Protein : Qrob_P0558140.2 Q. robur
Protein Identifier  ? Qrob_P0558140.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Gene Prediction Quality  validated Protein length 

Sequence

Length: 180  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0045739 positive regulation of DNA repair Any process that activates or increases the frequency, rate or extent of DNA repair.
GO:0070531 BRCA1-A complex A protein complex that contains the BRCA1-BARD1 heterodimer, RAP80/UIMC1, BRCC3/BRCC36, BRE/BRCC45, FAM175A/CCDC98/Abraxas and MERIT40/NBA1, and specifically recognizes and binds K63-linked polyubiquitin chains present on histone H2A and H2AX at DNA damage sites.
GO:0070552 BRISC complex A protein complex that contains the FAM175B/ABRO1, BRCC3/BRCC36, BRE/BRCC45 and MERIT40/NBA1 proteins, and specifically cleaves K63-linked polyubiquitin chains.

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100260976 9 179 + 171 none 58.16 294 77.19 6e-96 uncharacterized LOC100260976
blastp_kegg lcl|cic:CICLE_v10009241mg 9 178 + 170 none 65.64 259 75.88 6e-94 hypothetical protein
blastp_kegg lcl|cit:102611871 9 178 + 170 none 65.64 259 75.29 3e-93 hypothetical protein
blastp_kegg lcl|pxb:103929649 9 178 + 170 none 64.89 262 75.29 6e-91 uncharacterized LOC103929649
blastp_kegg lcl|mdm:103421100 9 178 + 170 none 64.39 264 75.88 9e-91 uncharacterized LOC103421100
blastp_kegg lcl|mdm:103440997 9 178 + 170 none 64.39 264 75.88 9e-91 uncharacterized LOC103440997
blastp_kegg lcl|pmum:103320531 9 174 + 166 none 61.71 269 75.30 5e-90 uncharacterized LOC103320531
blastp_kegg lcl|cam:101514695 9 179 + 171 none 64.77 264 73.10 5e-90 uncharacterized LOC101514695
blastp_kegg lcl|pmum:103329952 9 179 + 171 none 63.81 268 73.10 1e-89 uncharacterized LOC103329952
blastp_kegg lcl|pper:PRUPE_ppa009983mg 9 174 + 166 none 61.71 269 74.70 3e-89 hypothetical protein

3 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 9 179 171 PTHR15660 none none IPR026126
ProSiteProfiles 1 33 33 PS51257 none Prokaryotic membrane lipoprotein lipid attachment site profile. none
PANTHER 9 179 171 PTHR15660:SF1 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting