Protein : Qrob_P0562340.2 Q. robur
Protein Identifier  ? Qrob_P0562340.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR11132//PTHR11132:SF26 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 336  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0015780 nucleotide-sugar transport The directed movement of nucleotide-sugars into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nucleotide-sugars are any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.
GO:0005338 nucleotide-sugar transmembrane transporter activity Enables the transfer of a nucleotide-sugar from one side of the membrane to the other. A nucleotide-sugar is any nucleotide in which the distal phosphoric residue of a nucleoside 5'-diphosphate is in glycosidic linkage with a monosaccharide or monosaccharide derivative.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103927894 1 335 + 335 Gaps:1 100.00 334 92.81 0.0 UDP-galactose transporter 2-like
blastp_kegg lcl|mdm:103448892 1 335 + 335 Gaps:1 100.00 334 92.81 0.0 UDP-galactose transporter 2
blastp_kegg lcl|tcc:TCM_035708 1 335 + 335 none 100.00 335 90.15 0.0 Nucleotide-sugar transporter family protein isoform 1
blastp_kegg lcl|vvi:100257791 1 335 + 335 none 99.41 337 88.36 0.0 UDP-galactose transporter 2-like
blastp_kegg lcl|pop:POPTR_0005s21850g 1 335 + 335 none 100.00 335 88.36 0.0 POPTRDRAFT_559417 transporter-related family protein
blastp_kegg lcl|mdm:103444683 1 335 + 335 Gaps:1 100.00 334 93.41 0.0 UDP-galactose transporter 2-like
blastp_kegg lcl|cmo:103496592 1 335 + 335 none 100.00 335 91.34 0.0 UDP-galactose transporter 2-like
blastp_kegg lcl|pxb:103929074 1 335 + 335 Gaps:1 100.00 334 93.41 0.0 UDP-galactose transporter 2
blastp_kegg lcl|pmum:103336222 1 335 + 335 Gaps:1 100.00 334 93.41 0.0 UDP-galactose transporter 2
blastp_kegg lcl|pper:PRUPE_ppa008384mg 1 335 + 335 Gaps:1 100.00 334 93.41 0.0 hypothetical protein
blastp_uniprot_sprot sp|Q9SRE4|UGAL2_ARATH 6 313 + 308 Gaps:13 91.93 347 52.04 9e-97 UDP-galactose transporter 2 OS Arabidopsis thaliana GN UDP-GALT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RXL8|Y1689_ARATH 32 325 + 294 Gaps:9 82.63 357 38.64 4e-59 Uncharacterized membrane protein At1g06890 OS Arabidopsis thaliana GN At1g06890 PE 1 SV 1
blastp_uniprot_sprot sp|Q1JQ66|S35E3_DANRE 16 312 + 297 Gaps:13 94.57 313 30.41 2e-25 Solute carrier family 35 member E3 OS Danio rerio GN slc35e3 PE 2 SV 1
blastp_uniprot_sprot sp|A4IFK2|S35E3_BOVIN 4 309 + 306 Gaps:9 98.08 313 30.94 4e-23 Solute carrier family 35 member E3 OS Bos taurus GN SLC35E3 PE 2 SV 1
blastp_uniprot_sprot sp|Q7Z769|S35E3_HUMAN 15 312 + 298 Gaps:7 94.89 313 29.29 1e-21 Solute carrier family 35 member E3 OS Homo sapiens GN SLC35E3 PE 2 SV 1
blastp_uniprot_sprot sp|Q6PGC7|S35E3_MOUSE 4 309 + 306 Gaps:9 98.08 313 29.32 2e-21 Solute carrier family 35 member E3 OS Mus musculus GN Slc35e3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C521|UGAL1_ARATH 18 335 + 318 Gaps:30 95.24 336 25.62 2e-10 UDP-galactose transporter 1 OS Arabidopsis thaliana GN UDP-GALT1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SS40|PT310_ARATH 24 303 + 280 Gaps:28 80.56 355 24.83 1e-09 Probable sugar phosphate/phosphate translocator At3g10290 OS Arabidopsis thaliana GN At3g10290 PE 3 SV 1
blastp_uniprot_sprot sp|Q6DBP3|PT505_ARATH 24 303 + 280 Gaps:14 92.56 309 24.13 2e-09 Probable sugar phosphate/phosphate translocator At5g05820 OS Arabidopsis thaliana GN At5g05820 PE 2 SV 1
blastp_uniprot_sprot sp|Q5XF09|PT311_ARATH 24 303 + 280 Gaps:14 92.86 308 24.13 5e-09 Probable sugar phosphate/phosphate translocator At3g11320 OS Arabidopsis thaliana GN At3g11320 PE 2 SV 1
rpsblast_cdd gnl|CDD|202556 156 299 + 144 Gaps:7 100.00 149 25.50 7e-25 pfam03151 TPT Triose-phosphate Transporter family. This family includes transporters with a specificity for triose phosphate.
rpsblast_kog gnl|CDD|36654 1 308 + 308 Gaps:12 98.73 316 36.86 4e-60 KOG1441 KOG1441 KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism Amino acid transport and metabolism].
rpsblast_kog gnl|CDD|36657 23 303 + 281 Gaps:18 90.13 314 24.73 4e-16 KOG1444 KOG1444 KOG1444 Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism Posttranslational modification protein turnover chaperones Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|36656 25 299 + 275 Gaps:21 82.52 349 21.18 2e-07 KOG1443 KOG1443 KOG1443 Predicted integral membrane protein [Function unknown].

24 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 188 211 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 11 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 43 66 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 97 101 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 276 280 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 12 31 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 122 132 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 102 121 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 281 300 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 152 156 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 301 335 35 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 242 252 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 157 176 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 177 187 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 253 275 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 133 151 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 156 298 143 PF03151 none Triose-phosphate Transporter family IPR004853
Phobius 223 241 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 11 312 302 PTHR11132:SF26 none none IPR031089
Phobius 78 96 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 32 42 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 67 77 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 11 312 302 PTHR11132 none none none
Phobius 212 222 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

9 Localization

Analysis Start End Length
TMHMM 278 300 22
TMHMM 157 174 17
TMHMM 181 203 22
TMHMM 81 103 22
TMHMM 133 152 19
TMHMM 223 245 22
TMHMM 15 32 17
TMHMM 252 274 22
TMHMM 39 61 22

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting