Protein : Qrob_P0543810.2 Q. robur
Protein Identifier  ? Qrob_P0543810.2 Organism . Name  Quercus robur
Score  12.0 Score Type  egn
Protein Description  (M=1) K08734 - DNA mismatch repair protein MLH1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 240  
Kegg Orthology  K08734
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006298 mismatch repair A system for the correction of errors in which an incorrect base, which cannot form hydrogen bonds with the corresponding base in the parent strand, is incorporated into the daughter strand. The mismatch repair system promotes genomic fidelity by repairing base-base mismatches, insertion-deletion loops and heterologies generated during DNA replication and recombination.
GO:0032300 mismatch repair complex Any complex formed of proteins that act in mismatch repair.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100854779 37 239 + 203 Gaps:3 54.07 381 86.89 5e-126 DNA mismatch repair protein Mlh1-like
blastp_kegg lcl|rcu:RCOM_1331420 42 239 + 198 none 26.94 735 89.90 1e-121 DNA mismatch repair protein mlh1 putative
blastp_kegg lcl|pmum:103319190 41 239 + 199 none 27.19 732 89.45 2e-121 DNA mismatch repair protein MLH1
blastp_kegg lcl|fve:101307597 39 239 + 201 none 27.61 728 88.06 7e-121 DNA mismatch repair protein Mlh1-like
blastp_kegg lcl|pxb:103961692 41 239 + 199 none 27.22 731 88.94 3e-120 DNA mismatch repair protein MLH1
blastp_kegg lcl|pper:PRUPE_ppa002197mg 41 239 + 199 none 28.35 702 88.94 4e-120 hypothetical protein
blastp_kegg lcl|csv:101211816 29 239 + 211 Gaps:3 28.46 738 85.24 3e-119 DNA mismatch repair protein Mlh1-like
blastp_kegg lcl|cmo:103501309 29 239 + 211 Gaps:3 28.49 737 83.81 6e-118 DNA mismatch repair protein MLH1
blastp_kegg lcl|cit:102610589 37 239 + 203 none 27.62 735 84.73 6e-116 DNA mismatch repair protein MLH1-like
blastp_kegg lcl|cic:CICLE_v10019018mg 37 239 + 203 none 27.62 735 84.73 1e-115 hypothetical protein
blastp_pdb 3na3_A 49 239 + 191 none 54.89 348 58.12 1e-76 mol:protein length:348 DNA mismatch repair protein Mlh1
blastp_pdb 1b62_A 49 239 + 191 none 53.80 355 41.88 3e-45 mol:protein length:355 PROTEIN (MUTL)
blastp_pdb 1bkn_B 49 239 + 191 none 54.26 352 41.88 3e-45 mol:protein length:352 MUTL
blastp_pdb 1bkn_A 49 239 + 191 none 54.26 352 41.88 3e-45 mol:protein length:352 MUTL
blastp_pdb 1nhi_A 49 239 + 191 none 57.36 333 41.88 4e-45 mol:protein length:333 DNA mismatch repair protein mutL
blastp_pdb 1nhh_A 49 239 + 191 none 57.36 333 41.88 4e-45 mol:protein length:333 DNA mismatch repair protein mutL
blastp_pdb 1b63_A 49 239 + 191 none 57.36 333 41.88 4e-45 mol:protein length:333 MUTL
blastp_pdb 1nhj_A 49 239 + 191 none 57.36 333 41.36 2e-44 mol:protein length:333 DNA mismatch repair protein mutL
blastp_pdb 1h7u_B 45 226 + 182 Gaps:6 50.41 365 35.87 6e-28 mol:protein length:365 MISMATCH REPAIR ENDONUCLEASE PMS2
blastp_pdb 1h7u_A 45 226 + 182 Gaps:6 50.41 365 35.87 6e-28 mol:protein length:365 MISMATCH REPAIR ENDONUCLEASE PMS2
blastp_uniprot_sprot sp|Q9ZRV4|MLH1_ARATH 42 239 + 198 none 26.87 737 85.35 3e-114 DNA mismatch repair protein MLH1 OS Arabidopsis thaliana GN MLH1 PE 2 SV 1
blastp_uniprot_sprot sp|P40692|MLH1_HUMAN 49 239 + 191 none 25.26 756 58.12 1e-72 DNA mismatch repair protein Mlh1 OS Homo sapiens GN MLH1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9JK91|MLH1_MOUSE 49 239 + 191 none 25.13 760 58.64 6e-72 DNA mismatch repair protein Mlh1 OS Mus musculus GN Mlh1 PE 2 SV 2
blastp_uniprot_sprot sp|P97679|MLH1_RAT 49 239 + 191 none 25.23 757 56.54 2e-69 DNA mismatch repair protein Mlh1 OS Rattus norvegicus GN Mlh1 PE 2 SV 1
blastp_uniprot_sprot sp|Q54KD8|MLH1_DICDI 48 239 + 192 Gaps:8 22.62 884 51.00 2e-60 DNA mismatch repair protein Mlh1 OS Dictyostelium discoideum GN mlh1 PE 3 SV 1
blastp_uniprot_sprot sp|P38920|MLH1_YEAST 48 239 + 192 none 24.97 769 50.00 3e-59 DNA mismatch repair protein MLH1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN MLH1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9P7W6|MLH1_SCHPO 48 239 + 192 Gaps:7 29.09 684 49.25 1e-54 Putative MutL protein homolog 1 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN mlh1 PE 2 SV 1
blastp_uniprot_sprot sp|A9KE32|MUTL_COXBN 49 235 + 187 Gaps:3 32.40 574 46.77 4e-48 DNA mismatch repair protein MutL OS Coxiella burnetii (strain Dugway 5J108-111) GN mutL PE 3 SV 1
blastp_uniprot_sprot sp|Q83CM9|MUTL_COXBU 49 235 + 187 Gaps:3 32.40 574 46.77 4e-48 DNA mismatch repair protein MutL OS Coxiella burnetii (strain RSA 493 / Nine Mile phase I) GN mutL PE 3 SV 1
blastp_uniprot_sprot sp|A9NCK3|MUTL_COXBR 49 235 + 187 Gaps:3 32.40 574 46.77 4e-48 DNA mismatch repair protein MutL OS Coxiella burnetii (strain RSA 331 / Henzerling II) GN mutL PE 3 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 70 173 104 PF13589 none Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase none
PANTHER 47 237 191 PTHR10073 none none none
ProSitePatterns 139 145 7 PS00058 none DNA mismatch repair proteins mutL / hexB / PMS1 signature. IPR014762
Gene3D 48 237 190 G3DSA:3.30.565.10 none none IPR003594
SUPERFAMILY 47 236 190 SSF55874 none none IPR003594
PANTHER 47 237 191 PTHR10073:SF12 none none IPR011186

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting