Protein : Qrob_P0543860.2 Q. robur
Protein Identifier  ? Qrob_P0543860.2 Organism . Name  Quercus robur
Score  19.1 Score Type  egn
Protein Description  (M=2) PTHR10073:SF12 - DNA MISMATCH REPAIR PROTEIN MUTL Gene Prediction Quality  validated
Protein length 

Sequence

Length: 196  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006298 mismatch repair A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
GO:0032300 mismatch repair complex Any complex formed of proteins that act in mismatch repair.

19 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103319190 1 169 + 169 Gaps:2 22.81 732 83.23 6e-96 DNA mismatch repair protein MLH1
blastp_kegg lcl|pper:PRUPE_ppa002197mg 1 169 + 169 Gaps:2 23.79 702 82.63 2e-95 hypothetical protein
blastp_kegg lcl|mdm:103430252 1 169 + 169 Gaps:1 26.21 641 81.55 3e-95 DNA mismatch repair protein MLH1-like
blastp_kegg lcl|pxb:103961692 1 173 + 173 Gaps:1 23.53 731 79.65 1e-94 DNA mismatch repair protein MLH1
blastp_kegg lcl|pop:POPTR_0019s10740g 1 173 + 173 Gaps:3 22.76 747 77.65 2e-92 POPTRDRAFT_913572 hypothetical protein
blastp_kegg lcl|fve:101307597 1 169 + 169 Gaps:1 23.08 728 77.98 6e-92 DNA mismatch repair protein Mlh1-like
blastp_kegg lcl|tcc:TCM_036511 1 169 + 169 none 23.18 729 75.74 1e-90 MUTL isoform 1
blastp_kegg lcl|gmx:100794788 1 169 + 169 Gaps:2 22.97 727 80.24 3e-90 DNA mismatch repair protein MLH1-like
blastp_kegg lcl|cam:101503626 1 169 + 169 Gaps:2 23.23 719 80.84 5e-90 DNA mismatch repair protein MLH1-like
blastp_kegg lcl|pvu:PHAVU_005G0020000 1 167 + 167 Gaps:3 23.33 703 79.27 9e-87 hypothetical protein
blastp_pdb 3rbn_B 3 169 + 167 Gaps:34 46.83 284 33.08 2e-18 mol:protein length:284 DNA mismatch repair protein Mlh1
blastp_pdb 3rbn_A 3 169 + 167 Gaps:34 46.83 284 33.08 2e-18 mol:protein length:284 DNA mismatch repair protein Mlh1
blastp_uniprot_sprot sp|Q9ZRV4|MLH1_ARATH 1 169 + 169 Gaps:6 22.12 737 73.62 1e-84 DNA mismatch repair protein MLH1 OS Arabidopsis thaliana GN MLH1 PE 2 SV 1
blastp_uniprot_sprot sp|P40692|MLH1_HUMAN 4 169 + 166 Gaps:34 17.46 756 33.33 4e-17 DNA mismatch repair protein Mlh1 OS Homo sapiens GN MLH1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9JK91|MLH1_MOUSE 4 169 + 166 Gaps:34 17.37 760 34.09 1e-16 DNA mismatch repair protein Mlh1 OS Mus musculus GN Mlh1 PE 2 SV 2
blastp_uniprot_sprot sp|Q54KD8|MLH1_DICDI 3 169 + 167 Gaps:26 15.95 884 35.46 2e-16 DNA mismatch repair protein Mlh1 OS Dictyostelium discoideum GN mlh1 PE 3 SV 1
blastp_uniprot_sprot sp|P97679|MLH1_RAT 3 169 + 167 Gaps:35 17.44 757 31.06 5e-14 DNA mismatch repair protein Mlh1 OS Rattus norvegicus GN Mlh1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9P7W6|MLH1_SCHPO 3 79 + 77 Gaps:1 11.40 684 34.62 3e-06 Putative MutL protein homolog 1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN mlh1 PE 2 SV 1
rpsblast_kog gnl|CDD|37190 1 169 + 169 Gaps:41 18.44 694 42.19 1e-31 KOG1979 KOG1979 KOG1979 DNA mismatch repair protein - MLH1 family [Replication recombination and repair].

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 98 98 PTHR10073:SF12 none none IPR011186
PANTHER 124 168 45 PTHR10073 none none none
PANTHER 1 98 98 PTHR10073 none none none
PANTHER 124 168 45 PTHR10073:SF12 none none IPR011186

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting