Protein : Qrob_P0559860.2 Q. robur
Protein Identifier  ? Qrob_P0559860.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR12815//PTHR12815:SF9 - SORTING AND ASSEMBLY MACHINERY (SAM50) PROTEIN // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 815  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated.
GO:0019867 outer membrane The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites.

26 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_041787 1 814 + 814 Gaps:13 100.00 813 81.43 0.0 Translocon at the outer envelope membrane of chloroplasts 75-III
blastp_kegg lcl|rcu:RCOM_0734280 1 814 + 814 Gaps:15 100.00 815 80.61 0.0 sorting and assembly machinery (sam50) protein putative
blastp_kegg lcl|mdm:103420495 1 814 + 814 Gaps:9 100.00 811 79.78 0.0 protein TOC75-3 chloroplastic-like
blastp_kegg lcl|pxb:103954268 1 814 + 814 Gaps:19 100.00 811 81.13 0.0 protein TOC75-3 chloroplastic-like
blastp_kegg lcl|pxb:103964695 1 814 + 814 Gaps:19 100.00 811 80.64 0.0 protein TOC75-3 chloroplastic
blastp_kegg lcl|pop:POPTR_0001s12500g 3 814 + 812 Gaps:14 99.88 813 79.93 0.0 POPTRDRAFT_1066343 outer membrane family protein
blastp_kegg lcl|fve:101314762 23 814 + 792 Gaps:20 93.02 845 81.93 0.0 protein TOC75-3 chloroplastic-like
blastp_kegg lcl|mdm:103429913 1 814 + 814 Gaps:15 100.00 813 79.83 0.0 protein TOC75-3 chloroplastic-like
blastp_kegg lcl|eus:EUTSA_v10002403mg 22 814 + 793 Gaps:16 96.94 818 81.08 0.0 hypothetical protein
blastp_kegg lcl|mdm:103447509 1 814 + 814 Gaps:15 100.00 815 80.61 0.0 protein TOC75-3 chloroplastic
blastp_pdb 2x8x_X 189 427 + 239 Gaps:47 82.55 235 30.93 3e-10 mol:protein length:235 TLR1789 PROTEIN
blastp_pdb 3mc9_B 168 424 + 257 Gaps:48 71.20 316 28.44 2e-09 mol:protein length:316 Alr2269 protein
blastp_pdb 3mc9_A 168 424 + 257 Gaps:48 71.20 316 28.44 2e-09 mol:protein length:316 Alr2269 protein
blastp_pdb 3mc8_A 168 424 + 257 Gaps:48 71.20 316 28.44 2e-09 mol:protein length:316 Alr2269 protein
blastp_uniprot_sprot sp|Q9STE8|TC753_ARATH 125 814 + 690 none 84.35 818 87.39 0.0 Protein TOC75-3 chloroplastic OS Arabidopsis thaliana GN TOC75-3 PE 1 SV 1
blastp_uniprot_sprot sp|Q43715|TOC75_PEA 15 814 + 800 Gaps:17 98.76 809 76.72 0.0 Protein TOC75 chloroplastic OS Pisum sativum GN TOC75 PE 1 SV 1
blastp_uniprot_sprot sp|Q84Q83|TOC75_ORYSJ 124 814 + 691 Gaps:4 85.07 817 70.94 0.0 Protein TOC75 chloroplastic OS Oryza sativa subsp. japonica GN TOC75 PE 2 SV 2
blastp_uniprot_sprot sp|Q5IZC8|TC754_ARATH 402 814 + 413 Gaps:21 100.00 396 65.15 2e-170 Protein TOC75-4 chloroplastic OS Arabidopsis thaliana GN TOC75-4 PE 2 SV 1
blastp_uniprot_sprot sp|A2X208|OEP80_ORYSI 248 811 + 564 Gaps:76 78.50 665 27.97 1e-26 Outer envelope protein 80 chloroplastic OS Oryza sativa subsp. indica GN OEP80 PE 3 SV 1
blastp_uniprot_sprot sp|Q9C5J8|OEP80_ARATH 248 811 + 564 Gaps:73 71.17 732 27.64 4e-24 Outer envelope protein 80 chloroplastic OS Arabidopsis thaliana GN OEP80 PE 1 SV 1
blastp_uniprot_sprot sp|Q6H7M7|OEP80_ORYSJ 248 770 + 523 Gaps:75 72.18 665 27.50 6e-22 Outer envelope protein 80 chloroplastic OS Oryza sativa subsp. japonica GN OEP80 PE 3 SV 2
rpsblast_cdd gnl|CDD|178683 1 814 + 814 Gaps:24 99.25 796 77.97 0.0 PLN03138 PLN03138 Protein TOC75 Provisional.
rpsblast_cdd gnl|CDD|130065 95 814 + 720 Gaps:2 100.00 718 77.99 0.0 TIGR00992 3a0901s03IAP75 chloroplast envelope protein translocase IAP75 family. Two families of proteins are involved in the chloroplast envelope import appartus.They are the three proteins of the outer membrane (TOC) and four proteins in the inner membrane (TIC). This family is specific for the TOC IAP75 protein.
rpsblast_cdd gnl|CDD|144626 482 814 + 333 Gaps:58 100.00 317 22.71 9e-30 pfam01103 Bac_surface_Ag Surface antigen. This entry includes the following surface antigens D15 antigen from H.influenzae OMA87 from P.multocida OMP85 from N.meningitidis and N.gonorrhoeae. The family also includes a number of eukaryotic proteins that are members of the UPF0140 family. There also appears to be a relationship to pfam03865 (personal obs: C Yeats). In eukaryotes it appears that these proteins are not surface antigens S. cerevisiae YNL026W (SAM50) is an essential component of the Sorting and Assembly Machinery (SAM) of the mitochondrial outer membrane. The protein was localised to the mitochondria.
rpsblast_cdd gnl|CDD|34388 313 814 + 502 Gaps:70 62.40 766 20.50 5e-23 COG4775 COG4775 Outer membrane protein/protective antigen OMA87 [Cell envelope biogenesis outer membrane].
rpsblast_cdd gnl|CDD|200260 305 728 + 424 Gaps:98 50.74 741 25.27 3e-09 TIGR03303 OM_YaeT outer membrane protein assembly complex YaeT protein. Members of this protein family are the YaeT protein of the YaeT/YfiO complex for assembling proteins into the outer membrane of Gram-negative bacteria. This protein is similar in sequence and function to a non-essential paralog YtfM that is also in the Omp85 family. Members of this family typically have five tandem copies of the surface antigen variable number repeat (pfam07244) followed by an outer membrane beta-barrel domain (pfam01103) while the YtfM family typically has a single pfam07244 repeat.

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 689 790 102 G3DSA:2.40.160.50 none none none
Pfam 482 814 333 PF01103 none Surface antigen IPR000184
PANTHER 17 228 212 PTHR12815:SF9 none none none
PANTHER 17 228 212 PTHR12815 none none none
PANTHER 270 814 545 PTHR12815 none none none
Pfam 377 443 67 PF07244 none Surface antigen variable number repeat IPR010827
Pfam 184 241 58 PF07244 none Surface antigen variable number repeat IPR010827
TIGRFAM 98 814 717 TIGR00992 none 3a0901s03IAP75: chloroplast envelope protein translocase, IAP75 family IPR005689
PANTHER 270 814 545 PTHR12815:SF9 none none none

0 Localization

0 Qtllist

0 Targeting