Protein : Qrob_P0559170.2 Q. robur
Protein Identifier  ? Qrob_P0559170.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PF00644//PF02037//PF02877//PF05406 - Poly(ADP-ribose) polymerase catalytic domain // SAP domain // Poly(ADP-ribose) polymerase, regulatory domain // WGR domain Code Enzyme  EC:2.4.2.30
Gene Prediction Quality  validated Protein length 

Sequence

Length: 630  
Kegg Orthology  K10798
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003950 NAD+ ADP-ribosyltransferase activity Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.
GO:0006471 protein ADP-ribosylation The transfer, from NAD, of ADP-ribose to protein amino acids.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s12290g 5 629 + 625 Gaps:11 99.38 640 74.06 0.0 Poly [ADP-ribose] polymerase family protein
blastp_kegg lcl|pper:PRUPE_ppa002806mg 5 628 + 624 Gaps:18 99.52 631 75.32 0.0 hypothetical protein
blastp_kegg lcl|pmum:103342561 5 629 + 625 Gaps:20 99.37 631 75.12 0.0 poly [ADP-ribose] polymerase 2-like
blastp_kegg lcl|mdm:103419142 5 629 + 625 Gaps:18 99.37 639 72.60 0.0 poly [ADP-ribose] polymerase 2-like
blastp_kegg lcl|cic:CICLE_v10019312mg 6 629 + 624 Gaps:14 99.36 626 73.15 0.0 hypothetical protein
blastp_kegg lcl|cit:102609012 6 629 + 624 Gaps:15 99.36 627 73.19 0.0 poly [ADP-ribose] polymerase 2-like
blastp_kegg lcl|pxb:103928389 5 629 + 625 Gaps:25 99.37 636 72.31 0.0 poly [ADP-ribose] polymerase 2-like
blastp_kegg lcl|pda:103723208 5 629 + 625 Gaps:22 99.36 629 71.84 0.0 poly [ADP-ribose] polymerase 2
blastp_kegg lcl|pxb:103928406 7 629 + 623 Gaps:25 99.06 636 71.90 0.0 poly [ADP-ribose] polymerase 2-like
blastp_kegg lcl|pmum:103334060 5 629 + 625 Gaps:39 99.39 654 71.23 0.0 poly [ADP-ribose] polymerase 2
blastp_pdb 1gs0_B 280 628 + 349 Gaps:12 99.43 351 51.00 2e-111 mol:protein length:351 POLY (ADP-RIBOSE) POLYMERASE-2
blastp_pdb 1gs0_A 280 628 + 349 Gaps:12 99.43 351 51.00 2e-111 mol:protein length:351 POLY (ADP-RIBOSE) POLYMERASE-2
blastp_pdb 3kjd_B 283 628 + 346 Gaps:12 94.02 368 52.02 3e-108 mol:protein length:368 Poly [ADP-ribose] polymerase 2
blastp_pdb 3kjd_A 283 628 + 346 Gaps:12 94.02 368 52.02 3e-108 mol:protein length:368 Poly [ADP-ribose] polymerase 2
blastp_pdb 3kcz_B 283 628 + 346 Gaps:12 94.02 368 52.02 3e-108 mol:protein length:368 Poly [ADP-ribose] polymerase 2
blastp_pdb 3kcz_A 283 628 + 346 Gaps:12 94.02 368 52.02 3e-108 mol:protein length:368 Poly [ADP-ribose] polymerase 2
blastp_pdb 2rcw_A 280 629 + 350 Gaps:13 99.71 350 49.28 2e-105 mol:protein length:350 Poly [ADP-ribose] polymerase 1
blastp_pdb 1wok_D 280 629 + 350 Gaps:13 99.71 350 49.28 2e-105 mol:protein length:350 Poly [ADP-ribose] polymerase-1
blastp_pdb 1wok_C 280 629 + 350 Gaps:13 99.71 350 49.28 2e-105 mol:protein length:350 Poly [ADP-ribose] polymerase-1
blastp_pdb 1wok_B 280 629 + 350 Gaps:13 99.71 350 49.28 2e-105 mol:protein length:350 Poly [ADP-ribose] polymerase-1
blastp_uniprot_sprot sp|Q11207|PARP2_ARATH 4 629 + 626 Gaps:28 99.53 637 65.46 0.0 Poly [ADP-ribose] polymerase 2 OS Arabidopsis thaliana GN PARP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5Z8Q9|PRP2A_ORYSJ 5 629 + 625 Gaps:36 99.24 660 62.29 0.0 Poly [ADP-ribose] polymerase 2-A OS Oryza sativa subsp. japonica GN PARP2-A PE 3 SV 2
blastp_uniprot_sprot sp|O50017|PARP2_MAIZE 5 629 + 625 Gaps:35 99.23 653 62.81 0.0 Poly [ADP-ribose] polymerase 2 OS Zea mays GN PARP2 PE 2 SV 1
blastp_uniprot_sprot sp|Q0JMY1|PRP2B_ORYSJ 125 629 + 505 Gaps:37 79.67 605 69.29 0.0 Poly [ADP-ribose] polymerase 2-B OS Oryza sativa subsp. japonica GN PARP2-B PE 3 SV 2
blastp_uniprot_sprot sp|Q9UGN5|PARP2_HUMAN 108 628 + 521 Gaps:15 89.88 583 46.95 1e-145 Poly [ADP-ribose] polymerase 2 OS Homo sapiens GN PARP2 PE 1 SV 2
blastp_uniprot_sprot sp|O88554|PARP2_MOUSE 124 628 + 505 Gaps:21 90.16 559 47.62 6e-144 Poly [ADP-ribose] polymerase 2 OS Mus musculus GN Parp2 PE 1 SV 3
blastp_uniprot_sprot sp|P27008|PARP1_RAT 123 629 + 507 Gaps:30 49.41 1014 44.91 2e-123 Poly [ADP-ribose] polymerase 1 OS Rattus norvegicus GN Parp1 PE 1 SV 4
blastp_uniprot_sprot sp|P18493|PARP1_BOVIN 125 629 + 505 Gaps:32 49.11 1016 45.69 1e-122 Poly [ADP-ribose] polymerase 1 OS Bos taurus GN PARP1 PE 2 SV 2
blastp_uniprot_sprot sp|P31669|PARP1_XENLA 125 629 + 505 Gaps:18 50.00 998 44.09 2e-122 Poly [ADP-ribose] polymerase 1 (Fragment) OS Xenopus laevis GN parp1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9R152|PARP1_CRIGR 125 629 + 505 Gaps:32 49.26 1013 44.89 3e-121 Poly [ADP-ribose] polymerase 1 OS Cricetulus griseus GN PARP1 PE 2 SV 3

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 415 626 212 PF00644 none Poly(ADP-ribose) polymerase catalytic domain IPR012317
SUPERFAMILY 415 628 214 SSF56399 none none none
ProSiteProfiles 280 398 119 PS51060 none PARP alpha-helical domain profile. IPR004102
SUPERFAMILY 3 40 38 SSF68906 none none none
Gene3D 167 244 78 G3DSA:2.20.140.10 none none IPR008893
SMART 79 113 35 SM00513 none Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation IPR003034
SMART 3 37 35 SM00513 none Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation IPR003034
Pfam 281 413 133 PF02877 none Poly(ADP-ribose) polymerase, regulatory domain IPR004102
ProSiteProfiles 406 629 224 PS51059 none PARP catalytic domain profile. IPR012317
SMART 164 244 81 SM00773 none Proposed nucleic acid binding domain IPR008893
ProSiteProfiles 79 113 35 PS50800 none SAP motif profile. IPR003034
Gene3D 81 114 34 G3DSA:1.10.720.30 none none IPR003034
Gene3D 3 43 41 G3DSA:1.10.720.30 none none IPR003034
SUPERFAMILY 133 255 123 SSF142921 none none IPR008893
PANTHER 128 629 502 PTHR15447 none none none
Pfam 4 33 30 PF02037 none SAP domain IPR003034
Gene3D 418 627 210 G3DSA:3.90.228.10 none none IPR012317
ProSiteProfiles 3 37 35 PS50800 none SAP motif profile. IPR003034
Pfam 161 243 83 PF05406 none WGR domain IPR008893
SUPERFAMILY 281 413 133 SSF47587 none none IPR004102
Gene3D 246 415 170 G3DSA:1.20.142.10 none none IPR004102

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting