.00 222 84.23 4e-133 ras-related protein RABA4c
blastp_kegg lcl|sbi:SORBI_02g018890 4 220 + 217 Gaps:1 95.58 226 84.72 4e-133 SORBIDRAFT_02g018890 Sb02g018890 hypothetical protein
blastp_pdb 2f9m_A 9 193 + 185 Gaps:1 93.47 199 68.28 2e-88 mol:protein length:199 RAB11B member RAS oncogene family
blastp_pdb 2f9l_A 9 193 + 185 Gaps:1 93.47 199 68.28 2e-88 mol:protein length:199 RAB11B member RAS oncogene family
blastp_pdb 1yzk_A 9 175 + 167 none 90.76 184 72.46 7e-86 mol:protein length:184 Ras-related protein Rab-11A
blastp_pdb 1oiv_B 1 173 + 173 none 90.58 191 69.36 1e-84 mol:protein length:191 RAS-RELATED PROTEIN RAB-11A
blastp_pdb 1oiv_A 1 173 + 173 none 90.58 191 69.36 1e-84 mol:protein length:191 RAS-RELATED PROTEIN RAB-11A
blastp_pdb 2hv8_C 9 175 + 167 none 97.09 172 71.86 1e-84 mol:protein length:172 Ras-related protein Rab-11A
blastp_pdb 2hv8_B 9 175 + 167 none 97.09 172 71.86 1e-84 mol:protein length:172 Ras-related protein Rab-11A
blastp_pdb 2hv8_A 9 175 + 167 none 97.09 172 71.86 1e-84 mol:protein length:172 Ras-related protein Rab-11A
blastp_pdb 2gzh_A 1 173 + 173 none 100.00 173 68.79 1e-83 mol:protein length:173 Ras-related protein Rab-11A
blastp_pdb 2gzd_B 1 173 + 173 none 100.00 173 68.79 1e-83 mol:protein length:173 Ras-related protein Rab-11A
blastp_uniprot_sprot sp|P25766|RLGP1_ORYSJ 6 220 + 215 Gaps:1 94.69 226 86.92 4e-136 Ras-related protein RGP1 OS Oryza sativa subsp. japonica GN RGP1 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FE79|RAA4C_ARATH 2 220 + 219 Gaps:2 97.31 223 81.57 6e-130 Ras-related protein RABA4c OS Arabidopsis thaliana GN RABA4C PE 2 SV 1
blastp_uniprot_sprot sp|Q9LH50|RAA4D_ARATH 1 218 + 218 Gaps:7 98.65 222 82.19 3e-129 Ras-related protein RABA4d OS Arabidopsis thaliana GN RABA4D PE 1 SV 1
blastp_uniprot_sprot sp|Q40191|RB11A_LOTJA 7 220 + 214 Gaps:1 94.25 226 78.40 6e-121 Ras-related protein Rab11A OS Lotus japonicus GN RAB11A PE 2 SV 1
blastp_uniprot_sprot sp|Q40522|RB11D_TOBAC 6 220 + 215 Gaps:2 95.95 222 77.46 3e-119 Ras-related protein Rab11D OS Nicotiana tabacum GN RAB11D PE 2 SV 1
blastp_uniprot_sprot sp|Q40520|RB11C_TOBAC 6 220 + 215 Gaps:2 95.95 222 76.53 3e-117 Ras-related protein Rab11C OS Nicotiana tabacum GN RAB11C PE 2 SV 1
blastp_uniprot_sprot sp|Q9FJN8|RAA4A_ARATH 6 220 + 215 Gaps:2 95.13 226 75.81 6e-116 Ras-related protein RABA4a OS Arabidopsis thaliana GN RABA4A PE 2 SV 1
blastp_uniprot_sprot sp|Q9SMQ6|RAA4B_ARATH 7 220 + 214 Gaps:3 94.20 224 71.09 7e-109 Ras-related protein RABA4b OS Arabidopsis thaliana GN RABA4B PE 2 SV 1
blastp_uniprot_sprot sp|Q40194|RB11D_LOTJA 9 220 + 212 Gaps:4 95.41 218 65.38 6e-96 Ras-related protein Rab11D OS Lotus japonicus GN RAB11D PE 2 SV 1
blastp_uniprot_sprot sp|Q9LK99|RAA1G_ARATH 9 220 + 212 Gaps:5 95.39 217 65.70 7e-95 Ras-related protein RABA1g OS Arabidopsis thaliana GN RABA1G PE 2 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 13 173 161 PF00071 none Ras family IPR001806
SMART 14 171 158 SM00174 "Reactome:REACT_11044" Rho (Ras homology) subfamily of Ras-like small GTPases IPR003578
SMART 9 175 167 SM00173 none Ras subfamily of RAS small GTPases IPR020849
PANTHER 4 218 215 PTHR24073 none none none
Gene3D 4 193 190 G3DSA:3.40.50.300 none none IPR027417
SMART 12 175 164 SM00175 none Rab subfamily of small GTPases IPR003579
ProSiteProfiles 7 218 212 PS51419 none small GTPase Rab1 family profile. none
SMART 1 177 177 SM00177 none ARF-like small GTPases IPR024156
SMART 17 211 195 SM00176 none Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases IPR002041
TIGRFAM 11 168 158 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
SUPERFAMILY 7 178 172 SSF52540 none none IPR027417
PRINTS 115 128 14 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 12 33 22 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 150 172 23 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 35 51 17 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 53 75 23 PR00449 none Transforming protein P21 ras signature IPR001806
PANTHER 4 218 215 PTHR24073:SF437 none none none

0 Localization

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4

0 Targeting