Protein : Qrob_P0560600.2 Q. robur
Protein Identifier  ? Qrob_P0560600.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=25) 3.1.3.2 - Acid phosphatase. Code Enzyme  EC:3.1.3.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 212  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0003993 acid phosphatase activity Catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an acid pH optimum.

20 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pxb:103959796 1 207 + 207 none 77.82 266 69.57 5e-107 acid phosphatase 1-like
blastp_kegg lcl|mdm:103439593 1 207 + 207 none 77.82 266 69.08 2e-106 acid phosphatase 1
blastp_kegg lcl|pxb:103961920 1 207 + 207 none 77.82 266 69.08 1e-105 acid phosphatase 1-like
blastp_kegg lcl|pper:PRUPE_ppa010063mg 1 207 + 207 none 77.82 266 65.70 2e-102 hypothetical protein
blastp_kegg lcl|pmum:103333386 1 207 + 207 none 77.82 266 65.70 7e-102 acid phosphatase 1
blastp_kegg lcl|mdm:103430929 1 207 + 207 none 77.82 266 67.15 7e-102 acid phosphatase 1-like
blastp_kegg lcl|pxb:103952755 1 207 + 207 none 77.82 266 66.18 1e-101 acid phosphatase 1
blastp_kegg lcl|cit:102621830 1 207 + 207 Gaps:7 74.83 286 67.29 2e-101 acid phosphatase 1-like
blastp_kegg lcl|cic:CICLE_v10005566mg 1 207 + 207 Gaps:7 74.83 286 66.36 5e-100 hypothetical protein
blastp_kegg lcl|tcc:TCM_014866 19 207 + 189 none 71.05 266 70.37 9e-99 HAD superfamily subfamily IIIB acid phosphatase
blastp_uniprot_sprot sp|P27061|PPA1_SOLLC 4 207 + 204 Gaps:8 76.86 255 67.35 8e-93 Acid phosphatase 1 OS Solanum lycopersicum GN APS1 PE 2 SV 1
blastp_uniprot_sprot sp|P15490|VSPA_SOYBN 35 207 + 173 Gaps:4 66.54 254 42.60 9e-43 Stem 28 kDa glycoprotein OS Glycine max GN VSPA PE 2 SV 1
blastp_uniprot_sprot sp|P10742|S25K_SOYBN 35 207 + 173 Gaps:4 58.08 291 42.60 2e-42 Stem 31 kDa glycoprotein (Fragment) OS Glycine max GN VSP25 PE 2 SV 2
blastp_uniprot_sprot sp|P10743|VSPB_SOYBN 35 207 + 173 Gaps:4 66.54 254 42.60 3e-42 Stem 31 kDa glycoprotein OS Glycine max GN VSPB PE 2 SV 1
blastp_uniprot_sprot sp|O49195|VSP1_ARATH 53 207 + 155 Gaps:2 58.15 270 39.49 1e-33 Vegetative storage protein 1 OS Arabidopsis thaliana GN VSP1 PE 1 SV 2
blastp_uniprot_sprot sp|O82122|VSP2_ARATH 53 207 + 155 Gaps:2 59.25 265 38.85 2e-33 Vegetative storage protein 2 OS Arabidopsis thaliana GN VSP2 PE 1 SV 1
blastp_uniprot_sprot sp|O04195|Y2992_ARATH 2 210 + 209 Gaps:31 63.60 283 29.44 4e-08 Uncharacterized protein At2g39920 OS Arabidopsis thaliana GN At2g39920 PE 2 SV 2
rpsblast_cdd gnl|CDD|130736 30 207 + 178 Gaps:8 74.24 229 50.00 4e-60 TIGR01675 plant-AP plant acid phosphatase. This model represents a family of acid phosphatase from plants which are most closely related to the (so called) class B non-specific acid phosphatase OlpA (TIGR01533 which is believed to be a 5'-nucleotide phosphatase) and somewhat more distantly to another class B phosphatase AphA (TIGR01672). Together these three clades define a subfamily (pfam03767) which corresponds to the IIIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate nucleophile hydrolases. It has been reported that the best substrate for this enzyme that could be found was purine 5'-nucleoside phosphates. This is in concordance with the assignment of the H. influenzae hel protein (from TIGR01533) as a 5'-nucleotidase however there is presently no other evidence to support this specific function for these plant phosphatases. Many genes from this family have been annotated as vegetative storage proteins due to their close homology with these earlier-characterized gene products which are highly expressed in leaves. There are significant differences however including expression levels and distribution. The most important difference is the lack in authentic VSPs of the nucleophilic aspartate residue which is instead replaced by serine glycine or asparagine. Thus these proteins can not be expected to be active phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists however that some members of this family may while containing all of the conserved HAD-superfamily catalytic residues lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
rpsblast_cdd gnl|CDD|202762 55 207 + 153 none 71.83 213 52.94 8e-53 pfam03767 Acid_phosphat_B HAD superfamily subfamily IIIB (Acid phosphatase). This family proteins includes acid phosphatases and a number of vegetative storage proteins.
rpsblast_cdd gnl|CDD|130741 35 207 + 173 Gaps:3 62.55 275 38.95 5e-36 TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675) are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus thus they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 19 211 193 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 2 13 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Pfam 42 208 167 PF03767 none HAD superfamily, subfamily IIIB (Acid phosphatase) IPR005519
SUPERFAMILY 108 205 98 SSF56784 none none IPR023214
PANTHER 1 210 210 PTHR31284:SF6 none none none
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 108 204 97 G3DSA:3.40.50.1000 none none IPR023214
PIRSF 1 210 210 PIRSF002674 none none IPR014403
PANTHER 1 210 210 PTHR31284 none none none
Phobius 14 18 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 18 18 SIGNAL_PEPTIDE none Signal peptide region none

2 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 16 15
SignalP_EUK 1 18 17

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

0 Targeting