Protein : Qrob_P0564060.2 Q. robur
Protein Identifier  ? Qrob_P0564060.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) KOG2029 - Uncharacterized conserved protein [Function unknown]. Gene Prediction Quality  validated
Protein length 

Sequence

Length: 1229  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0016788 hydrolase activity, acting on ester bonds Catalysis of the hydrolysis of any ester bond.
GO:0006505 GPI anchor metabolic process The chemical reactions and pathways involving glycosylphosphatidylinositol anchors, molecular mechanisms for attaching membrane proteins to the lipid bilayer of cell membranes. Structurally they consist of a molecule of phosphatidylinositol to which is linked, via the C-6 hydroxyl of the inositol, a carbohydrate chain. This chain is in turn linked to the protein through an ethanolamine phosphate group, the amino group of which is in amide linkage with the C-terminal carboxyl of the protein chain, the phosphate group being esterified to the C-6 hydroxyl of the terminal mannose of the core carbohydrate chain.

16 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s03340g 1 1227 + 1227 Gaps:24 99.43 1220 70.98 0.0 hypothetical protein
blastp_kegg lcl|cit:102620625 1 1227 + 1227 Gaps:16 99.92 1224 71.46 0.0 uncharacterized LOC102620625
blastp_kegg lcl|fve:101293369 1 1223 + 1223 Gaps:55 99.09 1211 72.50 0.0 uncharacterized protein LOC101293369
blastp_kegg lcl|rcu:RCOM_1591490 1 1223 + 1223 Gaps:31 94.50 1272 71.30 0.0 ribonuclease p/mrp subunit putative
blastp_kegg lcl|pper:PRUPE_ppa000381mg 1 1228 + 1228 Gaps:29 99.76 1226 72.77 0.0 hypothetical protein
blastp_kegg lcl|pmum:103320289 1 1228 + 1228 Gaps:31 99.76 1226 72.12 0.0 uncharacterized LOC103320289
blastp_kegg lcl|mdm:103455991 1 1223 + 1223 Gaps:31 99.51 1222 71.30 0.0 uncharacterized LOC103455991
blastp_kegg lcl|vvi:100257358 1 1226 + 1226 Gaps:36 99.75 1221 70.53 0.0 uncharacterized LOC100257358
blastp_kegg lcl|gmx:100775692 1 1223 + 1223 Gaps:47 99.58 1203 70.37 0.0 uncharacterized LOC100775692
blastp_kegg lcl|cmo:103493525 1 1227 + 1227 Gaps:35 99.92 1217 70.64 0.0 uncharacterized LOC103493525
blastp_uniprot_sprot sp|Q2TBM9|SRAC1_BOVIN 945 1221 + 277 Gaps:21 41.28 654 39.63 9e-48 Protein SERAC1 OS Bos taurus GN SERAC1 PE 2 SV 1
blastp_uniprot_sprot sp|Q96JX3|SRAC1_HUMAN 940 1226 + 287 Gaps:21 42.81 654 37.14 3e-47 Protein SERAC1 OS Homo sapiens GN SERAC1 PE 1 SV 1
blastp_uniprot_sprot sp|Q3U213|SRAC1_MOUSE 966 1226 + 261 Gaps:17 39.14 654 38.28 2e-46 Protein SERAC1 OS Mus musculus GN Serac1 PE 2 SV 1
blastp_uniprot_sprot sp|Q5SNQ7|SRAC1_DANRE 966 1221 + 256 Gaps:19 38.45 658 38.34 2e-42 Protein SERAC1 OS Danio rerio GN serac1 PE 3 SV 1
blastp_uniprot_sprot sp|Q95JR3|SRAC1_MACFA 966 1060 + 95 Gaps:9 16.20 531 38.37 7e-10 Protein SERAC1 OS Macaca fascicularis GN SERAC1 PE 2 SV 1
rpsblast_kog gnl|CDD|37240 23 1224 + 1202 Gaps:316 98.42 697 46.94 2e-38 KOG2029 KOG2029 KOG2029 Uncharacterized conserved protein [Function unknown].

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 79 79 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 44 54 11 SSF101447 none none none
SUPERFAMILY 136 158 23 SSF101447 none none none
PANTHER 960 1228 269 PTHR22731 none none none
SUPERFAMILY 966 1209 244 SSF53474 none none IPR029058
Phobius 80 99 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 967 1092 126 PF07819 none PGAP1-like protein IPR012908
Phobius 100 1228 1129 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 1040 1116 77 G3DSA:3.40.50.1820 none none IPR029058
SUPERFAMILY 490 634 145 SSF48371 none none IPR016024
SUPERFAMILY 419 443 25 SSF48371 none none IPR016024
SUPERFAMILY 721 759 39 SSF48371 none none IPR016024
SUPERFAMILY 805 878 74 SSF48371 none none IPR016024

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 13 12

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting