Protein : Qrob_P0564280.2 Q. robur
Protein Identifier  ? Qrob_P0564280.2 Organism . Name  Quercus robur
Score  94.0 Score Type  egn
Protein Description  (M=2) K03189 - urease accessory protein Gene Prediction Quality  validated
Protein length 

Sequence

Length: 316  
Kegg Orthology  K03189
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0016151 nickel cation binding Interacting selectively and non-covalently with nickel (Ni) cations.
GO:0006807 nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102620030 36 315 + 280 Gaps:22 91.17 283 90.70 4e-170 urease accessory protein G-like
blastp_kegg lcl|mdm:103434991 42 315 + 274 Gaps:22 91.64 275 94.05 2e-169 urease accessory protein G
blastp_kegg lcl|pmum:103325110 42 315 + 274 Gaps:22 89.05 283 94.44 3e-168 urease accessory protein G
blastp_kegg lcl|rcu:RCOM_0633220 46 315 + 270 Gaps:22 90.18 275 93.95 3e-167 Urease accessory protein ureG putative
blastp_kegg lcl|pper:PRUPE_ppa009642mg 42 315 + 274 Gaps:22 89.05 283 93.65 5e-167 hypothetical protein
blastp_kegg lcl|fve:101296750 38 315 + 278 Gaps:23 92.45 278 92.61 1e-166 uncharacterized urease accessory protein ureG-like
blastp_kegg lcl|mdm:103446198 38 315 + 278 Gaps:23 91.79 280 91.83 2e-166 urease accessory protein G
blastp_kegg lcl|pxb:103951265 38 315 + 278 Gaps:23 91.79 280 91.44 3e-166 urease accessory protein G
blastp_kegg lcl|pop:POPTR_0002s24500g 44 315 + 272 Gaps:22 89.29 280 92.80 6e-166 POPTRDRAFT_645427 Ni-binding urease accessory protein UreG
blastp_kegg lcl|tcc:TCM_029508 43 314 + 272 Gaps:22 80.65 310 93.60 2e-164 Urease accessory protein G
blastp_pdb 2hf9_B 98 302 + 205 Gaps:35 76.99 226 36.78 6e-12 mol:protein length:226 Probable hydrogenase nickel incorporation pro
blastp_pdb 2hf9_A 98 302 + 205 Gaps:35 76.99 226 36.78 6e-12 mol:protein length:226 Probable hydrogenase nickel incorporation pro
blastp_pdb 2hf8_B 98 302 + 205 Gaps:35 76.99 226 36.78 6e-12 mol:protein length:226 Probable hydrogenase nickel incorporation pro
blastp_pdb 2hf8_A 98 302 + 205 Gaps:35 76.99 226 36.78 6e-12 mol:protein length:226 Probable hydrogenase nickel incorporation pro
blastp_pdb 2wsm_B 93 302 + 210 Gaps:35 80.09 221 31.64 5e-06 mol:protein length:221 HYDROGENASE EXPRESSION/FORMATION PROTEIN (HYP
blastp_pdb 2wsm_A 93 302 + 210 Gaps:35 80.09 221 31.64 5e-06 mol:protein length:221 HYDROGENASE EXPRESSION/FORMATION PROTEIN (HYP
blastp_uniprot_sprot sp|O64700|UREG_ARATH 38 315 + 278 Gaps:22 93.09 275 90.23 7e-164 Urease accessory protein G OS Arabidopsis thaliana GN UREG PE 2 SV 1
blastp_uniprot_sprot sp|E0ZS47|UREG_ORYSI 47 315 + 269 Gaps:22 86.97 284 90.28 3e-160 Urease accessory protein G OS Oryza sativa subsp. indica GN UREG PE 2 SV 1
blastp_uniprot_sprot sp|Q6AUF3|UREG_ORYSJ 47 315 + 269 Gaps:22 86.97 284 90.28 3e-159 Urease accessory protein G OS Oryza sativa subsp. japonica GN UREG PE 2 SV 1
blastp_uniprot_sprot sp|Q96WV0|UREG_SCHPO 64 313 + 250 Gaps:23 80.07 286 65.94 1e-94 Uncharacterized urease accessory protein ureG-like OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPCPB16A4.05c PE 3 SV 1
blastp_uniprot_sprot sp|A9GP90|UREG_SORC5 72 310 + 239 Gaps:23 71.52 302 69.91 2e-93 Urease accessory protein UreG OS Sorangium cellulosum (strain So ce56) GN ureG PE 3 SV 1
blastp_uniprot_sprot sp|A7HHN3|UREG_ANADF 72 311 + 240 Gaps:22 92.37 236 72.48 1e-91 Urease accessory protein UreG OS Anaeromyxobacter sp. (strain Fw109-5) GN ureG PE 3 SV 1
blastp_uniprot_sprot sp|Q11VN1|UREG_CYTH3 71 313 + 243 Gaps:23 90.98 244 64.41 3e-89 Urease accessory protein UreG OS Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) GN ureG PE 3 SV 1
blastp_uniprot_sprot sp|B8IJ81|UREG_METNO 92 308 + 217 Gaps:23 96.08 204 64.80 1e-78 Urease accessory protein UreG OS Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN ureG PE 3 SV 1
blastp_uniprot_sprot sp|A4VQW0|UREG_PSEU5 87 302 + 216 Gaps:23 95.59 204 63.59 2e-77 Urease accessory protein UreG OS Pseudomonas stutzeri (strain A1501) GN ureG PE 3 SV 1
blastp_uniprot_sprot sp|B1M3X4|UREG1_METRJ 94 308 + 215 Gaps:23 94.63 205 64.43 3e-77 Urease accessory protein UreG 1 OS Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN ureG1 PE 3 SV 1
rpsblast_cdd gnl|CDD|129208 94 302 + 209 Gaps:23 94.47 199 61.17 6e-70 TIGR00101 ureG urease accessory protein UreG. This model represents UreG a GTP hydrolase that acts in the assembly of the nickel metallocenter of urease. It is found only in urease-positive species although some urease-positive species (e.g. Bacillus subtilis) lack this protein. A similar protein hypB is an accessory protein for expression of hydrogenase which also uses nickel.
rpsblast_cdd gnl|CDD|30727 88 304 + 217 Gaps:32 93.56 202 49.21 2e-52 COG0378 HypB Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase [Posttranslational modification protein turnover chaperones / Transcription].
rpsblast_cdd gnl|CDD|202255 92 286 + 195 Gaps:45 100.00 178 34.27 1e-33 pfam02492 cobW CobW/HypB/UreG nucleotide-binding domain. This domain is found in HypB a hydrogenase expression / formation protein and UreG a urease accessory protein. Both these proteins contain a P-loop nucleotide binding motif. HypB has GTPase activity and is a guanine nucleotide binding protein. It is not known whether UreG binds GTP or some other nucleotide. Both enzymes are involved in nickel binding. HypB can store nickel and is required for nickel dependent hydrogenase expression. UreG is required for functional incorporation of the urease nickel metallocenter. GTP hydrolysis may required by these proteins for nickel incorporation into other nickel proteins. This family of domains also contains P47K a Pseudomonas chlororaphis protein needed for nitrile hydratase expression and the cobW gene product which may be involved in cobalamin biosynthesis in Pseudomonas denitrificans.
rpsblast_cdd gnl|CDD|188019 87 305 + 219 Gaps:40 90.87 208 32.28 6e-12 TIGR00073 hypB hydrogenase accessory protein HypB. A GTP hydrolase for assembly of nickel metallocenter of hydrogenase. A similar protein ureG is an accessory protein for urease which also uses nickel. hits scoring 75 and above are safe as orthologs.

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 90 305 216 G3DSA:3.40.50.300 none none IPR027417
Pfam 145 284 140 PF02492 none CobW/HypB/UreG, nucleotide-binding domain IPR003495
TIGRFAM 144 303 160 TIGR00101 none ureG: urease accessory protein UreG IPR004400
PANTHER 34 122 89 PTHR31715 none none IPR004400
PANTHER 145 310 166 PTHR31715 none none IPR004400
SUPERFAMILY 166 307 142 SSF52540 none none IPR027417
SUPERFAMILY 87 137 51 SSF52540 none none IPR027417
Hamap 90 309 220 MF_01389 none Urease accessory protein UreG [ureG]. IPR004400

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting