Protein : Qrob_P0567690.2 Q. robur
Protein Identifier  ? Qrob_P0567690.2 Organism . Name  Quercus robur
Score  86.0 Score Type  egn
Protein Description  (M=1) K01338 - ATP-dependent Lon protease [EC:3.4.21.53] Code Enzyme  EC:3.4.21.53
Gene Prediction Quality  validated Protein length 

Sequence

Length: 985  
Kegg Orthology  K01338
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0006508 proteolysis The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO:0004252 serine-type endopeptidase activity Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine).
GO:0030163 protein catabolic process The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with or without the hydrolysis of peptide bonds.
GO:0004176 ATP-dependent peptidase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the hydrolysis of peptide bonds.
GO:0006515 misfolded or incompletely synthesized protein catabolic process The chemical reactions and pathways resulting in the breakdown of misfolded or attenuated proteins.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103933275 1 963 + 963 Gaps:15 93.33 900 90.60 0.0 lon protease homolog 2 peroxisomal-like
blastp_kegg lcl|tcc:TCM_015805 1 963 + 963 Gaps:3 93.24 888 88.41 0.0 Lon protease 2
blastp_kegg lcl|vvi:100262630 1 963 + 963 Gaps:3 93.24 888 89.98 0.0 lon protease homolog 2 peroxisomal-like
blastp_kegg lcl|rcu:RCOM_0520240 1 963 + 963 Gaps:11 93.26 890 89.16 0.0 ATP-dependent protease La putative (EC:3.4.21.53)
blastp_kegg lcl|pop:POPTR_0001s03160g 1 963 + 963 Gaps:6 93.28 893 87.64 0.0 Lon protease 1 family protein
blastp_kegg lcl|mdm:103411613 1 963 + 963 Gaps:3 93.24 888 91.43 0.0 lon protease homolog 2 peroxisomal-like
blastp_kegg lcl|pop:POPTR_0003s08420g 1 963 + 963 Gaps:6 93.28 893 88.36 0.0 Lon protease 1 family protein
blastp_kegg lcl|mdm:103436945 1 963 + 963 Gaps:3 93.24 888 91.30 0.0 lon protease homolog 2 peroxisomal
blastp_kegg lcl|cit:102615223 1 963 + 963 Gaps:11 93.23 886 89.83 0.0 lon protease homolog 2 peroxisomal-like
blastp_kegg lcl|pxb:103961077 1 963 + 963 Gaps:3 93.24 888 91.18 0.0 lon protease homolog 2 peroxisomal
blastp_pdb 3m6a_F 295 982 + 688 Gaps:62 92.63 543 50.50 1e-147 mol:protein length:543 ATP-dependent protease La 1
blastp_pdb 3m6a_E 295 982 + 688 Gaps:62 92.63 543 50.50 1e-147 mol:protein length:543 ATP-dependent protease La 1
blastp_pdb 3m6a_D 295 982 + 688 Gaps:62 92.63 543 50.50 1e-147 mol:protein length:543 ATP-dependent protease La 1
blastp_pdb 3m6a_C 295 982 + 688 Gaps:62 92.63 543 50.50 1e-147 mol:protein length:543 ATP-dependent protease La 1
blastp_pdb 3m6a_B 295 982 + 688 Gaps:62 92.63 543 50.50 1e-147 mol:protein length:543 ATP-dependent protease La 1
blastp_pdb 3m6a_A 295 982 + 688 Gaps:62 92.63 543 50.50 1e-147 mol:protein length:543 ATP-dependent protease La 1
blastp_pdb 1rre_F 832 963 + 132 Gaps:4 64.00 200 54.69 1e-35 mol:protein length:200 ATP-dependent protease La
blastp_pdb 1rre_E 832 963 + 132 Gaps:4 64.00 200 54.69 1e-35 mol:protein length:200 ATP-dependent protease La
blastp_pdb 1rre_D 832 963 + 132 Gaps:4 64.00 200 54.69 1e-35 mol:protein length:200 ATP-dependent protease La
blastp_pdb 1rre_C 832 963 + 132 Gaps:4 64.00 200 54.69 1e-35 mol:protein length:200 ATP-dependent protease La
blastp_uniprot_sprot sp|O04979|LONP2_SPIOL 1 963 + 963 Gaps:3 93.35 887 84.78 0.0 Lon protease homolog 2 peroxisomal OS Spinacia oleracea PE 2 SV 2
blastp_uniprot_sprot sp|O64948|LONP2_ARATH 1 982 + 982 Gaps:6 95.50 888 84.67 0.0 Lon protease homolog 2 peroxisomal OS Arabidopsis thaliana GN LON2 PE 2 SV 1
blastp_uniprot_sprot sp|Q0J032|LONP2_ORYSJ 4 963 + 960 Gaps:10 92.76 884 84.63 0.0 Lon protease homolog 2 peroxisomal OS Oryza sativa subsp. japonica GN Os09g0533400 PE 2 SV 1
blastp_uniprot_sprot sp|P93647|LONP2_MAIZE 1 963 + 963 Gaps:8 93.22 885 84.00 0.0 Lon protease homolog 2 peroxisomal OS Zea mays GN LON1 PE 2 SV 1
blastp_uniprot_sprot sp|B8BDV1|LONP2_ORYSI 4 963 + 960 Gaps:10 92.76 884 84.63 0.0 Lon protease homolog 2 peroxisomal OS Oryza sativa subsp. indica GN LON1 PE 2 SV 1
blastp_uniprot_sprot sp|Q2TAF8|LONP2_XENLA 4 984 + 981 Gaps:86 94.51 856 47.10 0.0 Lon protease homolog 2 peroxisomal OS Xenopus laevis GN lonp2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9DBN5|LONP2_MOUSE 5 963 + 959 Gaps:74 91.67 852 46.86 0.0 Lon protease homolog 2 peroxisomal OS Mus musculus GN Lonp2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5PQY6|LONP2_DANRE 5 963 + 959 Gaps:76 91.55 840 48.24 0.0 Lon protease homolog 2 peroxisomal OS Danio rerio GN lonp2 PE 2 SV 1
blastp_uniprot_sprot sp|Q3SX23|LONP2_BOVIN 5 962 + 958 Gaps:76 91.55 852 47.31 0.0 Lon protease homolog 2 peroxisomal OS Bos taurus GN LONP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q3MIB4|LONP2_RAT 5 963 + 959 Gaps:74 91.67 852 46.73 0.0 Lon protease homolog 2 peroxisomal OS Rattus norvegicus GN Lonp2 PE 1 SV 2

33 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 13 255 243 PF02190 none ATP-dependent protease La (LON) domain IPR003111
PANTHER 534 756 223 PTHR10046:SF24 none none none
PANTHER 795 963 169 PTHR10046:SF24 none none none
Pfam 538 675 138 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
Pfam 406 465 60 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
TIGRFAM 465 964 500 TIGR00763 none lon: endopeptidase La IPR004815
SMART 534 679 146 SM00382 none ATPases associated with a variety of cellular activities IPR003593
SMART 402 527 126 SM00382 none ATPases associated with a variety of cellular activities IPR003593
Gene3D 498 686 189 G3DSA:3.40.50.300 none none IPR027417
Gene3D 366 467 102 G3DSA:3.40.50.300 none none IPR027417
PANTHER 104 401 298 PTHR10046:SF24 none none none
SUPERFAMILY 354 468 115 SSF52540 none none IPR027417
SMART 10 255 246 SM00464 none Found in ATP-dependent protease La (LON) IPR003111
Pfam 805 965 161 PF05362 none Lon protease (S16) C-terminal proteolytic domain IPR008269
SUPERFAMILY 486 751 266 SSF52540 none none IPR027417
Gene3D 826 963 138 G3DSA:3.30.230.10 none none IPR014721
PANTHER 104 401 298 PTHR10046 none none IPR027065
SUPERFAMILY 11 67 57 SSF88697 none none IPR015947
SUPERFAMILY 107 254 148 SSF88697 none none IPR015947
PANTHER 1 70 70 PTHR10046 none none IPR027065
ProSitePatterns 916 924 9 PS01046 none ATP-dependent serine proteases, lon family, serine active site. IPR008268
Gene3D 798 819 22 G3DSA:1.10.8.60 none none none
Gene3D 687 749 63 G3DSA:1.10.8.60 none none none
SUPERFAMILY 831 963 133 SSF54211 none none IPR020568
PANTHER 534 756 223 PTHR10046 none none IPR027065
PANTHER 795 963 169 PTHR10046 none none IPR027065
Coils 290 311 22 Coil none none none
Hamap 3 984 982 MF_03121 none Lon protease homolog 2, peroxisomal [LONP2]. IPR027501
PANTHER 1 70 70 PTHR10046:SF24 none none none
PRINTS 831 847 17 PR00830 none Endopeptidase La (Lon) serine protease (S16) signature none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting