Protein : Qrob_P0565250.2 Q. robur
Protein Identifier  ? Qrob_P0565250.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) K12486 - stromal membrane-associated protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 461  
Kegg Orthology  K12486
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005096 GTPase activator activity Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100854573 1 459 + 459 Gaps:61 99.80 507 55.34 0.0 probable ADP-ribosylation factor GTPase-activating protein AGD5-like
blastp_kegg lcl|vvi:100262374 1 460 + 460 Gaps:37 100.00 475 55.58 5e-155 probable ADP-ribosylation factor GTPase-activating protein AGD5-like
blastp_kegg lcl|cit:102624081 1 459 + 459 Gaps:66 99.80 492 55.19 2e-153 probable ADP-ribosylation factor GTPase-activating protein AGD5-like
blastp_kegg lcl|rcu:RCOM_1062990 17 459 + 443 Gaps:18 95.81 454 57.01 2e-151 ARF GTPase activator putative
blastp_kegg lcl|cic:CICLE_v10015133mg 1 410 + 410 Gaps:55 95.11 470 57.49 3e-151 hypothetical protein
blastp_kegg lcl|pop:POPTR_0011s04390g 1 459 + 459 Gaps:62 99.79 476 55.16 1e-150 POPTRDRAFT_822795 hypothetical protein
blastp_kegg lcl|tcc:TCM_029970 1 459 + 459 Gaps:58 99.79 482 54.68 1e-150 ARF-GAP domain 5 putative isoform 1
blastp_kegg lcl|cit:102628167 1 459 + 459 Gaps:84 99.81 516 49.71 1e-149 probable ADP-ribosylation factor GTPase-activating protein AGD5-like
blastp_kegg lcl|pxb:103934428 1 460 + 460 Gaps:35 100.00 477 51.99 3e-149 probable ADP-ribosylation factor GTPase-activating protein AGD5
blastp_kegg lcl|fve:101312322 1 459 + 459 Gaps:40 99.79 476 54.11 1e-146 probable ADP-ribosylation factor GTPase-activating protein AGD5-like
blastp_pdb 2iqj_B 19 113 + 95 Gaps:10 69.40 134 52.69 5e-26 mol:protein length:134 Stromal membrane-associated protein 1-like
blastp_pdb 2iqj_A 19 113 + 95 Gaps:10 69.40 134 52.69 5e-26 mol:protein length:134 Stromal membrane-associated protein 1-like
blastp_pdb 2crr_A 7 96 + 90 Gaps:10 70.92 141 50.00 1e-23 mol:protein length:141 Stromal membrane-associated protein SMAP1B
blastp_pdb 3jue_B 20 113 + 94 Gaps:2 26.09 368 45.83 2e-19 mol:protein length:368 ARFGAP with coiled-coil ANK repeat and PH do
blastp_pdb 3jue_A 20 113 + 94 Gaps:2 26.09 368 45.83 2e-19 mol:protein length:368 ARFGAP with coiled-coil ANK repeat and PH do
blastp_pdb 3sub_B 21 104 + 84 Gaps:13 49.69 163 51.85 1e-16 mol:protein length:163 ADP-ribosylation factor GTPase-activating pro
blastp_pdb 3sub_A 21 104 + 84 Gaps:13 49.69 163 51.85 1e-16 mol:protein length:163 ADP-ribosylation factor GTPase-activating pro
blastp_pdb 1dcq_A 21 113 + 93 Gaps:14 34.17 278 40.00 3e-15 mol:protein length:278 PYK2-ASSOCIATED PROTEIN BETA
blastp_pdb 2b0o_H 21 113 + 93 Gaps:2 31.56 301 41.05 8e-15 mol:protein length:301 UPLC1
blastp_pdb 2b0o_G 21 113 + 93 Gaps:2 31.56 301 41.05 8e-15 mol:protein length:301 UPLC1
blastp_uniprot_sprot sp|Q9FL69|AGD5_ARATH 1 459 + 459 Gaps:55 99.79 483 48.55 8e-124 Probable ADP-ribosylation factor GTPase-activating protein AGD5 OS Arabidopsis thaliana GN AGD5 PE 1 SV 1
blastp_uniprot_sprot sp|Q0WQQ1|AGD15_ARATH 1 111 + 111 Gaps:24 53.02 232 63.41 2e-44 Probable ADP-ribosylation factor GTPase-activating protein AGD15 OS Arabidopsis thaliana GN AGD15 PE 2 SV 1
blastp_uniprot_sprot sp|Q5F413|SMAP2_CHICK 4 113 + 110 Gaps:16 26.64 428 47.37 1e-25 Stromal membrane-associated protein 2 OS Gallus gallus GN SMAP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q7TN29|SMAP2_MOUSE 19 174 + 156 Gaps:17 35.28 428 40.40 6e-25 Stromal membrane-associated protein 2 OS Mus musculus GN Smap2 PE 1 SV 1
blastp_uniprot_sprot sp|Q91VZ6|SMAP1_MOUSE 7 96 + 90 Gaps:10 22.73 440 51.00 9e-25 Stromal membrane-associated protein 1 OS Mus musculus GN Smap1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8WU79|SMAP2_HUMAN 19 113 + 95 Gaps:10 21.68 429 52.69 9e-25 Stromal membrane-associated protein 2 OS Homo sapiens GN SMAP2 PE 1 SV 1
blastp_uniprot_sprot sp|Q5EA00|SMAP2_BOVIN 19 113 + 95 Gaps:10 21.68 429 52.69 9e-25 Stromal membrane-associated protein 2 OS Bos taurus GN SMAP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8IYB5|SMAP1_HUMAN 7 96 + 90 Gaps:10 21.41 467 50.00 1e-23 Stromal membrane-associated protein 1 OS Homo sapiens GN SMAP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9UT34|YIQ9_SCHPO 10 111 + 102 Gaps:12 30.63 320 48.98 2e-23 Uncharacterized protein C824.09c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC824.09c PE 4 SV 1
blastp_uniprot_sprot sp|Q15057|ACAP2_HUMAN 21 136 + 116 Gaps:18 16.20 778 45.24 6e-22 Arf-GAP with coiled-coil ANK repeat and PH domain-containing protein 2 OS Homo sapiens GN ACAP2 PE 1 SV 3

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 50 71 22 PR00405 none HIV Rev interacting protein signature IPR001164
PRINTS 29 46 18 PR00405 none HIV Rev interacting protein signature IPR001164
PRINTS 10 29 20 PR00405 none HIV Rev interacting protein signature IPR001164
PANTHER 444 460 17 PTHR23180 none none none
PANTHER 6 141 136 PTHR23180 none none none
SUPERFAMILY 19 112 94 SSF57863 none none none
PANTHER 185 227 43 PTHR23180 none none none
Pfam 19 113 95 PF01412 none Putative GTPase activating protein for Arf IPR001164
PANTHER 185 227 43 PTHR23180:SF204 none none none
PANTHER 6 141 136 PTHR23180:SF204 none none none
SMART 5 118 114 SM00105 none Putative GTP-ase activating proteins for the small GTPase, ARF IPR001164
ProSiteProfiles 1 118 118 PS50115 none ARF GTPase-activating proteins domain profile. IPR001164
PANTHER 444 460 17 PTHR23180:SF204 none none none

0 Localization

19 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7

0 Targeting