Protein : Qrob_P0570920.2 Q. robur
Protein Identifier  ? Qrob_P0570920.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR31852:SF7 - LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN (PTHR31852:SF7) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 185  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0009269 response to desiccation Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a desiccation stimulus, extreme dryness resulting from the prolonged deprivation of water.

13 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103328568 2 183 + 182 none 99.45 183 76.92 7e-95 uncharacterized LOC103328568
blastp_kegg lcl|rcu:RCOM_1281780 1 181 + 181 none 98.37 184 73.48 2e-94 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa021034mg 2 183 + 182 none 99.45 183 77.47 4e-94 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_011G095000g 2 184 + 183 none 98.39 186 77.05 4e-94 hypothetical protein
blastp_kegg lcl|tcc:TCM_041382 2 181 + 180 none 98.36 183 76.67 1e-93 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
blastp_kegg lcl|mdm:103424525 2 181 + 180 none 98.36 183 76.11 9e-91 uncharacterized LOC103424525
blastp_kegg lcl|fve:101301756 1 181 + 181 none 98.37 184 70.72 9e-91 uncharacterized protein LOC101301756
blastp_kegg lcl|cam:101493665 1 181 + 181 none 90.50 200 69.61 2e-90 uncharacterized LOC101493665
blastp_kegg lcl|cit:102622010 2 181 + 180 none 98.36 183 74.44 2e-89 uncharacterized LOC102622010
blastp_kegg lcl|pxb:103966392 2 181 + 180 none 98.36 183 75.00 6e-89 uncharacterized LOC103966392
rpsblast_cdd gnl|CDD|129008 53 140 + 88 Gaps:2 88.00 100 25.00 9e-15 smart00769 WHy Water Stress and Hypersensitive response.
rpsblast_cdd gnl|CDD|202564 60 149 + 90 Gaps:5 88.78 98 22.99 1e-08 pfam03168 LEA_2 Late embryogenesis abundant protein. Different types of LEA proteins are expressed at different stages of late embryogenesis in higher plant seed embryos and under conditions of dehydration stress. The function of these proteins is unknown. This family represents a group of LEA proteins that appear to be distinct from those in pfam02987. The family DUF1511 pfam07427 has now been merged into this family.
rpsblast_cdd gnl|CDD|178705 32 164 + 133 Gaps:9 63.01 219 27.54 3e-07 PLN03160 PLN03160 uncharacterized protein Provisional.

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 26 141 116 SSF117070 none none none
Pfam 60 162 103 PF03168 none Late embryogenesis abundant protein IPR004864
PANTHER 14 183 170 PTHR31852:SF7 none none none
SMART 41 154 114 SM00769 none Water Stress and Hypersensitive response IPR013990
Phobius 1 12 12 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 30 184 155 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 14 183 170 PTHR31852 none none none
Phobius 25 29 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 13 24 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 56 125 70 G3DSA:2.60.40.10 none none IPR013783
Phobius 1 29 29 SIGNAL_PEPTIDE none Signal peptide region none

3 Localization

Analysis Start End Length
SignalP_EUK 1 25 24
SignalP_GRAM_POSITIVE 1 22 21
SignalP_GRAM_NEGATIVE 1 23 22

10 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_rEpiBC_3P Qrob_Chr08 8 s_A9TNV_543 v_11837_70 9,93 9,83 11,15 lod 3.3 7.3
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting