Protein : Qrob_P0550990.2 Q. robur
Protein Identifier  ? Qrob_P0550990.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 4.6.1.12 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase. Code Enzyme  EC:4.6.1.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 238  
Kegg Orthology  K01770
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016114 terpenoid biosynthetic process The chemical reactions and pathways resulting in the formation of terpenoids, any member of a class of compounds characterized by an isoprenoid chemical structure.
GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity Catalysis of the reaction: 4-CDP-2-C-methyl-D-erythritol 2-phosphate = 2-C-methyl-D-erythritol 2,4-cyclic diphosphate + CMP.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103411737 4 237 + 234 Gaps:8 99.58 239 75.63 8e-119 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chloroplastic
blastp_kegg lcl|fve:101292211 2 237 + 236 Gaps:12 99.12 226 78.12 2e-118 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chloroplastic-like
blastp_kegg lcl|pop:POPTR_0001s09860g 5 237 + 233 Gaps:5 98.72 235 75.43 8e-118 POPTRDRAFT_180213 hypothetical protein
blastp_kegg lcl|pmum:103337568 4 237 + 234 Gaps:6 99.59 241 73.75 1e-116 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chloroplastic
blastp_kegg lcl|pper:PRUPE_ppa010644mg 4 237 + 234 Gaps:6 99.59 241 73.75 3e-116 hypothetical protein
blastp_kegg lcl|pop:POPTR_0003s13230g 54 237 + 184 none 78.97 233 86.41 3e-115 POPTRDRAFT_1074087 hypothetical protein
blastp_kegg lcl|aly:ARALYDRAFT_315035 37 237 + 201 Gaps:1 86.58 231 81.00 4e-115 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase
blastp_kegg lcl|sly:101246365 41 237 + 197 none 76.95 256 82.23 4e-114 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chloroplastic-like
blastp_kegg lcl|cit:102614336 16 237 + 222 Gaps:10 97.89 237 72.41 4e-114 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chloroplastic-like
blastp_kegg lcl|mdm:103439200 35 237 + 203 Gaps:3 85.83 240 79.13 9e-113 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chloroplastic-like
blastp_pdb 2pmp_A 78 237 + 160 none 100.00 160 91.25 2e-106 mol:protein length:160 2-C-methyl-D-erythritol 2 4-cyclodiphosphate
blastp_pdb 3qhd_C 71 237 + 167 Gaps:1 90.71 183 45.78 1e-47 mol:protein length:183 2-C-methyl-D-erythritol 2 4-cyclodiphosphate
blastp_pdb 3qhd_B 71 237 + 167 Gaps:1 90.71 183 45.78 1e-47 mol:protein length:183 2-C-methyl-D-erythritol 2 4-cyclodiphosphate
blastp_pdb 3qhd_A 71 237 + 167 Gaps:1 90.71 183 45.78 1e-47 mol:protein length:183 2-C-methyl-D-erythritol 2 4-cyclodiphosphate
blastp_pdb 3q8h_C 71 237 + 167 Gaps:1 90.71 183 45.78 1e-47 mol:protein length:183 2-C-methyl-D-erythritol 2 4-cyclodiphosphate
blastp_pdb 3q8h_B 71 237 + 167 Gaps:1 90.71 183 45.78 1e-47 mol:protein length:183 2-C-methyl-D-erythritol 2 4-cyclodiphosphate
blastp_pdb 3q8h_A 71 237 + 167 Gaps:1 90.71 183 45.78 1e-47 mol:protein length:183 2-C-methyl-D-erythritol 2 4-cyclodiphosphate
blastp_pdb 3p10_C 71 237 + 167 Gaps:1 90.71 183 45.78 1e-47 mol:protein length:183 2-C-methyl-D-erythritol 2 4-cyclodiphosphate
blastp_pdb 3p10_B 71 237 + 167 Gaps:1 90.71 183 45.78 1e-47 mol:protein length:183 2-C-methyl-D-erythritol 2 4-cyclodiphosphate
blastp_pdb 3p10_A 71 237 + 167 Gaps:1 90.71 183 45.78 1e-47 mol:protein length:183 2-C-methyl-D-erythritol 2 4-cyclodiphosphate
blastp_uniprot_sprot sp|Q9M4W3|ISPF_CATRO 74 237 + 164 none 69.49 236 93.29 5e-110 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chloroplastic OS Catharanthus roseus GN ISPF PE 2 SV 1
blastp_uniprot_sprot sp|Q9CAK8|ISPF_ARATH 43 237 + 195 Gaps:10 88.74 231 77.07 5e-108 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chloroplastic OS Arabidopsis thaliana GN ISPF PE 1 SV 1
blastp_uniprot_sprot sp|Q6EPN6|ISPF_ORYSJ 41 237 + 197 Gaps:3 87.39 222 78.87 2e-102 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase chloroplastic OS Oryza sativa subsp. japonica GN ISPF PE 2 SV 1
blastp_uniprot_sprot sp|Q1LLZ4|ISPF_RALME 80 237 + 158 Gaps:2 95.24 168 52.50 4e-51 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase OS Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN ispF PE 3 SV 1
blastp_uniprot_sprot sp|Q2KUX6|ISPF_BORA1 78 237 + 160 none 98.77 162 53.75 1e-50 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase OS Bordetella avium (strain 197N) GN ispF PE 3 SV 1
blastp_uniprot_sprot sp|A9II47|ISPF_BORPD 78 236 + 159 none 98.15 162 52.83 3e-50 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase OS Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN ispF PE 3 SV 1
blastp_uniprot_sprot sp|C5D3P3|ISPF_GEOSW 81 237 + 157 none 99.37 158 50.96 5e-50 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase OS Geobacillus sp. (strain WCH70) GN ispF PE 3 SV 1
blastp_uniprot_sprot sp|B2UFT6|ISPF_RALPJ 79 236 + 158 none 94.05 168 50.63 7e-50 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase OS Ralstonia pickettii (strain 12J) GN ispF PE 3 SV 1
blastp_uniprot_sprot sp|Q0KBM9|ISPF_CUPNH 79 236 + 158 Gaps:2 94.67 169 52.50 7e-50 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase OS Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN ispF PE 3 SV 1
blastp_uniprot_sprot sp|Q8XYW2|ISPF_RALSO 79 236 + 158 none 94.05 168 50.63 1e-49 2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase OS Ralstonia solanacearum (strain GMI1000) GN ispF PE 3 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 80 236 157 SSF69765 "KEGG:00900+4.6.1.12","MetaCyc:PWY-7560","UniPathway:UPA00056" none IPR003526
Phobius 14 21 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 80 237 158 PTHR32125:SF5 none none none
PANTHER 80 237 158 PTHR32125 none none none
Hamap 81 236 156 MF_00107 "KEGG:00900+4.6.1.12","MetaCyc:PWY-7560","UniPathway:UPA00056" 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. IPR003526
Phobius 2 13 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 79 236 158 G3DSA:3.30.1330.50 "KEGG:00900+4.6.1.12","MetaCyc:PWY-7560","UniPathway:UPA00056" none IPR003526
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
ProSitePatterns 115 130 16 PS01350 "KEGG:00900+4.6.1.12","MetaCyc:PWY-7560","UniPathway:UPA00056" 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. IPR020555
Phobius 22 237 216 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 81 236 156 PF02542 "KEGG:00900+4.6.1.12","MetaCyc:PWY-7560","UniPathway:UPA00056" YgbB family IPR003526
TIGRFAM 82 236 155 TIGR00151 "KEGG:00900+4.6.1.12","MetaCyc:PWY-7560","UniPathway:UPA00056" ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IPR003526

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 21 20

0 Qtllist

0 Targeting